RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 OR8J3Q8NGG0 315 aa15.21■□□□□ 0.03
UPK3BP1-201ENST00000428678 OR11L1Q8NGX0 322 aa15.21■□□□□ 0.03
UPK3BP1-201ENST00000428678 TBC1D15Q8TC07 691 aa15.21■□□□□ 0.03
UPK3BP1-201ENST00000428678 STON2Q8WXE9 905 aa15.21■□□□□ 0.03
UPK3BP1-201ENST00000428678 GATAD2BQ8WXI9 593 aa15.21■□□□□ 0.03
UPK3BP1-201ENST00000428678 DYRK2Q92630 601 aa15.21■□□□□ 0.03
UPK3BP1-201ENST00000428678 FNDC11Q9BVV2 318 aa15.21■□□□□ 0.03
UPK3BP1-201ENST00000428678 TCF7L1Q9HCS4 588 aa15.21■□□□□ 0.03
UPK3BP1-201ENST00000428678 ATPIF1Q9UII2 106 aa15.21■□□□□ 0.03
UPK3BP1-201ENST00000428678 TMCC3Q9ULS5 477 aa15.21■□□□□ 0.03
UPK3BP1-201ENST00000428678 COA3Q9Y2R0 106 aaPredicted RBP15.21■□□□□ 0.03
UPK3BP1-201ENST00000428678 SLC22A31A6NKX4 558 aa15.2■□□□□ 0.02
UPK3BP1-201ENST00000428678 ZNF879B4DU55 563 aa15.2■□□□□ 0.02
UPK3BP1-201ENST00000428678 GPR137BO60478 399 aa15.2■□□□□ 0.02
UPK3BP1-201ENST00000428678 KHDRBS3O75525 346 aaKnown RBP15.2■□□□□ 0.02
UPK3BP1-201ENST00000428678 TSPAN15O95858 294 aa15.2■□□□□ 0.02
UPK3BP1-201ENST00000428678 KDELR2P33947 212 aa15.2■□□□□ 0.02
UPK3BP1-201ENST00000428678 GPR4P46093 362 aa15.2■□□□□ 0.02
UPK3BP1-201ENST00000428678 PRSS12P56730 875 aa15.2■□□□□ 0.02
UPK3BP1-201ENST00000428678 RPL15P61313 204 aaKnown RBP15.2■□□□□ 0.02
UPK3BP1-201ENST00000428678 KRR1Q13601 381 aaKnown RBP15.2■□□□□ 0.02
UPK3BP1-201ENST00000428678 AGBL2Q5U5Z8 902 aa15.2■□□□□ 0.02
UPK3BP1-201ENST00000428678 ZNF730Q6ZMV8 503 aa15.2■□□□□ 0.02
UPK3BP1-201ENST00000428678 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.2■□□□□ 0.02
UPK3BP1-201ENST00000428678 OFCC1Q8IZS5 231 aa15.2■□□□□ 0.02
UPK3BP1-201ENST00000428678 LINC01006Q8NI28 216 aa15.2■□□□□ 0.02
UPK3BP1-201ENST00000428678 TBX15Q96SF7 602 aa15.2■□□□□ 0.02
UPK3BP1-201ENST00000428678 HCAR1Q9BXC0 346 aa15.2■□□□□ 0.02
UPK3BP1-201ENST00000428678 NDEL1Q9GZM8 345 aa15.2■□□□□ 0.02
UPK3BP1-201ENST00000428678 SYT4Q9H2B2 425 aa15.2■□□□□ 0.02
UPK3BP1-201ENST00000428678 CENPVL3A0A0U1RRI6 287 aa15.19■□□□□ 0.02
UPK3BP1-201ENST00000428678 J3KTA2 159 aa15.19■□□□□ 0.02
UPK3BP1-201ENST00000428678 FXYD1O00168 92 aa15.19■□□□□ 0.02
UPK3BP1-201ENST00000428678 CDC42EP2O14613 210 aa15.19■□□□□ 0.02
UPK3BP1-201ENST00000428678 FAM20BO75063 409 aa15.19■□□□□ 0.02
UPK3BP1-201ENST00000428678 ZNF26P17031 533 aaPredicted RBP15.19■□□□□ 0.02
UPK3BP1-201ENST00000428678 PSMB10P40306 273 aa15.19■□□□□ 0.02
UPK3BP1-201ENST00000428678 GATA4P43694 442 aa15.19■□□□□ 0.02
UPK3BP1-201ENST00000428678 NPY4RP50391 375 aa15.19■□□□□ 0.02
UPK3BP1-201ENST00000428678 ZBED5Q49AG3 693 aa15.19■□□□□ 0.02
UPK3BP1-201ENST00000428678 CD276Q5ZPR3 534 aa15.19■□□□□ 0.02
UPK3BP1-201ENST00000428678 FAM122BQ7Z309 247 aa15.19■□□□□ 0.02
UPK3BP1-201ENST00000428678 FAM156AQ8NDB6 213 aa15.19■□□□□ 0.02
UPK3BP1-201ENST00000428678 FAM110DQ8TAY7 271 aaPredicted RBP15.19■□□□□ 0.02
UPK3BP1-201ENST00000428678 ZNF583Q96ND8 569 aa15.19■□□□□ 0.02
UPK3BP1-201ENST00000428678 TRIM15Q9C019 465 aa15.19■□□□□ 0.02
UPK3BP1-201ENST00000428678 UFSP2Q9NUQ7 469 aa15.19■□□□□ 0.02
UPK3BP1-201ENST00000428678 ACOXLQ9NUZ1 547 aa15.19■□□□□ 0.02
UPK3BP1-201ENST00000428678 ERVK-18Q9QC07 812 aa15.19■□□□□ 0.02
UPK3BP1-201ENST00000428678 SNX13Q9Y5W8 968 aa15.19■□□□□ 0.02
UPK3BP1-201ENST00000428678 IMPA2O14732 288 aa15.18■□□□□ 0.02
UPK3BP1-201ENST00000428678 CLPXO76031 633 aa15.18■□□□□ 0.02
UPK3BP1-201ENST00000428678 IGHV4-59P01825 116 aa15.18■□□□□ 0.02
UPK3BP1-201ENST00000428678 MMP9P14780 707 aa15.18■□□□□ 0.02
UPK3BP1-201ENST00000428678 CENPAP49450 140 aa15.18■□□□□ 0.02
UPK3BP1-201ENST00000428678 PROK1P58294 105 aa15.18■□□□□ 0.02
UPK3BP1-201ENST00000428678 SELENOWP63302 87 aa15.18■□□□□ 0.02
UPK3BP1-201ENST00000428678 HOXA4Q00056 320 aaPredicted RBP15.18■□□□□ 0.02
UPK3BP1-201ENST00000428678 MAB21L1Q13394 359 aa15.18■□□□□ 0.02
UPK3BP1-201ENST00000428678 CLEC12AQ5QGZ9 265 aa15.18■□□□□ 0.02
UPK3BP1-201ENST00000428678 METTL11BQ5VVY1 283 aa15.18■□□□□ 0.02
UPK3BP1-201ENST00000428678 PRAMEF6Q5VXH4 476 aa15.18■□□□□ 0.02
UPK3BP1-201ENST00000428678 TBPL2Q6SJ96 375 aa15.18■□□□□ 0.02
UPK3BP1-201ENST00000428678 RNF113BQ8IZP6 322 aaKnown RBP15.18■□□□□ 0.02
UPK3BP1-201ENST00000428678 BOLLQ8N9W6 283 aaKnown RBP15.18■□□□□ 0.02
UPK3BP1-201ENST00000428678 Q8TCH9 128 aa15.18■□□□□ 0.02
UPK3BP1-201ENST00000428678 ACOT11Q8WXI4 607 aaPredicted RBP15.18■□□□□ 0.02
UPK3BP1-201ENST00000428678 LZICQ8WZA0 190 aa15.18■□□□□ 0.02
UPK3BP1-201ENST00000428678 LHX4Q969G2 390 aa15.18■□□□□ 0.02
UPK3BP1-201ENST00000428678 WDFY2Q96P53 400 aa15.18■□□□□ 0.02
UPK3BP1-201ENST00000428678 COQ7Q99807 217 aa15.18■□□□□ 0.02
UPK3BP1-201ENST00000428678 HDHD2Q9H0R4 259 aa15.18■□□□□ 0.02
UPK3BP1-201ENST00000428678 CTSZQ9UBR2 303 aa15.18■□□□□ 0.02
UPK3BP1-201ENST00000428678 NBEAL2Q6ZNJ1 2754 aa15.18■□□□□ 0.02
UPK3BP1-201ENST00000428678 A0A087WUU8 490 aa15.17■□□□□ 0.02
UPK3BP1-201ENST00000428678 IGHV1-69DA0A0B4J2H0 117 aa15.17■□□□□ 0.02
UPK3BP1-201ENST00000428678 A0A1B0GWJ7 208 aa15.17■□□□□ 0.02
UPK3BP1-201ENST00000428678 ELOVL7A1L3X0 281 aa15.17■□□□□ 0.02
UPK3BP1-201ENST00000428678 FFAR1O14842 300 aa15.17■□□□□ 0.02
UPK3BP1-201ENST00000428678 IGHV1-69P01742 117 aa15.17■□□□□ 0.02
UPK3BP1-201ENST00000428678 IFNW1P05000 195 aa15.17■□□□□ 0.02
UPK3BP1-201ENST00000428678 LIPFP07098 398 aa15.17■□□□□ 0.02
UPK3BP1-201ENST00000428678 MPPED2Q15777 294 aa15.17■□□□□ 0.02
UPK3BP1-201ENST00000428678 KCNJ8Q15842 424 aa15.17■□□□□ 0.02
UPK3BP1-201ENST00000428678 BEND6Q5SZJ8 279 aaPredicted RBP15.17■□□□□ 0.02
UPK3BP1-201ENST00000428678 MBOAT2Q6ZWT7 520 aa15.17■□□□□ 0.02
UPK3BP1-201ENST00000428678 VTCN1Q7Z7D3 282 aa15.17■□□□□ 0.02
UPK3BP1-201ENST00000428678 CELF2-AS1Q8N7Q2 184 aa15.17■□□□□ 0.02
UPK3BP1-201ENST00000428678 PNLDC1Q8NA58 520 aaKnown RBP15.17■□□□□ 0.02
UPK3BP1-201ENST00000428678 SCCPDHQ8NBX0 429 aa15.17■□□□□ 0.02
UPK3BP1-201ENST00000428678 GJC3Q8NFK1 279 aa15.17■□□□□ 0.02
UPK3BP1-201ENST00000428678 ERGIC1Q969X5 290 aa15.17■□□□□ 0.02
UPK3BP1-201ENST00000428678 NUAK2Q9H093 628 aa15.17■□□□□ 0.02
UPK3BP1-201ENST00000428678 NMNAT1Q9HAN9 279 aaPredicted RBP15.17■□□□□ 0.02
UPK3BP1-201ENST00000428678 RPS6KA6Q9UK32 745 aa15.17■□□□□ 0.02
UPK3BP1-201ENST00000428678 A0A0G2JND7 137 aa15.16■□□□□ 0.02
UPK3BP1-201ENST00000428678 A0A0U1RQK1 487 aa15.16■□□□□ 0.02
UPK3BP1-201ENST00000428678 FAM220BPB1ANY3 271 aa15.16■□□□□ 0.02
UPK3BP1-201ENST00000428678 SOCS2O14508 198 aa15.16■□□□□ 0.02
UPK3BP1-201ENST00000428678 MRASO14807 208 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms