RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 KRTAP4-8Q9BYQ9 185 aa6.38□□□□□ -1.39
LINC01049-201ENST00000426840 UBTD1Q9HAC8 227 aa6.38□□□□□ -1.39
LINC01049-201ENST00000426840 CDH20Q9HBT6 801 aa6.38□□□□□ -1.39
LINC01049-201ENST00000426840 HAO2Q9NYQ3 351 aa6.38□□□□□ -1.39
LINC01049-201ENST00000426840 ATPIF1Q9UII2 106 aa6.38□□□□□ -1.39
LINC01049-201ENST00000426840 POLR1DQ9Y2S0 133 aa6.38□□□□□ -1.39
LINC01049-201ENST00000426840 RNF114Q9Y508 228 aa6.38□□□□□ -1.39
LINC01049-201ENST00000426840 FBN2P35556 2912 aa6.38□□□□□ -1.39
LINC01049-201ENST00000426840 CELSR2Q9HCU4 2923 aa6.38□□□□□ -1.39
LINC01049-201ENST00000426840 ABCA12Q86UK0 2595 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 H0YAE9 185 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 OVOL3O00110 214 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 GPRIN2O60269 458 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 ATE1O95260 518 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 CLIC3O95833 236 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 SOD3P08294 240 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 SBK2P0C263 348 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 ALOX5APP20292 161 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 CCNOP22674 350 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 HTR1FP30939 366 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 OTX1P32242 354 aaPredicted RBP6.37□□□□□ -1.39
LINC01049-201ENST00000426840 NAA10P41227 235 aaPredicted RBP6.37□□□□□ -1.39
LINC01049-201ENST00000426840 RAD52P43351 418 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 FABP6P51161 128 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 CDH11P55287 796 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 RPS7P62081 194 aaKnown RBP6.37□□□□□ -1.39
LINC01049-201ENST00000426840 SNTB2Q13425 540 aaKnown RBP6.37□□□□□ -1.39
LINC01049-201ENST00000426840 TMED1Q13445 227 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 EIF2B1Q14232 305 aaKnown RBP6.37□□□□□ -1.39
LINC01049-201ENST00000426840 ADIPOQQ15848 244 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 LCN1P1Q5VSP4 162 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 MEDAGQ5VYS4 303 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 TTC23Q5W5X9 447 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 C11orf71Q6IPW1 123 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 KRT80Q6KB66 452 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 ZNF544Q6NX49 715 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 TMEM154Q6P9G4 183 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 PAMR1Q6UXH9 720 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 COLCA1Q6ZS62 124 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 THAP5Q7Z6K1 395 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 DTX2Q86UW9 622 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 NAA40Q86UY6 237 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 GID4Q8IVV7 300 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 ZNF101Q8IZC7 436 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 ZNF555Q8NEP9 628 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 RNF141Q8WVD5 230 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 TMEM171Q8WVE6 324 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 RNF133Q8WVZ7 376 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 APH1BQ8WW43 257 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 TFAP2CQ92754 450 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 SLAMF6Q96DU3 332 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 C4orf45Q96LM5 186 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 DCLRE1CQ96SD1 692 aaKnown RBP6.37□□□□□ -1.39
LINC01049-201ENST00000426840 DOK1Q99704 481 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 TRAF4Q9BUZ4 470 aaPredicted RBP6.37□□□□□ -1.39
LINC01049-201ENST00000426840 YIPF3Q9GZM5 350 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 HDHD2Q9H0R4 259 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 ZNF442Q9H7R0 627 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 ADGRL4Q9HBW9 690 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 CA10Q9NS85 328 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 DDX28Q9NUL7 540 aaKnown RBP6.37□□□□□ -1.39
LINC01049-201ENST00000426840 TBCCD1Q9NVR7 557 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 IMPAD1Q9NX62 359 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 DNAJC27Q9NZQ0 273 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 WARS2Q9UGM6 360 aaKnown RBP6.37□□□□□ -1.39
LINC01049-201ENST00000426840 ST6GALNAC2Q9UJ37 374 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 POU2F3Q9UKI9 436 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 COPS3Q9UNS2 423 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 KLHDC2Q9Y2U9 406 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 STARD10Q9Y365 291 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 GRIP1Q9Y3R0 1128 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 SPEF1Q9Y4P9 236 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 CRYBG3Q68DQ2 2970 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 ARFGEF3Q5TH69 2177 aa6.37□□□□□ -1.39
LINC01049-201ENST00000426840 CENPEQ02224 2701 aa6.36□□□□□ -1.39
LINC01049-201ENST00000426840 USF3Q68DE3 2245 aa6.36□□□□□ -1.39
LINC01049-201ENST00000426840 VSTM5A8MXK1 200 aa6.36□□□□□ -1.39
LINC01049-201ENST00000426840 PRR32B1ATL7 298 aa6.36□□□□□ -1.39
LINC01049-201ENST00000426840 RGS13O14921 159 aa6.36□□□□□ -1.39
LINC01049-201ENST00000426840 MPZL2O60487 215 aa6.36□□□□□ -1.39
LINC01049-201ENST00000426840 SMPD2O60906 423 aa6.36□□□□□ -1.39
LINC01049-201ENST00000426840 WBP4O75554 376 aaKnown RBP6.36□□□□□ -1.39
LINC01049-201ENST00000426840 RAF1P04049 648 aa6.36□□□□□ -1.39
LINC01049-201ENST00000426840 MRPL3P09001 348 aaKnown RBP6.36□□□□□ -1.39
LINC01049-201ENST00000426840 OR4A8P0C604 315 aa6.36□□□□□ -1.39
LINC01049-201ENST00000426840 ACSM4P0C7M7 580 aa6.36□□□□□ -1.39
LINC01049-201ENST00000426840 ANOS1P23352 680 aa6.36□□□□□ -1.39
LINC01049-201ENST00000426840 SERPINF1P36955 418 aa6.36□□□□□ -1.39
LINC01049-201ENST00000426840 CAPGP40121 348 aa6.36□□□□□ -1.39
LINC01049-201ENST00000426840 ISL1P61371 349 aa6.36□□□□□ -1.39
LINC01049-201ENST00000426840 ERVS71-1P61550 626 aa6.36□□□□□ -1.39
LINC01049-201ENST00000426840 GALK2Q01415 458 aa6.36□□□□□ -1.39
LINC01049-201ENST00000426840 ECH1Q13011 328 aa6.36□□□□□ -1.39
LINC01049-201ENST00000426840 MAD2L1BPQ15013 274 aaPredicted RBP6.36□□□□□ -1.39
LINC01049-201ENST00000426840 EFNB3Q15768 340 aa6.36□□□□□ -1.39
LINC01049-201ENST00000426840 ZNF691Q5VV52 312 aa6.36□□□□□ -1.39
LINC01049-201ENST00000426840 LAIR2Q6ISS4 152 aa6.36□□□□□ -1.39
LINC01049-201ENST00000426840 VHLLQ6RSH7 139 aa6.36□□□□□ -1.39
LINC01049-201ENST00000426840 USP51Q70EK9 711 aa6.36□□□□□ -1.39
LINC01049-201ENST00000426840 RHOUQ7L0Q8 258 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms