RNA–Protein interactions for RNA: ENST00000450966.5

USP40-208, Transcript of ubiquitin specific peptidase 40, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP40, Length 5,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-208ENST00000450966 CHRM2P08172 466 aa12.14□□□□□ -0.47
USP40-208ENST00000450966 OR10J4P0C629 311 aa12.14□□□□□ -0.47
USP40-208ENST00000450966 GPX2P18283 190 aa12.14□□□□□ -0.47
USP40-208ENST00000450966 RGS7BPQ6MZT1 257 aaPredicted RBP12.14□□□□□ -0.47
USP40-208ENST00000450966 MAMDC2Q7Z304 686 aaPredicted RBP12.14□□□□□ -0.47
USP40-208ENST00000450966 MAP1LC3BQ9GZQ8 125 aa12.14□□□□□ -0.47
USP40-208ENST00000450966 FGF20Q9NP95 211 aaPredicted RBP12.14□□□□□ -0.47
USP40-208ENST00000450966 NAGKQ9UJ70 344 aa12.14□□□□□ -0.47
USP40-208ENST00000450966 HS3ST3A1Q9Y663 406 aa12.14□□□□□ -0.47
USP40-208ENST00000450966 MAST2Q6P0Q8 1798 aa12.14□□□□□ -0.47
USP40-208ENST00000450966 DDX60Q8IY21 1712 aaKnown RBP12.14□□□□□ -0.47
USP40-208ENST00000450966 PPP6CO00743 305 aa12.14□□□□□ -0.47
USP40-208ENST00000450966 RELQ04864 619 aaPredicted RBP12.14□□□□□ -0.47
USP40-208ENST00000450966 ELOBQ15370 118 aa12.14□□□□□ -0.47
USP40-208ENST00000450966 HLA-BQ31612 363 aa12.14□□□□□ -0.47
USP40-208ENST00000450966 LCN15Q6UWW0 184 aa12.14□□□□□ -0.47
USP40-208ENST00000450966 RANBP10Q6VN20 620 aa12.14□□□□□ -0.47
USP40-208ENST00000450966 SUMF1Q8NBK3 374 aa12.14□□□□□ -0.47
USP40-208ENST00000450966 OR11H7Q8NGC8 314 aa12.14□□□□□ -0.47
USP40-208ENST00000450966 OR4C16Q8NGL9 310 aa12.14□□□□□ -0.47
USP40-208ENST00000450966 FBXO17Q96EF6 278 aa12.14□□□□□ -0.47
USP40-208ENST00000450966 CHRDL1Q9BU40 450 aa12.14□□□□□ -0.47
USP40-208ENST00000450966 MYH3P11055 1940 aa12.14□□□□□ -0.47
USP40-208ENST00000450966 CXCL10P02778 98 aa12.14□□□□□ -0.47
USP40-208ENST00000450966 GP1BAP07359 652 aa12.14□□□□□ -0.47
USP40-208ENST00000450966 SELENOPP49908 381 aa12.14□□□□□ -0.47
USP40-208ENST00000450966 OR5B3Q8NH48 314 aa12.14□□□□□ -0.47
USP40-208ENST00000450966 SGCZQ96LD1 299 aa12.14□□□□□ -0.47
USP40-208ENST00000450966 MYADMQ96S97 322 aa12.14□□□□□ -0.47
USP40-208ENST00000450966 TMEM59Q9BXS4 323 aa12.14□□□□□ -0.47
USP40-208ENST00000450966 SMAD6O43541 496 aaKnown RBP12.14□□□□□ -0.47
USP40-208ENST00000450966 P2RX1P51575 399 aa12.14□□□□□ -0.47
USP40-208ENST00000450966 TMEM241Q24JQ0 296 aa12.14□□□□□ -0.47
USP40-208ENST00000450966 RCBTB1Q8NDN9 531 aa12.14□□□□□ -0.47
USP40-208ENST00000450966 OR4B1Q8NGF8 309 aa12.14□□□□□ -0.47
USP40-208ENST00000450966 PAM16Q9Y3D7 125 aa12.14□□□□□ -0.47
USP40-208ENST00000450966 AKR7A3O95154 331 aa12.14□□□□□ -0.47
USP40-208ENST00000450966 DCTDP32321 178 aa12.14□□□□□ -0.47
USP40-208ENST00000450966 GPR18Q14330 331 aa12.14□□□□□ -0.47
USP40-208ENST00000450966 MELKQ14680 651 aa12.14□□□□□ -0.47
USP40-208ENST00000450966 DCAF12Q5T6F0 453 aa12.14□□□□□ -0.47
USP40-208ENST00000450966 UBXN10Q96LJ8 280 aa12.14□□□□□ -0.47
USP40-208ENST00000450966 GPR55Q9Y2T6 319 aaPredicted RBP12.14□□□□□ -0.47
USP40-208ENST00000450966 MYH7P12883 1935 aa12.14□□□□□ -0.47
USP40-208ENST00000450966 TRAV1-2A0A0B4J238 106 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 GYPBP06028 91 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 NPBWR1P48145 328 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 UBE2G2P60604 165 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 C18orf21Q32NC0 220 aaPredicted RBP12.13□□□□□ -0.47
USP40-208ENST00000450966 FA2HQ7L5A8 372 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 LRP11Q86VZ4 500 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 MDGA1Q8NFP4 955 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 PEX11GQ96HA9 241 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 TBX21Q9UL17 535 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 USP3Q9Y6I4 520 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 DPP4P27487 766 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 P2RY2P41231 377 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 PAFAH1B2P68402 229 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 AGBL4Q5VU57 503 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 BCDIN3DQ7Z5W3 292 aaKnown RBP12.13□□□□□ -0.47
USP40-208ENST00000450966 SCD5Q86SK9 330 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 PRR14Q9BWN1 585 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 HDAC8Q9BY41 377 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 ACTR3CQ9C0K3 210 aaPredicted RBP12.13□□□□□ -0.47
USP40-208ENST00000450966 LTB4R2Q9NPC1 389 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 DUXBA0A1W2PPF3 345 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 FEZF1A0PJY2 475 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 DAOP14920 347 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 PRPH2P23942 346 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 INPP5JQ15735 1006 aaPredicted RBP12.13□□□□□ -0.47
USP40-208ENST00000450966 CLEC12BQ2HXU8 276 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 DHRS7BQ6IAN0 325 aaPredicted RBP12.13□□□□□ -0.47
USP40-208ENST00000450966 PSAPL1Q6NUJ1 521 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 OR4N5Q8IXE1 308 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 LINC00597Q9H2U6 94 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 TREX1Q9NSU2 369 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 ASIC5Q9NY37 505 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 ABHD16AO95870 558 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 SRFP11831 508 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 GLB1P16278 677 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 FUT1P19526 365 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 FAAP20Q6NZ36 180 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 FAHD2BQ6P2I3 314 aaPredicted RBP12.13□□□□□ -0.47
USP40-208ENST00000450966 KLHDC8AQ8IYD2 350 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 TMEM229BQ8NBD8 167 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 OR9A2Q8NGT5 310 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 CD200R1Q8TD46 325 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 APH1AQ96BI3 265 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 FAHD2AQ96GK7 314 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 OR5B2Q96R09 309 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 CDH20Q9HBT6 801 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 HCFC1R1Q9NWW0 138 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 UQCR10Q9UDW1 63 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 KCND3Q9UK17 655 aa12.13□□□□□ -0.47
USP40-208ENST00000450966 MYH13Q9UKX3 1938 aa12.12□□□□□ -0.47
USP40-208ENST00000450966 PHF1O43189 567 aaPredicted RBP12.12□□□□□ -0.47
USP40-208ENST00000450966 SLC22A6Q4U2R8 563 aa12.12□□□□□ -0.47
USP40-208ENST00000450966 ENTPD8Q5MY95 495 aa12.12□□□□□ -0.47
USP40-208ENST00000450966 SAMD13Q5VXD3 122 aa12.12□□□□□ -0.47
USP40-208ENST00000450966 OR2AE1Q8NHA4 323 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms