RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 CACNG2Q9Y698 323 aa13.68□□□□□ -0.22
COL7A1-203ENST00000459756 SOX14O95416 240 aa13.67□□□□□ -0.22
COL7A1-203ENST00000459756 IFNGP01579 166 aa13.67□□□□□ -0.22
COL7A1-203ENST00000459756 PYCR1P32322 319 aa13.67□□□□□ -0.22
COL7A1-203ENST00000459756 THBS2P35442 1172 aa13.67□□□□□ -0.22
COL7A1-203ENST00000459756 TNFAIP6P98066 277 aaPredicted RBP13.67□□□□□ -0.22
COL7A1-203ENST00000459756 MVKQ03426 396 aa13.67□□□□□ -0.22
COL7A1-203ENST00000459756 RSPO1Q2MKA7 263 aaPredicted RBP13.67□□□□□ -0.22
COL7A1-203ENST00000459756 AVPI1Q5T686 147 aa13.67□□□□□ -0.22
COL7A1-203ENST00000459756 ASRGL1Q7L266 308 aa13.67□□□□□ -0.22
COL7A1-203ENST00000459756 GLCCI1Q86VQ1 547 aa13.67□□□□□ -0.22
COL7A1-203ENST00000459756 OR2Z1Q8NG97 314 aa13.67□□□□□ -0.22
COL7A1-203ENST00000459756 GIPC3Q8TF64 312 aa13.67□□□□□ -0.22
COL7A1-203ENST00000459756 FEVQ99581 238 aa13.67□□□□□ -0.22
COL7A1-203ENST00000459756 MDFIQ99750 246 aa13.67□□□□□ -0.22
COL7A1-203ENST00000459756 RBM4Q9BWF3 364 aaKnown RBP13.67□□□□□ -0.22
COL7A1-203ENST00000459756 MMADHCQ9H3L0 296 aaPredicted RBP13.67□□□□□ -0.22
COL7A1-203ENST00000459756 ARMC1Q9NVT9 282 aa13.67□□□□□ -0.22
COL7A1-203ENST00000459756 TMEFF2Q9UIK5 374 aaPredicted RBP13.67□□□□□ -0.22
COL7A1-203ENST00000459756 WIPI2Q9Y4P8 454 aa13.67□□□□□ -0.22
COL7A1-203ENST00000459756 TANC2Q9HCD6 1990 aa13.66□□□□□ -0.22
COL7A1-203ENST00000459756 RIIAD1A6NNX1 92 aa13.66□□□□□ -0.22
COL7A1-203ENST00000459756 GNGT2O14610 69 aa13.66□□□□□ -0.22
COL7A1-203ENST00000459756 SURF4O15260 269 aa13.66□□□□□ -0.22
COL7A1-203ENST00000459756 ACSM4P0C7M7 580 aa13.66□□□□□ -0.22
COL7A1-203ENST00000459756 ANPEPP15144 967 aa13.66□□□□□ -0.22
COL7A1-203ENST00000459756 TNFRSF1AP19438 455 aa13.66□□□□□ -0.22
COL7A1-203ENST00000459756 SLC25A1P53007 311 aa13.66□□□□□ -0.22
COL7A1-203ENST00000459756 CRMP1Q14194 572 aa13.66□□□□□ -0.22
COL7A1-203ENST00000459756 HLXQ14774 488 aaPredicted RBP13.66□□□□□ -0.22
COL7A1-203ENST00000459756 Q6ZR03 302 aa13.66□□□□□ -0.22
COL7A1-203ENST00000459756 COLCA1Q6ZS62 124 aa13.66□□□□□ -0.22
COL7A1-203ENST00000459756 IL17RELQ6ZVW7 336 aa13.66□□□□□ -0.22
COL7A1-203ENST00000459756 PEG10Q86TG7 708 aaKnown RBP13.66□□□□□ -0.22
COL7A1-203ENST00000459756 OR4Q3Q8NH05 313 aa13.66□□□□□ -0.22
COL7A1-203ENST00000459756 TEX47Q8TBZ9 253 aa13.66□□□□□ -0.22
COL7A1-203ENST00000459756 RAB39BQ96DA2 213 aa13.66□□□□□ -0.22
COL7A1-203ENST00000459756 NIPSNAP1Q9BPW8 284 aa13.66□□□□□ -0.22
COL7A1-203ENST00000459756 C1QTNF5Q9BXJ0 243 aa13.66□□□□□ -0.22
COL7A1-203ENST00000459756 NMNAT2Q9BZQ4 307 aa13.66□□□□□ -0.22
COL7A1-203ENST00000459756 YY1AP1Q9H869 796 aa13.66□□□□□ -0.22
COL7A1-203ENST00000459756 PNRC2Q9NPJ4 139 aaKnown RBP13.66□□□□□ -0.22
COL7A1-203ENST00000459756 PTTG3PQ9NZH4 202 aa13.66□□□□□ -0.22
COL7A1-203ENST00000459756 COL6A5A8TX70 2615 aa13.66□□□□□ -0.22
COL7A1-203ENST00000459756 FAM157AC9JC47 383 aa13.65□□□□□ -0.22
COL7A1-203ENST00000459756 F5H5K5 113 aa13.65□□□□□ -0.22
COL7A1-203ENST00000459756 MSMBP08118 114 aa13.65□□□□□ -0.22
COL7A1-203ENST00000459756 ZNF3P17036 446 aa13.65□□□□□ -0.22
COL7A1-203ENST00000459756 FMO3P31513 532 aa13.65□□□□□ -0.22
COL7A1-203ENST00000459756 BLVRAP53004 296 aa13.65□□□□□ -0.22
COL7A1-203ENST00000459756 TPTEP56180 551 aa13.65□□□□□ -0.22
COL7A1-203ENST00000459756 SLC27A4Q6P1M0 643 aa13.65□□□□□ -0.22
COL7A1-203ENST00000459756 OR51L1Q8NGJ5 315 aa13.65□□□□□ -0.22
COL7A1-203ENST00000459756 OR9Q1Q8NGQ5 310 aa13.65□□□□□ -0.22
COL7A1-203ENST00000459756 OR51F2Q8NH61 342 aa13.65□□□□□ -0.22
COL7A1-203ENST00000459756 ZNRF4Q8WWF5 429 aa13.65□□□□□ -0.22
COL7A1-203ENST00000459756 UTP4Q969X6 686 aaKnown RBP13.65□□□□□ -0.22
COL7A1-203ENST00000459756 TMEM186Q96B77 213 aa13.65□□□□□ -0.22
COL7A1-203ENST00000459756 MAP6Q96JE9 813 aa13.65□□□□□ -0.22
COL7A1-203ENST00000459756 ZNF582Q96NG8 517 aaPredicted RBP13.65□□□□□ -0.22
COL7A1-203ENST00000459756 HCAR1Q9BXC0 346 aa13.65□□□□□ -0.22
COL7A1-203ENST00000459756 ZNF665Q9H7R5 613 aa13.65□□□□□ -0.22
COL7A1-203ENST00000459756 CMC2Q9NRP2 79 aa13.65□□□□□ -0.22
COL7A1-203ENST00000459756 IL19Q9UHD0 177 aa13.65□□□□□ -0.22
COL7A1-203ENST00000459756 COMMD3-BMI1R4GMX3 469 aa13.65□□□□□ -0.22
COL7A1-203ENST00000459756 TCRBV3S1A0A5B6 114 aa13.64□□□□□ -0.23
COL7A1-203ENST00000459756 TVP23AA6NH52 213 aa13.64□□□□□ -0.23
COL7A1-203ENST00000459756 H3BN98 237 aa13.64□□□□□ -0.23
COL7A1-203ENST00000459756 E2F6O75461 281 aa13.64□□□□□ -0.23
COL7A1-203ENST00000459756 SPI1P17947 270 aa13.64□□□□□ -0.23
COL7A1-203ENST00000459756 GABPB1Q06547 395 aaPredicted RBP13.64□□□□□ -0.23
COL7A1-203ENST00000459756 PCK2Q16822 640 aa13.64□□□□□ -0.23
COL7A1-203ENST00000459756 SPRNQ5BIV9 151 aa13.64□□□□□ -0.23
COL7A1-203ENST00000459756 OR2T2Q6IF00 324 aa13.64□□□□□ -0.23
COL7A1-203ENST00000459756 ACSM5Q6NUN0 579 aa13.64□□□□□ -0.23
COL7A1-203ENST00000459756 OR5AS1Q8N127 324 aa13.64□□□□□ -0.23
COL7A1-203ENST00000459756 OR8G5Q8NG78 346 aa13.64□□□□□ -0.23
COL7A1-203ENST00000459756 OR13G1Q8NGZ3 307 aa13.64□□□□□ -0.23
COL7A1-203ENST00000459756 SPTSSAQ969W0 71 aa13.64□□□□□ -0.23
COL7A1-203ENST00000459756 LPAR2Q9HBW0 351 aa13.64□□□□□ -0.23
COL7A1-203ENST00000459756 DDX28Q9NUL7 540 aaKnown RBP13.64□□□□□ -0.23
COL7A1-203ENST00000459756 HIF1ANQ9NWT6 349 aa13.64□□□□□ -0.23
COL7A1-203ENST00000459756 PDP1Q9P0J1 537 aaPredicted RBP13.64□□□□□ -0.23
COL7A1-203ENST00000459756 TRAV20A0A0B4J274 112 aa13.63□□□□□ -0.23
COL7A1-203ENST00000459756 IQCF6A8MYZ5 107 aa13.63□□□□□ -0.23
COL7A1-203ENST00000459756 FKBP6O75344 327 aa13.63□□□□□ -0.23
COL7A1-203ENST00000459756 DEAF1O75398 565 aaPredicted RBP13.63□□□□□ -0.23
COL7A1-203ENST00000459756 LCATP04180 440 aa13.63□□□□□ -0.23
COL7A1-203ENST00000459756 GYPBP06028 91 aa13.63□□□□□ -0.23
COL7A1-203ENST00000459756 SELEP16581 610 aa13.63□□□□□ -0.23
COL7A1-203ENST00000459756 GRK5P34947 590 aa13.63□□□□□ -0.23
COL7A1-203ENST00000459756 RPS27P42677 84 aaKnown RBP13.63□□□□□ -0.23
COL7A1-203ENST00000459756 ENTPD1P49961 510 aa13.63□□□□□ -0.23
COL7A1-203ENST00000459756 MALLQ13021 153 aa13.63□□□□□ -0.23
COL7A1-203ENST00000459756 TEX30Q5JUR7 227 aa13.63□□□□□ -0.23
COL7A1-203ENST00000459756 LYPD4Q6UWN0 246 aa13.63□□□□□ -0.23
COL7A1-203ENST00000459756 CXXC5Q7LFL8 322 aaKnown RBP13.63□□□□□ -0.23
COL7A1-203ENST00000459756 TMEM179BQ7Z7N9 219 aa13.63□□□□□ -0.23
COL7A1-203ENST00000459756 ATG16L2Q8NAA4 619 aa13.63□□□□□ -0.23
COL7A1-203ENST00000459756 PAPD5Q8NDF8 572 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms