RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 PNLDC1Q8NA58 520 aaKnown RBP7.89□□□□□ -1.15
HDAC3-202ENST00000459727 STEAP2Q8NFT2 490 aa7.89□□□□□ -1.15
HDAC3-202ENST00000459727 OR5M9Q8NGP3 310 aa7.89□□□□□ -1.15
HDAC3-202ENST00000459727 OR5M1Q8NGP8 315 aa7.89□□□□□ -1.15
HDAC3-202ENST00000459727 C11orf40Q8WZ69 217 aa7.89□□□□□ -1.15
HDAC3-202ENST00000459727 ATOH1Q92858 354 aaPredicted RBP7.89□□□□□ -1.15
HDAC3-202ENST00000459727 ZNF524Q96C55 264 aa7.89□□□□□ -1.15
HDAC3-202ENST00000459727 OXGR1Q96P68 337 aa7.89□□□□□ -1.15
HDAC3-202ENST00000459727 PDCD10Q9BUL8 212 aa7.89□□□□□ -1.15
HDAC3-202ENST00000459727 MRPL13Q9BYD1 178 aaKnown RBP7.89□□□□□ -1.15
HDAC3-202ENST00000459727 PBOV1Q9GZY1 135 aa7.89□□□□□ -1.15
HDAC3-202ENST00000459727 WDR54Q9H977 334 aa7.89□□□□□ -1.15
HDAC3-202ENST00000459727 CENPMQ9NSP4 180 aa7.89□□□□□ -1.15
HDAC3-202ENST00000459727 SDHAF2Q9NX18 166 aa7.89□□□□□ -1.15
HDAC3-202ENST00000459727 CA14Q9ULX7 337 aa7.89□□□□□ -1.15
HDAC3-202ENST00000459727 SCN2AQ99250 2005 aa7.89□□□□□ -1.15
HDAC3-202ENST00000459727 REV3LO60673 3130 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 A0A0B4J2A0 478 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 CCDC163A0A0D9SF12 145 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 DCDC2BA2VCK2 349 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 MFSD2BA6NFX1 497 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 ZNF726A6NNF4 738 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 NUDT19A8MXV4 375 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 DNPH1O43598 174 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 PRKNO60260 465 aaPredicted RBP7.88□□□□□ -1.15
HDAC3-202ENST00000459727 EIF1BO60739 113 aaKnown RBP7.88□□□□□ -1.15
HDAC3-202ENST00000459727 CA11O75493 328 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 SCRG1O75711 98 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 VAMP5O95183 116 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 GPANK1O95872 356 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 HLA-AP01891 365 aaKnown RBP7.88□□□□□ -1.15
HDAC3-202ENST00000459727 TTRP02766 147 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 FCER2P06734 321 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 NMBP08949 121 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 CD63P08962 238 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 PET100P0DJ07 73 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 FOSL2P15408 326 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 CCL1P22362 96 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 ZNF93P35789 620 aaPredicted RBP7.88□□□□□ -1.15
HDAC3-202ENST00000459727 CLDN6P56747 220 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 H2BFSP57053 126 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 FBXW4P57775 412 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 LSM6P62312 80 aaKnown RBP7.88□□□□□ -1.15
HDAC3-202ENST00000459727 GABREP78334 506 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 GUCA2AQ02747 115 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 CFHR1Q03591 330 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 SPOCK1Q08629 439 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 DHRS2Q13268 280 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 SMAD2Q15796 467 aaKnown RBP7.88□□□□□ -1.15
HDAC3-202ENST00000459727 EXT1Q16394 746 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 ZNF260Q3ZCT1 412 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 PLEKHN1Q494U1 663 aaPredicted RBP7.88□□□□□ -1.15
HDAC3-202ENST00000459727 CDNFQ49AH0 187 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 VAX1Q5SQQ9 334 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 ATPAF1Q5TC12 328 aaPredicted RBP7.88□□□□□ -1.15
HDAC3-202ENST00000459727 STPG1Q5TH74 334 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 NSUN5P2Q63ZY6 315 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 ASPHD2Q6ICH7 369 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 KANSL1Q7Z3B3 1105 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 TRAPPC6BQ86SZ2 158 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 ZNF546Q86UE3 836 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 PRSS58Q8IYP2 241 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 KCNRGQ8N5I3 272 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 OR4K17Q8NGC6 315 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 OR56B1Q8NGI3 324 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 OR52B4Q8NGK2 314 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 OR10R2Q8NGX6 335 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 OR8S1Q8NH09 359 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 THAP6Q8TBB0 222 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 MITD1Q8WV92 249 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 INTS12Q96CB8 462 aaKnown RBP7.88□□□□□ -1.15
HDAC3-202ENST00000459727 SPACA9Q96E40 222 aaPredicted RBP7.88□□□□□ -1.15
HDAC3-202ENST00000459727 GUCD1Q96NT3 240 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 CRB3Q9BUF7 120 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 B3GNT4Q9C0J1 378 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 CST11Q9H112 138 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 UBE2ZQ9H832 354 aaPredicted RBP7.88□□□□□ -1.15
HDAC3-202ENST00000459727 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.88□□□□□ -1.15
HDAC3-202ENST00000459727 MYOTQ9UBF9 498 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 CGGBP1Q9UFW8 167 aaPredicted RBP7.88□□□□□ -1.15
HDAC3-202ENST00000459727 SHPKQ9UHJ6 478 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 ANAPC10Q9UM13 185 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 NOP16Q9Y3C1 178 aaKnown RBP7.88□□□□□ -1.15
HDAC3-202ENST00000459727 B3GALT1Q9Y5Z6 326 aa7.88□□□□□ -1.15
HDAC3-202ENST00000459727 MRPS18BQ9Y676 258 aaKnown RBP7.88□□□□□ -1.15
HDAC3-202ENST00000459727 A0A087WV48 116 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 OR5H14A6NHG9 310 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 AQP7P3A6NL99 342 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 GJE1A6NN92 205 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 TMEM14DPA8MWL7 114 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 RAB27BO00194 218 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 P2RY10O00398 339 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 BCL2L11O43521 198 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 MTRF1O75570 445 aaKnown RBP7.87□□□□□ -1.15
HDAC3-202ENST00000459727 STK17BO94768 372 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 DUS4LO95620 317 aaKnown RBP7.87□□□□□ -1.15
HDAC3-202ENST00000459727 WDPCPO95876 746 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 CFDP00746 253 aaPredicted RBP7.87□□□□□ -1.15
HDAC3-202ENST00000459727 ZNF735P0CB33 412 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 PGA4P0DJD7 388 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms