RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 METTL21EPA6NDL7 271 aa13.37□□□□□ -0.27
LDLR-202ENST00000455727 ZNF726A6NNF4 738 aa13.37□□□□□ -0.27
LDLR-202ENST00000455727 TLX3O43711 291 aaPredicted RBP13.37□□□□□ -0.27
LDLR-202ENST00000455727 TSC22D2O75157 780 aa13.37□□□□□ -0.27
LDLR-202ENST00000455727 NR2C1P13056 603 aa13.37□□□□□ -0.27
LDLR-202ENST00000455727 SFTPDP35247 375 aa13.37□□□□□ -0.27
LDLR-202ENST00000455727 EIF1AXP47813 144 aaKnown RBP13.37□□□□□ -0.27
LDLR-202ENST00000455727 CLDN6P56747 220 aa13.37□□□□□ -0.27
LDLR-202ENST00000455727 GABREP78334 506 aa13.37□□□□□ -0.27
LDLR-202ENST00000455727 PMPCAQ10713 525 aa13.37□□□□□ -0.27
LDLR-202ENST00000455727 MFAP5Q13361 173 aa13.37□□□□□ -0.27
LDLR-202ENST00000455727 Q7L0L9 218 aa13.37□□□□□ -0.27
LDLR-202ENST00000455727 SLC22A24Q8N4F4 322 aa13.37□□□□□ -0.27
LDLR-202ENST00000455727 ZNF680Q8NEM1 530 aa13.37□□□□□ -0.27
LDLR-202ENST00000455727 OR2Y1Q8NGV0 311 aa13.37□□□□□ -0.27
LDLR-202ENST00000455727 CNTD2Q9H8S5 307 aa13.37□□□□□ -0.27
LDLR-202ENST00000455727 A0A1B0GTI1 187 aa13.36□□□□□ -0.27
LDLR-202ENST00000455727 OR2M5A3KFT3 312 aa13.36□□□□□ -0.27
LDLR-202ENST00000455727 TNFRSF10AO00220 468 aa13.36□□□□□ -0.27
LDLR-202ENST00000455727 CELA2AP08217 269 aa13.36□□□□□ -0.27
LDLR-202ENST00000455727 CCL4P13236 92 aa13.36□□□□□ -0.27
LDLR-202ENST00000455727 UXS1Q8NBZ7 420 aa13.36□□□□□ -0.27
LDLR-202ENST00000455727 OR1J2Q8NGS2 313 aa13.36□□□□□ -0.27
LDLR-202ENST00000455727 PAQR8Q8TEZ7 354 aa13.36□□□□□ -0.27
LDLR-202ENST00000455727 ADAT3Q96EY9 351 aaPredicted RBP13.36□□□□□ -0.27
LDLR-202ENST00000455727 GUCD1Q96NT3 240 aa13.36□□□□□ -0.27
LDLR-202ENST00000455727 SH2D2AQ9NP31 389 aa13.36□□□□□ -0.27
LDLR-202ENST00000455727 UPB1Q9UBR1 384 aa13.36□□□□□ -0.27
LDLR-202ENST00000455727 FBLN5Q9UBX5 448 aa13.36□□□□□ -0.27
LDLR-202ENST00000455727 POLR1DQ9Y2S0 133 aa13.36□□□□□ -0.27
LDLR-202ENST00000455727 MEIS3P1A6NDR6 274 aa13.36□□□□□ -0.27
LDLR-202ENST00000455727 PATE3B3GLJ2 98 aa13.36□□□□□ -0.27
LDLR-202ENST00000455727 BPNT1O95861 308 aa13.36□□□□□ -0.27
LDLR-202ENST00000455727 PDGFBP01127 241 aaPredicted RBP13.36□□□□□ -0.27
LDLR-202ENST00000455727 ITGB2P05107 769 aa13.36□□□□□ -0.27
LDLR-202ENST00000455727 ERCC1P07992 297 aaPredicted RBP13.36□□□□□ -0.27
LDLR-202ENST00000455727 QDPRP09417 244 aa13.36□□□□□ -0.27
LDLR-202ENST00000455727 SSR4P51571 173 aa13.36□□□□□ -0.27
LDLR-202ENST00000455727 MAML2Q8IZL2 1156 aaPredicted RBP13.36□□□□□ -0.27
LDLR-202ENST00000455727 ARMC10Q8N2F6 343 aa13.36□□□□□ -0.27
LDLR-202ENST00000455727 SLC25A21Q9BQT8 299 aaPredicted RBP13.36□□□□□ -0.27
LDLR-202ENST00000455727 TMPRSS13Q9BYE2 586 aa13.36□□□□□ -0.27
LDLR-202ENST00000455727 CA10Q9NS85 328 aa13.36□□□□□ -0.27
LDLR-202ENST00000455727 RAMP1O60894 148 aa13.35□□□□□ -0.27
LDLR-202ENST00000455727 SCGNO76038 276 aa13.35□□□□□ -0.27
LDLR-202ENST00000455727 RAB3DO95716 219 aa13.35□□□□□ -0.27
LDLR-202ENST00000455727 CD74P04233 296 aa13.35□□□□□ -0.27
LDLR-202ENST00000455727 RAB3AP20336 220 aa13.35□□□□□ -0.27
LDLR-202ENST00000455727 CDAP32320 146 aa13.35□□□□□ -0.27
LDLR-202ENST00000455727 GNALP38405 381 aa13.35□□□□□ -0.27
LDLR-202ENST00000455727 ZNF81P51508 661 aa13.35□□□□□ -0.27
LDLR-202ENST00000455727 DSCR4P56555 118 aaPredicted RBP13.35□□□□□ -0.27
LDLR-202ENST00000455727 AQP3Q92482 292 aa13.35□□□□□ -0.27
LDLR-202ENST00000455727 PROK2Q9HC23 129 aa13.35□□□□□ -0.27
LDLR-202ENST00000455727 MYOZ1Q9NP98 299 aaPredicted RBP13.35□□□□□ -0.27
LDLR-202ENST00000455727 PNRC2Q9NPJ4 139 aaKnown RBP13.35□□□□□ -0.27
LDLR-202ENST00000455727 PRDM6Q9NQX0 595 aa13.35□□□□□ -0.27
LDLR-202ENST00000455727 SLC5A6Q9Y289 635 aa13.35□□□□□ -0.27
LDLR-202ENST00000455727 EIF1BO60739 113 aaKnown RBP13.35□□□□□ -0.27
LDLR-202ENST00000455727 SLC22A5O76082 557 aa13.35□□□□□ -0.27
LDLR-202ENST00000455727 VAMP5O95183 116 aa13.35□□□□□ -0.27
LDLR-202ENST00000455727 CYB5AP00167 134 aa13.35□□□□□ -0.27
LDLR-202ENST00000455727 RLN1P04808 185 aa13.35□□□□□ -0.27
LDLR-202ENST00000455727 LIFP15018 202 aa13.35□□□□□ -0.27
LDLR-202ENST00000455727 C4BPBP20851 252 aa13.35□□□□□ -0.27
LDLR-202ENST00000455727 GSK3AP49840 483 aa13.35□□□□□ -0.27
LDLR-202ENST00000455727 LSM6P62312 80 aaKnown RBP13.35□□□□□ -0.27
LDLR-202ENST00000455727 QRFPP83859 136 aa13.35□□□□□ -0.27
LDLR-202ENST00000455727 TAF13Q15543 124 aa13.35□□□□□ -0.27
LDLR-202ENST00000455727 CARD17Q5XLA6 110 aa13.35□□□□□ -0.27
LDLR-202ENST00000455727 SLC23A3Q6PIS1 610 aa13.35□□□□□ -0.27
LDLR-202ENST00000455727 FTMTQ8N4E7 242 aa13.35□□□□□ -0.27
LDLR-202ENST00000455727 PAQR4Q8N4S7 273 aaPredicted RBP13.35□□□□□ -0.27
LDLR-202ENST00000455727 OR52N4Q8NGI2 321 aa13.35□□□□□ -0.27
LDLR-202ENST00000455727 OR8S1Q8NH09 359 aa13.35□□□□□ -0.27
LDLR-202ENST00000455727 NUDT16L1Q9BRJ7 211 aaKnown RBP13.35□□□□□ -0.27
LDLR-202ENST00000455727 CLEC4MQ9H2X3 399 aaPredicted RBP13.35□□□□□ -0.27
LDLR-202ENST00000455727 ASH2LQ9UBL3 628 aa13.35□□□□□ -0.27
LDLR-202ENST00000455727 PLSCR5A0PG75 271 aa13.34□□□□□ -0.27
LDLR-202ENST00000455727 RAB27BO00194 218 aa13.34□□□□□ -0.27
LDLR-202ENST00000455727 CTSSP25774 331 aa13.34□□□□□ -0.27
LDLR-202ENST00000455727 ZNF133P52736 654 aaPredicted RBP13.34□□□□□ -0.27
LDLR-202ENST00000455727 TSPAN5P62079 268 aa13.34□□□□□ -0.27
LDLR-202ENST00000455727 POU4F3Q15319 338 aa13.34□□□□□ -0.27
LDLR-202ENST00000455727 MOGAT2Q3SYC2 334 aa13.34□□□□□ -0.27
LDLR-202ENST00000455727 OR10K2Q6IF99 312 aa13.34□□□□□ -0.27
LDLR-202ENST00000455727 RPS19BP1Q86WX3 136 aaKnown RBP13.34□□□□□ -0.27
LDLR-202ENST00000455727 C17orf50Q8WW18 174 aa13.34□□□□□ -0.27
LDLR-202ENST00000455727 ASB13Q8WXK3 278 aa13.34□□□□□ -0.27
LDLR-202ENST00000455727 DVL3Q92997 716 aaPredicted RBP13.34□□□□□ -0.27
LDLR-202ENST00000455727 CHIAQ9BZP6 476 aa13.34□□□□□ -0.27
LDLR-202ENST00000455727 CDCP1Q9H5V8 836 aa13.34□□□□□ -0.27
LDLR-202ENST00000455727 GLTPQ9NZD2 209 aa13.34□□□□□ -0.27
LDLR-202ENST00000455727 TOXO94900 526 aa13.34□□□□□ -0.27
LDLR-202ENST00000455727 IGHEP01854 428 aa13.34□□□□□ -0.27
LDLR-202ENST00000455727 CCL3P10147 92 aa13.34□□□□□ -0.27
LDLR-202ENST00000455727 CCL1P22362 96 aa13.34□□□□□ -0.27
LDLR-202ENST00000455727 MLF1P58340 268 aa13.34□□□□□ -0.27
LDLR-202ENST00000455727 GRB2P62993 217 aaKnown RBP13.34□□□□□ -0.27
LDLR-202ENST00000455727 MPPED2Q15777 294 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms