RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 CHMP5Q9NZZ3 219 aa2.42□□□□□ -2.02
VPS8-211ENST00000452140 UXTQ9UBK9 157 aaPredicted RBP2.42□□□□□ -2.02
VPS8-211ENST00000452140 BCORL1Q5H9F3 1711 aa2.42□□□□□ -2.02
VPS8-211ENST00000452140 ATRXP46100 2492 aa2.42□□□□□ -2.02
VPS8-211ENST00000452140 NCOA3Q9Y6Q9 1424 aa2.42□□□□□ -2.02
VPS8-211ENST00000452140 MROH7-TTC4A0A0A0MT08 1334 aa2.42□□□□□ -2.02
VPS8-211ENST00000452140 NACAE9PAV3 2078 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 ARHGAP21Q5T5U3 1957 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 KIF21AQ7Z4S6 1674 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 NEURL4Q96JN8 1562 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 BRD4O60885 1362 aaPredicted RBP2.41□□□□□ -2.02
VPS8-211ENST00000452140 IGHV3-74A0A0B4J1X5 117 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 A0A0J9YYE9 177 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 TRBV11-1A0A0K0K1C0 115 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 A0A1B0GUH1 482 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 A0A1B0GVX0 72 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 A0A1B0GW55 424 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 A0A1W2PP18 115 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 SIVA1O15304 175 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 ZNF324O75467 553 aaPredicted RBP2.41□□□□□ -2.02
VPS8-211ENST00000452140 MED6O75586 246 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 SCELO95171 688 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 TRBC1P01850 177 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 APOA1P02647 267 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 BCHEP06276 602 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 UBCP0CG48 685 aaKnown RBP2.41□□□□□ -2.02
VPS8-211ENST00000452140 DUX4L2P0CJ85 424 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 DUX4L3P0CJ86 424 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 DUX4L5P0CJ88 424 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 DUX4L6P0CJ89 424 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 DUX4L7P0CJ90 424 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 OR5H8P0DN80 308 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 PGAM1P18669 254 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 MSNP26038 577 aaKnown RBP2.41□□□□□ -2.02
VPS8-211ENST00000452140 STOMP27105 288 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 HMOX2P30519 316 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 RRM2P31350 389 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 FOXN2P32314 431 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 GPX4P36969 197 aaPredicted RBP2.41□□□□□ -2.02
VPS8-211ENST00000452140 CEACAM3P40198 252 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 SLC1A1P43005 524 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 CSNK1A1P48729 337 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 CRISP1P54107 249 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 LINC00315P59091 139 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 PFN3P60673 137 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 ADARB1P78563 741 aaKnown RBP2.41□□□□□ -2.02
VPS8-211ENST00000452140 SIGLEC14Q08ET2 396 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 TCP10Q12799 353 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 ZNF726P1Q15940 193 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 C22orf42Q6IC83 251 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 KRTAP5-2Q701N4 177 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 NDUFAF7Q7L592 441 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 SCD5Q86SK9 330 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 ZNF695Q8IW36 515 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 IQCKQ8N0W5 287 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 PGAM4Q8N0Y7 254 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 TMEM104Q8NE00 496 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 OR51L1Q8NGJ5 315 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 OR5W2Q8NH69 310 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 CA5BP1Q8WTZ4 195 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 PDCD6IPQ8WUM4 868 aaKnown RBP2.41□□□□□ -2.02
VPS8-211ENST00000452140 EXOSC8Q96B26 276 aaKnown RBP2.41□□□□□ -2.02
VPS8-211ENST00000452140 TM4SF18Q96CE8 201 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 PDXPQ96GD0 296 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 IL22Q9GZX6 179 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 LINC00597Q9H2U6 94 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 BEX1Q9HBH7 125 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 RETNQ9HD89 108 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 MRPS30Q9NP92 439 aaKnown RBP2.41□□□□□ -2.02
VPS8-211ENST00000452140 DYRK4Q9NR20 520 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 STX18Q9P2W9 335 aaKnown RBP2.41□□□□□ -2.02
VPS8-211ENST00000452140 CTSFQ9UBX1 484 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 DUX4Q9UBX2 424 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 GGA2Q9UJY4 613 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 KPTNQ9Y664 436 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 NCOA1Q15788 1441 aa2.41□□□□□ -2.02
VPS8-211ENST00000452140 SHROOM2Q13796 1616 aa2.4□□□□□ -2.03
VPS8-211ENST00000452140 SIRPB1O00241 398 aa2.4□□□□□ -2.03
VPS8-211ENST00000452140 POLR1CO15160 346 aaPredicted RBP2.4□□□□□ -2.03
VPS8-211ENST00000452140 KDELR3O43731 214 aa2.4□□□□□ -2.03
VPS8-211ENST00000452140 CHST1O43916 411 aa2.4□□□□□ -2.03
VPS8-211ENST00000452140 AIREO43918 545 aa2.4□□□□□ -2.03
VPS8-211ENST00000452140 FKBP6O75344 327 aa2.4□□□□□ -2.03
VPS8-211ENST00000452140 NDUFS6O75380 124 aaKnown RBP2.4□□□□□ -2.03
VPS8-211ENST00000452140 RDH16O75452 317 aa2.4□□□□□ -2.03
VPS8-211ENST00000452140 HLA-DPB1P04440 258 aa2.4□□□□□ -2.03
VPS8-211ENST00000452140 RETP07949 1114 aa2.4□□□□□ -2.03
VPS8-211ENST00000452140 OTX1P32242 354 aaPredicted RBP2.4□□□□□ -2.03
VPS8-211ENST00000452140 PSMD4P55036 377 aaKnown RBP2.4□□□□□ -2.03
VPS8-211ENST00000452140 ATP5J2P56134 94 aa2.4□□□□□ -2.03
VPS8-211ENST00000452140 MAP3K7CLP57077 242 aa2.4□□□□□ -2.03
VPS8-211ENST00000452140 RAB10P61026 200 aa2.4□□□□□ -2.03
VPS8-211ENST00000452140 STK38Q15208 465 aa2.4□□□□□ -2.03
VPS8-211ENST00000452140 SNRNP35Q16560 246 aaKnown RBP2.4□□□□□ -2.03
VPS8-211ENST00000452140 ARL9Q6T311 187 aa2.4□□□□□ -2.03
VPS8-211ENST00000452140 CERS6Q6ZMG9 384 aa2.4□□□□□ -2.03
VPS8-211ENST00000452140 ERO1BQ86YB8 467 aa2.4□□□□□ -2.03
VPS8-211ENST00000452140 LRRC8AQ8IWT6 810 aa2.4□□□□□ -2.03
VPS8-211ENST00000452140 RIMKLAQ8IXN7 391 aa2.4□□□□□ -2.03
VPS8-211ENST00000452140 SAXO1Q8IYX7 474 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms