RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 VCX3BQ9H321 246 aa9.34□□□□□ -0.91
CCDC12-204ENST00000460035 ADGRL4Q9HBW9 690 aa9.34□□□□□ -0.91
CCDC12-204ENST00000460035 DDX28Q9NUL7 540 aaKnown RBP9.34□□□□□ -0.91
CCDC12-204ENST00000460035 TBCCD1Q9NVR7 557 aa9.34□□□□□ -0.91
CCDC12-204ENST00000460035 BEX4Q9NWD9 120 aaPredicted RBP9.34□□□□□ -0.91
CCDC12-204ENST00000460035 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.34□□□□□ -0.91
CCDC12-204ENST00000460035 STARD10Q9Y365 291 aa9.34□□□□□ -0.91
CCDC12-204ENST00000460035 PMF1-BGLAPU3KQ54 211 aa9.34□□□□□ -0.91
CCDC12-204ENST00000460035 MED13LQ71F56 2210 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 A0A1W2PPW3 197 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 TMEM129A0AVI4 362 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 ZNF878C9JN71 531 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 H0YJX3 145 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 J3QW42 95 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 M0R135 149 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 APOL3O95236 402 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 CLPTM1O96005 669 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 SBK2P0C263 348 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 ACSM4P0C7M7 580 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 GABRB1P18505 474 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 ALOX5APP20292 161 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 HSD11B1P28845 292 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 OTX1P32242 354 aaPredicted RBP9.33□□□□□ -0.92
CCDC12-204ENST00000460035 CAPGP40121 348 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 MTNR1AP48039 350 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 RGS6P49758 472 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 GRB2P62993 217 aaKnown RBP9.33□□□□□ -0.92
CCDC12-204ENST00000460035 ADARB1P78563 741 aaKnown RBP9.33□□□□□ -0.92
CCDC12-204ENST00000460035 EFNB3Q15768 340 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 MSMPQ1L6U9 139 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 SWI5Q1ZZU3 235 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 RFPL4BQ6ZWI9 263 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 SLC35F2Q8IXU6 374 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 SETD9Q8NE22 299 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 OR5L1Q8NGL2 311 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 RNF133Q8WVZ7 376 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 APOBEC3DQ96AK3 386 aaPredicted RBP9.33□□□□□ -0.92
CCDC12-204ENST00000460035 CMBLQ96DG6 245 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 RNFT2Q96EX2 444 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 TRMT61AQ96FX7 289 aaKnown RBP9.33□□□□□ -0.92
CCDC12-204ENST00000460035 PERPQ96FX8 193 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 ZNF799Q96GE5 643 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 TBX5Q99593 518 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 DOK1Q99704 481 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 KCNJ15Q99712 375 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 VRK1Q99986 396 aaPredicted RBP9.33□□□□□ -0.92
CCDC12-204ENST00000460035 ADI1Q9BV57 179 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 CACNG6Q9BXT2 260 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 DYNLRB1Q9NP97 96 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 PTTG3PQ9NZH4 202 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 TAAR3PQ9P1P4 343 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 KLHDC2Q9Y2U9 406 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 TMEM14AQ9Y6G1 99 aa9.33□□□□□ -0.92
CCDC12-204ENST00000460035 ITPR3Q14573 2671 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 DYSFO75923 2080 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 ZNF670-ZNF695F2Z2N8 137 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 H0YAE9 185 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 H3BSA7 217 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 OVOL3O00110 214 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 PSMD9O00233 223 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 ANXA2P07355 339 aaKnown RBP9.32□□□□□ -0.92
CCDC12-204ENST00000460035 ADRA2AP08913 450 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 SLC2A1P11166 492 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 ZNF250P15622 560 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 PAX1P15863 534 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 TUBG1P23258 451 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 MPV17P39210 176 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 ALDH3B1P43353 468 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 CX3CR1P49238 355 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 ART1P52961 327 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 ATP5J2P56134 94 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 KLF3P57682 345 aaPredicted RBP9.32□□□□□ -0.92
CCDC12-204ENST00000460035 CXCR4P61073 352 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 POU4F2Q12837 409 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 IL18R1Q13478 541 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 MAD2L1BPQ15013 274 aaPredicted RBP9.32□□□□□ -0.92
CCDC12-204ENST00000460035 MOGQ16653 247 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 NKPD1Q17RQ9 610 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 ALKBH6Q3KRA9 238 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 ZNF691Q5VV52 312 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 C11orf71Q6IPW1 123 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 KCTD18Q6PI47 426 aaPredicted RBP9.32□□□□□ -0.92
CCDC12-204ENST00000460035 LRRN1Q6UXK5 716 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 OR10H4Q8NGA5 316 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 KLF14Q8TD94 323 aaPredicted RBP9.32□□□□□ -0.92
CCDC12-204ENST00000460035 ASB17Q8WXJ9 295 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 MARS2Q96GW9 593 aaKnown RBP9.32□□□□□ -0.92
CCDC12-204ENST00000460035 COG8Q96MW5 612 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 MNTQ99583 582 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 MROQ9BYG7 248 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 TTTY10Q9BZA0 68 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 POFUT1Q9H488 388 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 AMBNQ9NP70 447 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 BRD7Q9NPI1 651 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 TUBG2Q9NRH3 451 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 SLCO1C1Q9NYB5 712 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 GPR160Q9UJ42 338 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 IKZF2Q9UKS7 526 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 COPS3Q9UNS2 423 aa9.32□□□□□ -0.92
CCDC12-204ENST00000460035 DOCK11Q5JSL3 2073 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms