RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 DCTDP32321 178 aa7.79□□□□□ -1.16
SMC1A-203ENST00000428014 DDOSTP39656 456 aa7.79□□□□□ -1.16
SMC1A-203ENST00000428014 GATA4P43694 442 aa7.79□□□□□ -1.16
SMC1A-203ENST00000428014 ENTPD1P49961 510 aa7.79□□□□□ -1.16
SMC1A-203ENST00000428014 ZNF81P51508 661 aa7.79□□□□□ -1.16
SMC1A-203ENST00000428014 TPTEP56180 551 aa7.79□□□□□ -1.16
SMC1A-203ENST00000428014 LCN6P62502 163 aa7.79□□□□□ -1.16
SMC1A-203ENST00000428014 GRB2P62993 217 aaKnown RBP7.79□□□□□ -1.16
SMC1A-203ENST00000428014 ZSCAN26Q16670 478 aa7.79□□□□□ -1.16
SMC1A-203ENST00000428014 C11orf91Q3C1V1 193 aa7.79□□□□□ -1.16
SMC1A-203ENST00000428014 C6orf52Q5T4I8 152 aa7.79□□□□□ -1.16
SMC1A-203ENST00000428014 LINC01590Q5TEZ4 76 aa7.79□□□□□ -1.16
SMC1A-203ENST00000428014 CYB5R2Q6BCY4 276 aa7.79□□□□□ -1.16
SMC1A-203ENST00000428014 ZFP1Q6P2D0 407 aa7.79□□□□□ -1.16
SMC1A-203ENST00000428014 RFPL4BQ6ZWI9 263 aa7.79□□□□□ -1.16
SMC1A-203ENST00000428014 MEX3DQ86XN8 651 aaKnown RBP7.79□□□□□ -1.16
SMC1A-203ENST00000428014 EGFL6Q8IUX8 553 aa7.79□□□□□ -1.16
SMC1A-203ENST00000428014 ABHD4Q8TB40 342 aa7.79□□□□□ -1.16
SMC1A-203ENST00000428014 SLC25A40Q8TBP6 338 aa7.79□□□□□ -1.16
SMC1A-203ENST00000428014 SPTSSAQ969W0 71 aa7.79□□□□□ -1.16
SMC1A-203ENST00000428014 SLCO4A1Q96BD0 722 aa7.79□□□□□ -1.16
SMC1A-203ENST00000428014 FOXN4Q96NZ1 517 aa7.79□□□□□ -1.16
SMC1A-203ENST00000428014 MNTQ99583 582 aa7.79□□□□□ -1.16
SMC1A-203ENST00000428014 NIPSNAP1Q9BPW8 284 aa7.79□□□□□ -1.16
SMC1A-203ENST00000428014 CDADC1Q9BWV3 514 aa7.79□□□□□ -1.16
SMC1A-203ENST00000428014 OR2J1Q9GZK6 312 aa7.79□□□□□ -1.16
SMC1A-203ENST00000428014 RGCCQ9H4X1 137 aa7.79□□□□□ -1.16
SMC1A-203ENST00000428014 NTN4Q9HB63 628 aa7.79□□□□□ -1.16
SMC1A-203ENST00000428014 EMC7Q9NPA0 242 aa7.79□□□□□ -1.16
SMC1A-203ENST00000428014 MRPL22Q9NWU5 206 aaKnown RBP7.79□□□□□ -1.16
SMC1A-203ENST00000428014 PDP1Q9P0J1 537 aaPredicted RBP7.79□□□□□ -1.16
SMC1A-203ENST00000428014 IL20RAQ9UHF4 553 aa7.79□□□□□ -1.16
SMC1A-203ENST00000428014 POLR1DQ9Y2S0 133 aa7.79□□□□□ -1.16
SMC1A-203ENST00000428014 AP4S1Q9Y587 144 aa7.79□□□□□ -1.16
SMC1A-203ENST00000428014 COMMD3-BMI1R4GMX3 469 aa7.79□□□□□ -1.16
SMC1A-203ENST00000428014 U3KQV3 271 aa7.79□□□□□ -1.16
SMC1A-203ENST00000428014 ATRQ13535 2644 aa7.78□□□□□ -1.16
SMC1A-203ENST00000428014 ACOD1A6NK06 481 aa7.78□□□□□ -1.16
SMC1A-203ENST00000428014 A8MV72 311 aaPredicted RBP7.78□□□□□ -1.16
SMC1A-203ENST00000428014 ZNF878C9JN71 531 aa7.78□□□□□ -1.16
SMC1A-203ENST00000428014 ACSM4P0C7M7 580 aa7.78□□□□□ -1.16
SMC1A-203ENST00000428014 SPI1P17947 270 aa7.78□□□□□ -1.16
SMC1A-203ENST00000428014 GATA3P23771 443 aa7.78□□□□□ -1.16
SMC1A-203ENST00000428014 ACTR3P61158 418 aa7.78□□□□□ -1.16
SMC1A-203ENST00000428014 EFNB1P98172 346 aa7.78□□□□□ -1.16
SMC1A-203ENST00000428014 PSG7Q13046 419 aa7.78□□□□□ -1.16
SMC1A-203ENST00000428014 TMED1Q13445 227 aa7.78□□□□□ -1.16
SMC1A-203ENST00000428014 CRMP1Q14194 572 aa7.78□□□□□ -1.16
SMC1A-203ENST00000428014 RSPO1Q2MKA7 263 aaPredicted RBP7.78□□□□□ -1.16
SMC1A-203ENST00000428014 CLEC12AQ5QGZ9 265 aa7.78□□□□□ -1.16
SMC1A-203ENST00000428014 KDM4DQ6B0I6 523 aa7.78□□□□□ -1.16
SMC1A-203ENST00000428014 LRP11Q86VZ4 500 aa7.78□□□□□ -1.16
SMC1A-203ENST00000428014 ZDHHC13Q8IUH4 622 aa7.78□□□□□ -1.16
SMC1A-203ENST00000428014 SPERTQ8NA61 448 aa7.78□□□□□ -1.16
SMC1A-203ENST00000428014 SDR9C7Q8NEX9 313 aa7.78□□□□□ -1.16
SMC1A-203ENST00000428014 PROKR2Q8NFJ6 384 aa7.78□□□□□ -1.16
SMC1A-203ENST00000428014 OR8G5Q8NG78 346 aa7.78□□□□□ -1.16
SMC1A-203ENST00000428014 OR52H1Q8NGJ2 320 aa7.78□□□□□ -1.16
SMC1A-203ENST00000428014 OR13G1Q8NGZ3 307 aa7.78□□□□□ -1.16
SMC1A-203ENST00000428014 OR4Q3Q8NH05 313 aa7.78□□□□□ -1.16
SMC1A-203ENST00000428014 ST7LQ8TDW4 575 aa7.78□□□□□ -1.16
SMC1A-203ENST00000428014 RNF133Q8WVZ7 376 aa7.78□□□□□ -1.16
SMC1A-203ENST00000428014 SPSB4Q96A44 273 aa7.78□□□□□ -1.16
SMC1A-203ENST00000428014 TIMD4Q96H15 378 aa7.78□□□□□ -1.16
SMC1A-203ENST00000428014 CENPNQ96H22 339 aaPredicted RBP7.78□□□□□ -1.16
SMC1A-203ENST00000428014 TSSK2Q96PF2 358 aa7.78□□□□□ -1.16
SMC1A-203ENST00000428014 SYT3Q9BQG1 590 aa7.78□□□□□ -1.16
SMC1A-203ENST00000428014 BPESC1Q9GZL8 116 aa7.78□□□□□ -1.16
SMC1A-203ENST00000428014 GSX1Q9H4S2 264 aaPredicted RBP7.78□□□□□ -1.16
SMC1A-203ENST00000428014 SAP30LQ9HAJ7 183 aa7.78□□□□□ -1.16
SMC1A-203ENST00000428014 SRA1Q9HD15 236 aaKnown RBP7.78□□□□□ -1.16
SMC1A-203ENST00000428014 HAO2Q9NYQ3 351 aa7.78□□□□□ -1.16
SMC1A-203ENST00000428014 MYEF2Q9P2K5 600 aaKnown RBP7.78□□□□□ -1.16
SMC1A-203ENST00000428014 PURGQ9UJV8 347 aaKnown RBP7.78□□□□□ -1.16
SMC1A-203ENST00000428014 POLR3KQ9Y2Y1 108 aaPredicted RBP7.78□□□□□ -1.16
SMC1A-203ENST00000428014 MALRD1Q5VYJ5 2156 aa7.77□□□□□ -1.17
SMC1A-203ENST00000428014 IGHV1-69-2A0A0G2JMI3 117 aa7.77□□□□□ -1.17
SMC1A-203ENST00000428014 B4DSR2 109 aa7.77□□□□□ -1.17
SMC1A-203ENST00000428014 H3BN98 237 aa7.77□□□□□ -1.17
SMC1A-203ENST00000428014 M0R135 149 aa7.77□□□□□ -1.17
SMC1A-203ENST00000428014 XRCC2O43543 280 aa7.77□□□□□ -1.17
SMC1A-203ENST00000428014 CIB2O75838 187 aa7.77□□□□□ -1.17
SMC1A-203ENST00000428014 CLPTM1O96005 669 aa7.77□□□□□ -1.17
SMC1A-203ENST00000428014 NGFP01138 241 aa7.77□□□□□ -1.17
SMC1A-203ENST00000428014 IGHV1-46P01743 117 aa7.77□□□□□ -1.17
SMC1A-203ENST00000428014 HPXP02790 462 aa7.77□□□□□ -1.17
SMC1A-203ENST00000428014 IGHV4-31P0DP07 118 aa7.77□□□□□ -1.17
SMC1A-203ENST00000428014 CCL2P13500 99 aa7.77□□□□□ -1.17
SMC1A-203ENST00000428014 CCNOP22674 350 aa7.77□□□□□ -1.17
SMC1A-203ENST00000428014 GPR6P46095 362 aaPredicted RBP7.77□□□□□ -1.17
SMC1A-203ENST00000428014 DVL1P1P54792 670 aaPredicted RBP7.77□□□□□ -1.17
SMC1A-203ENST00000428014 MZT1Q08AG7 82 aa7.77□□□□□ -1.17
SMC1A-203ENST00000428014 MALLQ13021 153 aa7.77□□□□□ -1.17
SMC1A-203ENST00000428014 GGTLC2Q14390 218 aa7.77□□□□□ -1.17
SMC1A-203ENST00000428014 HFEQ30201 348 aa7.77□□□□□ -1.17
SMC1A-203ENST00000428014 TMEM155Q4W5P6 130 aa7.77□□□□□ -1.17
SMC1A-203ENST00000428014 C1orf146Q5VVC0 180 aa7.77□□□□□ -1.17
SMC1A-203ENST00000428014 FAM166AQ6J272 317 aa7.77□□□□□ -1.17
SMC1A-203ENST00000428014 TIGD4Q8IY51 512 aa7.77□□□□□ -1.17
SMC1A-203ENST00000428014 ZNF283Q8N7M2 679 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms