RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 ACOD1A6NK06 481 aa13.22□□□□□ -0.29
GINS3-203ENST00000426538 H3BSH0 61 aa13.22□□□□□ -0.29
GINS3-203ENST00000426538 M0R135 149 aa13.22□□□□□ -0.29
GINS3-203ENST00000426538 TOXO94900 526 aa13.22□□□□□ -0.29
GINS3-203ENST00000426538 IL18BPO95998 194 aa13.22□□□□□ -0.29
GINS3-203ENST00000426538 MMP7P09237 267 aaPredicted RBP13.22□□□□□ -0.29
GINS3-203ENST00000426538 UCHL1P09936 223 aa13.22□□□□□ -0.29
GINS3-203ENST00000426538 CD79AP11912 226 aa13.22□□□□□ -0.29
GINS3-203ENST00000426538 ARR3P36575 388 aa13.22□□□□□ -0.29
GINS3-203ENST00000426538 HTR5AP47898 357 aa13.22□□□□□ -0.29
GINS3-203ENST00000426538 SOX2P48431 317 aa13.22□□□□□ -0.29
GINS3-203ENST00000426538 TPTEP56180 551 aa13.22□□□□□ -0.29
GINS3-203ENST00000426538 ZNF404Q494X3 552 aa13.22□□□□□ -0.29
GINS3-203ENST00000426538 TMEM53Q6P2H8 277 aa13.22□□□□□ -0.29
GINS3-203ENST00000426538 DPPA2Q7Z7J5 298 aa13.22□□□□□ -0.29
GINS3-203ENST00000426538 TPRA1Q86W33 373 aa13.22□□□□□ -0.29
GINS3-203ENST00000426538 ELMOD2Q8IZ81 293 aa13.22□□□□□ -0.29
GINS3-203ENST00000426538 AKR7LQ8NHP1 331 aa13.22□□□□□ -0.29
GINS3-203ENST00000426538 MCFD2Q8NI22 146 aa13.22□□□□□ -0.29
GINS3-203ENST00000426538 NANOS1Q8WY41 292 aaKnown RBP13.22□□□□□ -0.29
GINS3-203ENST00000426538 RGP1Q92546 391 aaPredicted RBP13.22□□□□□ -0.29
GINS3-203ENST00000426538 SLC25A46Q96AG3 418 aa13.22□□□□□ -0.29
GINS3-203ENST00000426538 STARD4Q96DR4 205 aa13.22□□□□□ -0.29
GINS3-203ENST00000426538 ZNF799Q96GE5 643 aa13.22□□□□□ -0.29
GINS3-203ENST00000426538 PPIL3Q9H2H8 161 aaKnown RBP13.22□□□□□ -0.29
GINS3-203ENST00000426538 NOX4Q9NPH5 578 aa13.22□□□□□ -0.29
GINS3-203ENST00000426538 NUFIP1Q9UHK0 495 aaKnown RBP13.22□□□□□ -0.29
GINS3-203ENST00000426538 HHLA2Q9UM44 414 aa13.22□□□□□ -0.29
GINS3-203ENST00000426538 ZNF835Q9Y2P0 537 aa13.22□□□□□ -0.29
GINS3-203ENST00000426538 TRBV5-5A0A0J9YX44 114 aa13.21□□□□□ -0.3
GINS3-203ENST00000426538 OR6C6A6NF89 314 aa13.21□□□□□ -0.3
GINS3-203ENST00000426538 UBL3O95164 117 aa13.21□□□□□ -0.3
GINS3-203ENST00000426538 HLA-HP01893 362 aa13.21□□□□□ -0.3
GINS3-203ENST00000426538 RAF1P04049 648 aa13.21□□□□□ -0.3
GINS3-203ENST00000426538 CD2P06729 351 aa13.21□□□□□ -0.3
GINS3-203ENST00000426538 SLC2A1P11166 492 aa13.21□□□□□ -0.3
GINS3-203ENST00000426538 SRMP19623 302 aa13.21□□□□□ -0.3
GINS3-203ENST00000426538 IGHV1-2P23083 117 aa13.21□□□□□ -0.3
GINS3-203ENST00000426538 RAB1AP62820 205 aa13.21□□□□□ -0.3
GINS3-203ENST00000426538 LY6DQ14210 128 aa13.21□□□□□ -0.3
GINS3-203ENST00000426538 PABPC1L2AQ5JQF8 200 aa13.21□□□□□ -0.3
GINS3-203ENST00000426538 FAM57BQ71RH2 274 aa13.21□□□□□ -0.3
GINS3-203ENST00000426538 RPRMLQ8N4K4 120 aa13.21□□□□□ -0.3
GINS3-203ENST00000426538 OR51A4Q8NGJ6 313 aa13.21□□□□□ -0.3
GINS3-203ENST00000426538 TMEM106AQ96A25 262 aa13.21□□□□□ -0.3
GINS3-203ENST00000426538 PGAM5Q96HS1 289 aa13.21□□□□□ -0.3
GINS3-203ENST00000426538 DERL3Q96Q80 235 aa13.21□□□□□ -0.3
GINS3-203ENST00000426538 SLITRK2Q9H156 845 aa13.21□□□□□ -0.3
GINS3-203ENST00000426538 WNT5BQ9H1J7 359 aa13.21□□□□□ -0.3
GINS3-203ENST00000426538 MMP27Q9H306 513 aa13.21□□□□□ -0.3
GINS3-203ENST00000426538 DHDHQ9UQ10 334 aa13.21□□□□□ -0.3
GINS3-203ENST00000426538 ZZEF1O43149 2961 aa13.2□□□□□ -0.3
GINS3-203ENST00000426538 TRAV1-2A0A0B4J238 106 aa13.2□□□□□ -0.3
GINS3-203ENST00000426538 ERVH48-1M5A8F1 160 aa13.2□□□□□ -0.3
GINS3-203ENST00000426538 P2RY10O00398 339 aa13.2□□□□□ -0.3
GINS3-203ENST00000426538 TTRP02766 147 aa13.2□□□□□ -0.3
GINS3-203ENST00000426538 CLEC2LP0C7M8 214 aa13.2□□□□□ -0.3
GINS3-203ENST00000426538 GLI4P10075 376 aa13.2□□□□□ -0.3
GINS3-203ENST00000426538 ACHEP22303 614 aa13.2□□□□□ -0.3
GINS3-203ENST00000426538 CEACAM8P31997 349 aaPredicted RBP13.2□□□□□ -0.3
GINS3-203ENST00000426538 OTX1P32242 354 aaPredicted RBP13.2□□□□□ -0.3
GINS3-203ENST00000426538 MAGEB1P43366 347 aa13.2□□□□□ -0.3
GINS3-203ENST00000426538 PLP2Q04941 152 aa13.2□□□□□ -0.3
GINS3-203ENST00000426538 HNRNPA0Q13151 305 aaKnown RBP13.2□□□□□ -0.3
GINS3-203ENST00000426538 HIKESHIQ53FT3 197 aa13.2□□□□□ -0.3
GINS3-203ENST00000426538 DRAM2Q6UX65 266 aa13.2□□□□□ -0.3
GINS3-203ENST00000426538 BEND4Q6ZU67 534 aa13.2□□□□□ -0.3
GINS3-203ENST00000426538 CCDC36Q8IYA8 594 aa13.2□□□□□ -0.3
GINS3-203ENST00000426538 ZNF610Q8N9Z0 462 aa13.2□□□□□ -0.3
GINS3-203ENST00000426538 OR10AC1Q8NH08 325 aa13.2□□□□□ -0.3
GINS3-203ENST00000426538 SLC7A6Q92536 515 aa13.2□□□□□ -0.3
GINS3-203ENST00000426538 BCL2L2Q92843 193 aaPredicted RBP13.2□□□□□ -0.3
GINS3-203ENST00000426538 C6orf62Q9GZU0 229 aaPredicted RBP13.2□□□□□ -0.3
GINS3-203ENST00000426538 CXorf56Q9H5V9 222 aa13.2□□□□□ -0.3
GINS3-203ENST00000426538 SP140LQ9H930 580 aa13.2□□□□□ -0.3
GINS3-203ENST00000426538 TCF7L1Q9HCS4 588 aa13.2□□□□□ -0.3
GINS3-203ENST00000426538 ZNF224Q9NZL3 707 aa13.2□□□□□ -0.3
GINS3-203ENST00000426538 TINAGQ9UJW2 476 aa13.2□□□□□ -0.3
GINS3-203ENST00000426538 A0A1B0GVI7 797 aa13.19□□□□□ -0.3
GINS3-203ENST00000426538 SHISA3A0PJX4 238 aa13.19□□□□□ -0.3
GINS3-203ENST00000426538 SMIM30A4D0T7 59 aa13.19□□□□□ -0.3
GINS3-203ENST00000426538 SYT7O43581 403 aa13.19□□□□□ -0.3
GINS3-203ENST00000426538 LYZL6O75951 148 aa13.19□□□□□ -0.3
GINS3-203ENST00000426538 DBHP09172 617 aa13.19□□□□□ -0.3
GINS3-203ENST00000426538 ACSM4P0C7M7 580 aa13.19□□□□□ -0.3
GINS3-203ENST00000426538 UBE2NP61088 152 aaKnown RBP13.19□□□□□ -0.3
GINS3-203ENST00000426538 PMPCAQ10713 525 aa13.19□□□□□ -0.3
GINS3-203ENST00000426538 RSPO1Q2MKA7 263 aaPredicted RBP13.19□□□□□ -0.3
GINS3-203ENST00000426538 TBRG1Q3YBR2 411 aa13.19□□□□□ -0.3
GINS3-203ENST00000426538 NAA40Q86UY6 237 aa13.19□□□□□ -0.3
GINS3-203ENST00000426538 COMMD2Q86X83 199 aa13.19□□□□□ -0.3
GINS3-203ENST00000426538 NAXEQ8NCW5 288 aa13.19□□□□□ -0.3
GINS3-203ENST00000426538 OR8B12Q8NGG6 310 aa13.19□□□□□ -0.3
GINS3-203ENST00000426538 OR13C3Q8NGS6 347 aa13.19□□□□□ -0.3
GINS3-203ENST00000426538 ASB5Q8WWX0 329 aa13.19□□□□□ -0.3
GINS3-203ENST00000426538 DACH2Q96NX9 599 aa13.19□□□□□ -0.3
GINS3-203ENST00000426538 SFXN3Q9BWM7 321 aa13.19□□□□□ -0.3
GINS3-203ENST00000426538 SLC17A5Q9NRA2 495 aa13.19□□□□□ -0.3
GINS3-203ENST00000426538 SH3BGRL2Q9UJC5 107 aa13.19□□□□□ -0.3
GINS3-203ENST00000426538 A3GALT2U3KPV4 340 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms