RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 CYTL1Q9NRR1 136 aa2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 ZNF222Q9UK12 451 aa2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 MAGI1Q96QZ7 1491 aaPredicted RBP2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 KIAA0556O60303 1618 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 MYO10Q9HD67 2058 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 CARMIL3Q8ND23 1372 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 TOPBP1Q92547 1522 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 OR6C74A6NCV1 312 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 NCBP2LA6PVI3 153 aaKnown RBP2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 H7C1H1 209 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 H7C417 338 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 BCKDKO14874 412 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 CDC40O60508 579 aaKnown RBP eCLIP2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 CD3GP09693 182 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 ERGP11308 486 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 PGAM1P18669 254 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 TUBG1P23258 451 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 IL32P24001 234 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 RFC3P40938 356 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 HCAR3P49019 387 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 P2RX1P51575 399 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 PPP1CBP62140 327 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 RPS15AP62244 130 aaKnown RBP2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 ARG2P78540 354 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 RAD51Q06609 339 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 CDH17Q12864 832 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 DOC2AQ14183 400 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 PTGES3Q15185 160 aaKnown RBP2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 HIKESHIQ53FT3 197 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 STUMQ69YW2 141 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 CBLN2Q8IUK8 224 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 H1FOOQ8IZA3 346 aaPredicted RBP2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 PGAM4Q8N0Y7 254 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 CBR4Q8N4T8 237 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 FAM184AQ8NB25 1140 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 NOXO1Q8NFA2 376 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 OR5W2Q8NH69 310 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 GPX8Q8TED1 209 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 ABHD3Q8WU67 409 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 GALNT14Q96FL9 552 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 PDXPQ96GD0 296 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 JSRP1Q96MG2 331 aaPredicted RBP2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 ZNF681Q96N22 645 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 ZNF317Q96PQ6 595 aaPredicted RBP2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 FOXC2Q99958 501 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 C8orf33Q9H7E9 229 aaPredicted RBP2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 TUBG2Q9NRH3 451 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 MTFP1Q9UDX5 166 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 RCL1Q9Y2P8 373 aaKnown RBP2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 SAR1BQ9Y6B6 198 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 PLB1Q6P1J6 1458 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 MAP3K4Q9Y6R4 1608 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 CABIN1Q9Y6J0 2220 aa2.23□□□□□ -2.05
TRAPPC13-204ENST00000438419 LRRC7Q96NW7 1537 aa2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 MROH7-TTC4A0A0A0MT08 1334 aa2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 GAKO14976 1311 aa2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 DOCK8Q8NF50 2099 aa2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 TMEM120BA0PK00 339 aa2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 TSPAN11A1L157 253 aa2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 SYCE1LA8MT33 242 aa2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 GABRPO00591 440 aa2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 PLPP1O14494 284 aa2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 SIVA1O15304 175 aa2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 RAB3AP20336 220 aa2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 NBL1P41271 181 aa2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 CLDN8P56748 225 aa2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 RAB11AP62491 216 aa2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 SEMG2Q02383 582 aa2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 SLAQ13239 276 aa2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 ART3Q13508 389 aa2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 DGCR6Q14129 220 aa2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 RAB11BQ15907 218 aa2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 GABRA6Q16445 453 aa2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 HADHQ16836 314 aaKnown RBP2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 NPSR1Q6W5P4 371 aa2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 C8orf31Q8N9H6 132 aa2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 GLYATL2Q8WU03 294 aa2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 MRGPRFQ96AM1 343 aa2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 KIAA1143Q96AT1 154 aaPredicted RBP2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 ISG20Q96AZ6 181 aaKnown RBP2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 APH1AQ96BI3 265 aa2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 SEH1LQ96EE3 360 aa2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 NRBF2Q96F24 287 aa2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 LCE3DQ9BYE3 92 aa2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 BLZF1Q9H2G9 400 aa2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 SAV1Q9H4B6 383 aaPredicted RBP2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 CLSTN2Q9H4D0 955 aa2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 SYNDIG1Q9H7V2 258 aa2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 C12orf10Q9HB07 376 aa2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 ZC4H2Q9NQZ6 224 aa2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 CLN6Q9NWW5 311 aa2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 SHROOM2Q13796 1616 aa2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 UHRF1BP1Q6BDS2 1440 aa2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 PRG4Q92954 1404 aaPredicted RBP2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 PLEKHG2Q9H7P9 1386 aa2.22□□□□□ -2.05
TRAPPC13-204ENST00000438419 KIAA0586Q9BVV6 1533 aa2.21□□□□□ -2.05
TRAPPC13-204ENST00000438419 ALKQ9UM73 1620 aa2.21□□□□□ -2.06
TRAPPC13-204ENST00000438419 IGKV2-28A0A075B6P5 120 aa2.21□□□□□ -2.06
TRAPPC13-204ENST00000438419 IGHV5-10-1A0A0J9YXX1 117 aa2.21□□□□□ -2.06
TRAPPC13-204ENST00000438419 A0A1B0GVX0 72 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms