RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 PTBP1P26599 531 aaKnown RBP eCLIP9.54□□□□□ -0.882e-9■■■■□ 21.1
TOP3B-210ENST00000444502 VEGFCP49767 419 aa9.54□□□□□ -0.88
TOP3B-210ENST00000444502 FXYD6P3P58550 94 aa9.54□□□□□ -0.88
TOP3B-210ENST00000444502 LTBQ06643 244 aa9.54□□□□□ -0.88
TOP3B-210ENST00000444502 Q499Y3 187 aa9.54□□□□□ -0.88
TOP3B-210ENST00000444502 NDUFAF7Q7L592 441 aa9.54□□□□□ -0.88
TOP3B-210ENST00000444502 D2HGDHQ8N465 521 aa9.54□□□□□ -0.88
TOP3B-210ENST00000444502 BHLHE23Q8NDY6 225 aa9.54□□□□□ -0.88
TOP3B-210ENST00000444502 PXT1Q8NFP0 134 aa9.54□□□□□ -0.88
TOP3B-210ENST00000444502 SCARB1Q8WTV0 552 aa9.54□□□□□ -0.88
TOP3B-210ENST00000444502 APOBEC4Q8WW27 367 aaKnown RBP9.54□□□□□ -0.88
TOP3B-210ENST00000444502 HSD17B8Q92506 261 aa9.54□□□□□ -0.88
TOP3B-210ENST00000444502 RHOVQ96L33 236 aa9.54□□□□□ -0.88
TOP3B-210ENST00000444502 MYOTQ9UBF9 498 aa9.54□□□□□ -0.88
TOP3B-210ENST00000444502 GHRLQ9UBU3 117 aa9.54□□□□□ -0.88
TOP3B-210ENST00000444502 PILRBQ9UKJ0 227 aa9.54□□□□□ -0.88
TOP3B-210ENST00000444502 FBXL3Q9UKT7 428 aa9.54□□□□□ -0.88
TOP3B-210ENST00000444502 NOP16Q9Y3C1 178 aaKnown RBP9.54□□□□□ -0.88
TOP3B-210ENST00000444502 S100A11P31949 105 aa9.54□□□□□ -0.88
TOP3B-210ENST00000444502 PPIAP62937 165 aaKnown RBP9.54□□□□□ -0.88
TOP3B-210ENST00000444502 ACER2Q5QJU3 275 aa9.54□□□□□ -0.88
TOP3B-210ENST00000444502 STPG1Q5TH74 334 aa9.54□□□□□ -0.88
TOP3B-210ENST00000444502 CD276Q5ZPR3 534 aa9.54□□□□□ -0.88
TOP3B-210ENST00000444502 NPSR1Q6W5P4 371 aa9.54□□□□□ -0.88
TOP3B-210ENST00000444502 ANKRD37Q7Z713 158 aa9.54□□□□□ -0.88
TOP3B-210ENST00000444502 WDR5BQ86VZ2 330 aa9.54□□□□□ -0.88
TOP3B-210ENST00000444502 BVESQ8NE79 360 aa9.54□□□□□ -0.88
TOP3B-210ENST00000444502 OR5M9Q8NGP3 310 aa9.54□□□□□ -0.88
TOP3B-210ENST00000444502 VSTM2LQ96N03 204 aa9.54□□□□□ -0.88
TOP3B-210ENST00000444502 SARGQ9BW04 601 aa9.54□□□□□ -0.88
TOP3B-210ENST00000444502 ESRP2Q9H6T0 727 aaKnown RBP9.54□□□□□ -0.88
TOP3B-210ENST00000444502 WDR76Q9H967 626 aa9.54□□□□□ -0.88
TOP3B-210ENST00000444502 ADGRL4Q9HBW9 690 aa9.54□□□□□ -0.88
TOP3B-210ENST00000444502 KCNMB2Q9Y691 235 aa9.54□□□□□ -0.88
TOP3B-210ENST00000444502 UBL3O95164 117 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 ZNF16P17020 682 aaPredicted RBP9.53□□□□□ -0.88
TOP3B-210ENST00000444502 CSF2RBP32927 897 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 PRSS3P35030 304 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 APLNRP35414 380 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 TRA2AQ13595 282 aaKnown RBP eCLIP9.53□□□□□ -0.88
TOP3B-210ENST00000444502 SLC10A1Q14973 349 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 SLC22A6Q4U2R8 563 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 WDR74Q6RFH5 385 aaPredicted RBP9.53□□□□□ -0.88
TOP3B-210ENST00000444502 PLPP7Q8NBV4 271 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 MAFIPQ8WZ33 124 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 ROBO4Q8WZ75 1007 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 SMIM19Q96E16 107 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 SUCNR1Q9BXA5 334 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 PTTG3PQ9NZH4 202 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 KCNG2Q9UJ96 466 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 SLC22A13Q9Y226 551 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 EMC9Q9Y3B6 208 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 WIF1Q9Y5W5 379 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 A0A096LPE4 126 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 A0A1W2PPZ6 126 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 LNP1A1A4G5 178 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 MKRN2OSH3BPM6 223 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 F12P00748 615 aaPredicted RBP9.53□□□□□ -0.88
TOP3B-210ENST00000444502 NQO2P16083 231 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 MSX1P28360 303 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 SDHAP31040 664 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 CDKN2AP42771 156 aaKnown RBP9.53□□□□□ -0.88
TOP3B-210ENST00000444502 SNTB1Q13884 538 aaKnown RBP9.53□□□□□ -0.88
TOP3B-210ENST00000444502 EIF2S3LQ2VIR3 472 aaKnown RBP9.53□□□□□ -0.88
TOP3B-210ENST00000444502 AWAT2Q6E213 333 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 GLB1L2Q8IW92 636 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 BPIFCQ8NFQ6 507 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 C15orf40Q8WUR7 153 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 SGCZQ96LD1 299 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 ZNF442Q9H7R0 627 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 FBXO4Q9UKT5 387 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 MOKQ9UQ07 419 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 EXOGQ9Y2C4 368 aaKnown RBP9.53□□□□□ -0.88
TOP3B-210ENST00000444502 BRCA2P51587 3418 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 MTCL1Q9Y4B5 1905 aaKnown RBP9.53□□□□□ -0.88
TOP3B-210ENST00000444502 PHYHO14832 338 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 GDF9O60383 454 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 ZNF432O94892 652 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 THY1P04216 161 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 CRYBA1P05813 215 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 EDN3P14138 238 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 ATF1P18846 271 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 FAAP20Q6NZ36 180 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 KCTD9Q7L273 389 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 SLC16A9Q7RTY1 509 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 OR13C9Q8NGT0 318 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 CT55Q8WUE5 264 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 KCNE4Q8WWG9 221 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 DNASE2BQ8WZ79 361 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 ZFP64Q9NPA5 681 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 DLL4Q9NR61 685 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 F5H0A9 414 aaPredicted RBP9.53□□□□□ -0.88
TOP3B-210ENST00000444502 GATCO43716 136 aaKnown RBP9.53□□□□□ -0.88
TOP3B-210ENST00000444502 IFNA4P05014 189 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 CT45A8P0DMV1 189 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 CT45A9P0DMV2 189 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 AGFG1P52594 562 aaKnown RBP9.53□□□□□ -0.88
TOP3B-210ENST00000444502 EFNA3P52797 238 aa9.53□□□□□ -0.88
TOP3B-210ENST00000444502 UBE2MP61081 183 aaKnown RBP9.53□□□□□ -0.88
TOP3B-210ENST00000444502 FABP9Q0Z7S8 132 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms