RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 ING4Q9UNL4 249 aa7.19□□□□□ -1.26
CCDC39-201ENST00000442201 EML6Q6ZMW3 1958 aa7.19□□□□□ -1.26
CCDC39-201ENST00000442201 CPAMD8Q8IZJ3 1885 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 IGHV3-15A0A0B4J1V0 119 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 A0A1W2PQL4 384 aaPredicted RBP7.18□□□□□ -1.26
CCDC39-201ENST00000442201 ZNF726A6NNF4 738 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 UBE2CO00762 179 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 PLA2G10O15496 165 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 FABP7O15540 132 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 GPX5O75715 221 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 RLN2P04090 185 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 S100A9P06702 114 aaKnown RBP7.18□□□□□ -1.26
CCDC39-201ENST00000442201 RAB4AP20338 218 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 CALCRP30988 508 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 SUCLG1P53597 346 aaKnown RBP7.18□□□□□ -1.26
CCDC39-201ENST00000442201 ALKBH1Q13686 389 aaKnown RBP7.18□□□□□ -1.26
CCDC39-201ENST00000442201 OR2B11Q5JQS5 317 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 ZNF322Q6U7Q0 402 aaPredicted RBP7.18□□□□□ -1.26
CCDC39-201ENST00000442201 LYPD4Q6UWN0 246 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 ASB18Q6ZVZ8 466 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 SPACA3Q8IXA5 215 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 ZADH2Q8N4Q0 377 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 SLC25A44Q96H78 314 aaPredicted RBP7.18□□□□□ -1.26
CCDC39-201ENST00000442201 ADGRG7Q96K78 797 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 ARHGAP9Q9BRR9 750 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 MFRPQ9BY79 579 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 SRXN1Q9BYN0 137 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 DNTTIP1Q9H147 329 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 CLEC4MQ9H2X3 399 aaPredicted RBP7.18□□□□□ -1.26
CCDC39-201ENST00000442201 CCDC86Q9H6F5 360 aaKnown RBP7.18□□□□□ -1.26
CCDC39-201ENST00000442201 ISYNA1Q9NPH2 558 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 MGAT4AQ9UM21 535 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 SSUH2Q9Y2M2 353 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 CHTOPQ9Y3Y2 248 aaKnown RBP7.18□□□□□ -1.26
CCDC39-201ENST00000442201 IGLV1-36A0A0B4J1U3 117 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 NPIPA2E9PIF3 369 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 NPIPA3F8WFD2 350 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 SMAD9O15198 467 aaKnown RBP7.18□□□□□ -1.26
CCDC39-201ENST00000442201 HPGDSO60760 199 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 CFDP00746 253 aaPredicted RBP7.18□□□□□ -1.26
CCDC39-201ENST00000442201 IGHG1P01857 330 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 HLA-DQA2P01906 255 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 CTLA4P16410 223 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 GLO1Q04760 184 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 DOC2BQ14184 412 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 SSX2Q16385 188 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 TIMM50Q3ZCQ8 353 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 SLC16A9Q7RTY1 509 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 MEIOBQ8N635 442 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 ZNF485Q8NCK3 441 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 OR6X1Q8NH79 312 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 SMAP2Q8WU79 429 aaPredicted RBP7.18□□□□□ -1.26
CCDC39-201ENST00000442201 SPRYD4Q8WW59 207 aaPredicted RBP7.18□□□□□ -1.26
CCDC39-201ENST00000442201 SF3B5Q9BWJ5 86 aaKnown RBP7.18□□□□□ -1.26
CCDC39-201ENST00000442201 ZNF436Q9C0F3 470 aaPredicted RBP7.18□□□□□ -1.26
CCDC39-201ENST00000442201 TSPAN10Q9H1Z9 355 aaPredicted RBP7.18□□□□□ -1.26
CCDC39-201ENST00000442201 KLHL13Q9P2N7 655 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 MED12Q93074 2177 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 TVP23AA6NH52 213 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 RRP8O43159 456 aaKnown RBP7.18□□□□□ -1.26
CCDC39-201ENST00000442201 ACTL6AO96019 429 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 MT-ND5P03915 603 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 CD79BP40259 229 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 LHX2P50458 406 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 HCCSP53701 268 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 CLDN15P56746 228 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 CLDN17P56750 224 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 CLRN1P58418 232 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 ZNF85Q03923 595 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 CAMK2DQ13557 499 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 SNTB1Q13884 538 aaKnown RBP7.18□□□□□ -1.26
CCDC39-201ENST00000442201 SLC17A1Q14916 467 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 LGALSLQ3ZCW2 172 aaPredicted RBP7.18□□□□□ -1.26
CCDC39-201ENST00000442201 RNF212Q495C1 297 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 C19orf48Q6RUI8 117 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 ADAD1Q96M93 576 aaKnown RBP7.18□□□□□ -1.26
CCDC39-201ENST00000442201 INTS14Q96SY0 518 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 DPCDQ9BVM2 203 aaPredicted RBP7.18□□□□□ -1.26
CCDC39-201ENST00000442201 MRPL13Q9BYD1 178 aaKnown RBP7.18□□□□□ -1.26
CCDC39-201ENST00000442201 MIXL1Q9H2W2 232 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 EXO5Q9H790 373 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 UNKLQ9H9P5 680 aaKnown RBP7.18□□□□□ -1.26
CCDC39-201ENST00000442201 DKK4Q9UBT3 224 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 PCDHB10Q9UN67 800 aa7.18□□□□□ -1.26
CCDC39-201ENST00000442201 AKAP13Q12802 2813 aa7.17□□□□□ -1.26
CCDC39-201ENST00000442201 ZNF670-ZNF695F2Z2N8 137 aa7.17□□□□□ -1.26
CCDC39-201ENST00000442201 KHDRBS3O75525 346 aaKnown RBP7.17□□□□□ -1.26
CCDC39-201ENST00000442201 NR2C1P13056 603 aa7.17□□□□□ -1.26
CCDC39-201ENST00000442201 GADD45AP24522 165 aa7.17□□□□□ -1.26
CCDC39-201ENST00000442201 ACTA2P62736 377 aa7.17□□□□□ -1.26
CCDC39-201ENST00000442201 ACTG2P63267 376 aa7.17□□□□□ -1.26
CCDC39-201ENST00000442201 ACSM1Q08AH1 577 aa7.17□□□□□ -1.26
CCDC39-201ENST00000442201 ECH1Q13011 328 aa7.17□□□□□ -1.26
CCDC39-201ENST00000442201 TPBGQ13641 420 aa7.17□□□□□ -1.26
CCDC39-201ENST00000442201 SSX1Q16384 188 aa7.17□□□□□ -1.26
CCDC39-201ENST00000442201 LIPKQ5VXJ0 399 aa7.17□□□□□ -1.26
CCDC39-201ENST00000442201 IGFL3Q6UXB1 125 aa7.17□□□□□ -1.26
CCDC39-201ENST00000442201 KLBQ86Z14 1044 aa7.17□□□□□ -1.26
CCDC39-201ENST00000442201 C12orf45Q8N5I9 185 aaPredicted RBP7.17□□□□□ -1.26
CCDC39-201ENST00000442201 NOXO1Q8NFA2 376 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms