RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 PSMA6P60900 246 aaKnown RBP5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 RPS25P62851 125 aaKnown RBP5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 MXD1Q05195 221 aa5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 MZT1Q08AG7 82 aa5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 DYNC1I2Q13409 638 aaKnown RBP5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 DOC2BQ14184 412 aa5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 MOGQ16653 247 aa5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 ZNF404Q494X3 552 aa5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 ZMAT1Q5H9K5 638 aa5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 PABPC1L2AQ5JQF8 200 aa5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 DDI2Q5TDH0 399 aa5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 DMKNQ6E0U4 476 aaPredicted RBP5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 LYPD4Q6UWN0 246 aa5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 LINC00299Q6ZSB3 139 aa5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 FAM57BQ71RH2 274 aa5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 MRPL21Q7Z2W9 205 aaKnown RBP5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 NUFIP2Q7Z417 695 aaKnown RBP5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 MRGPRGQ86SM5 289 aa5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 ADGRE4PQ86SQ3 457 aa5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 LIX1LQ8IVB5 337 aa5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 ELMOD2Q8IZ81 293 aa5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 ZNF433Q8N7K0 673 aaPredicted RBP5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 OR1K1Q8NGR3 316 aa5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 ST7LQ8TDW4 575 aa5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 CA5BP1Q8WTZ4 195 aa5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 SMAP2Q8WU79 429 aaPredicted RBP5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 C15orf40Q8WUR7 153 aa5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 TMEM106AQ96A25 262 aa5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 APOBEC3DQ96AK3 386 aaPredicted RBP5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 C10orf35Q96D05 121 aa5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 TECTBQ96PL2 329 aa5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 GPER1Q99527 375 aa5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 DOK1Q99704 481 aa5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 SLX1AQ9BQ83 275 aa5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 MED18Q9BUE0 208 aa5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 OR2H1Q9GZK4 316 aa5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 WDR12Q9GZL7 423 aaKnown RBP5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 PBOV1Q9GZY1 135 aa5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 CCDC59Q9P031 241 aaKnown RBP5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 FRRS1LQ9P0K9 344 aa5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 RABL2AQ9UBK7 228 aaPredicted RBP5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 NUFIP1Q9UHK0 495 aaKnown RBP5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 MRM2Q9UI43 246 aaKnown RBP5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 GPR160Q9UJ42 338 aa5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 ING1Q9UK53 422 aaPredicted RBP5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 COPS3Q9UNS2 423 aa5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 RABL2BQ9UNT1 228 aa5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 SLC7A11Q9UPY5 501 aa5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 NOP16Q9Y3C1 178 aaKnown RBP5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 LHFPL6Q9Y693 200 aa5.13□□□□□ -1.59
RNU1-88P-201ENST00000459274 NCOA6Q14686 2063 aaPredicted RBP5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 TRAV1-2A0A0B4J238 106 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 KRTAP4-8A0A0G2JLE6 195 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 GGT3PA6NGU5 568 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 C16orf97H3BN30 126 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 J3QW42 95 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 MAGEB4O15481 346 aaPredicted RBP5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 LRRTM2O43300 516 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 LYZL6O75951 148 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 ZFPL1O95159 310 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 CRYAAP02489 173 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 HCKP08631 526 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 SELEP16581 610 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 KLK2P20151 261 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 RAB3AP20336 220 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 DDOSTP39656 456 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 SOX2P48431 317 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 ZNF121P58317 390 aaPredicted RBP5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 NCS1P62166 190 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 RPS23P62266 143 aaKnown RBP5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 PITPNAQ00169 270 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 PSG4Q00888 419 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 FABP5Q01469 135 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 RIPPLY1Q0D2K3 151 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 LY6DQ14210 128 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 ENDOGQ14249 297 aaKnown RBP5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 ZNF846Q147U1 533 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 CNN3Q15417 329 aaKnown RBP5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 CTF1Q16619 201 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 ST3GAL2Q16842 350 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 TBRG1Q3YBR2 411 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 WDR38Q5JTN6 314 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 PHYHD1Q5SRE7 291 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 SFRP5Q5T4F7 317 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 IDNKQ5T6J7 187 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 ALKBH2Q6NS38 261 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 ZNF774Q6NX45 483 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 C16orf87Q6PH81 154 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 TFAP2EQ6VUC0 442 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 NHLRC1Q6VVB1 395 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 C3P1Q6ZMU1 363 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 FOXL2NBQ6ZUU3 175 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 ZNF627Q7L945 461 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 SSX6Q7RTT6 188 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 CATSPERDQ86XM0 798 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 DOLPP1Q86YN1 238 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 SKA3Q8IX90 412 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 NKAIN3Q8N8D7 197 aa5.12□□□□□ -1.59
RNU1-88P-201ENST00000459274 ZNF610Q8N9Z0 462 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms