RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 SPRR3Q9UBC9 169 aa23.31■■□□□ 1.32
LDB1-202ENST00000425280 CEACAM16Q2WEN9 425 aa23.3■■□□□ 1.32
LDB1-202ENST00000425280 ELFN2Q5R3F8 820 aa23.3■■□□□ 1.32
LDB1-202ENST00000425280 EMC3Q9P0I2 261 aa23.3■■□□□ 1.32
LDB1-202ENST00000425280 ETV7Q9Y603 341 aa23.3■■□□□ 1.32
LDB1-202ENST00000425280 KCNMB2Q9Y691 235 aa23.3■■□□□ 1.32
LDB1-202ENST00000425280 EFSO43281 561 aa23.29■■□□□ 1.32
LDB1-202ENST00000425280 MRPL33O75394 65 aaKnown RBP23.29■■□□□ 1.32
LDB1-202ENST00000425280 UBL3O95164 117 aa23.29■■□□□ 1.32
LDB1-202ENST00000425280 CST2P09228 141 aa23.29■■□□□ 1.32
LDB1-202ENST00000425280 NR4A2P43354 598 aa23.29■■□□□ 1.32
LDB1-202ENST00000425280 TUSC5Q8IXB3 177 aa23.29■■□□□ 1.32
LDB1-202ENST00000425280 PLPP7Q8NBV4 271 aa23.29■■□□□ 1.32
LDB1-202ENST00000425280 OR51A2Q8NGJ7 313 aa23.29■■□□□ 1.32
LDB1-202ENST00000425280 FGGYQ96C11 551 aa23.29■■□□□ 1.32
LDB1-202ENST00000425280 PRRG4Q9BZD6 226 aa23.29■■□□□ 1.32
LDB1-202ENST00000425280 RHBDL2Q9NX52 303 aa23.29■■□□□ 1.32
LDB1-202ENST00000425280 CAMK2AQ9UQM7 478 aa23.29■■□□□ 1.32
LDB1-202ENST00000425280 CEACAM4O75871 244 aa23.29■■□□□ 1.32
LDB1-202ENST00000425280 ITGA5P08648 1049 aa23.29■■□□□ 1.32
LDB1-202ENST00000425280 C11orf91Q3C1V1 193 aa23.29■■□□□ 1.32
LDB1-202ENST00000425280 TSPO2Q5TGU0 170 aa23.29■■□□□ 1.32
LDB1-202ENST00000425280 BAIAP2L2Q6UXY1 529 aa23.29■■□□□ 1.32
LDB1-202ENST00000425280 FAM57BQ71RH2 274 aa23.29■■□□□ 1.32
LDB1-202ENST00000425280 PRSS45Q7RTY3 260 aa23.29■■□□□ 1.32
LDB1-202ENST00000425280 NEDD4LQ96PU5 975 aa23.29■■□□□ 1.32
LDB1-202ENST00000425280 FOXB1Q99853 325 aa23.29■■□□□ 1.32
LDB1-202ENST00000425280 ABCG5Q9H222 651 aa23.29■■□□□ 1.32
LDB1-202ENST00000425280 CDV3Q9UKY7 258 aaKnown RBP23.29■■□□□ 1.32
LDB1-202ENST00000425280 A0A1B0GVI7 797 aa23.28■■□□□ 1.32
LDB1-202ENST00000425280 B4GALT1P15291 398 aa23.28■■□□□ 1.32
LDB1-202ENST00000425280 RSPO1Q2MKA7 263 aaPredicted RBP23.28■■□□□ 1.32
LDB1-202ENST00000425280 OR1J2Q8NGS2 313 aa23.28■■□□□ 1.32
LDB1-202ENST00000425280 SYNPRQ8TBG9 265 aa23.28■■□□□ 1.32
LDB1-202ENST00000425280 WDYHV1Q96HA8 205 aa23.28■■□□□ 1.32
LDB1-202ENST00000425280 SLCO5A1Q9H2Y9 848 aa23.28■■□□□ 1.32
LDB1-202ENST00000425280 SLC17A2O00624 439 aa23.28■■□□□ 1.32
LDB1-202ENST00000425280 LANCL1O43813 399 aa23.28■■□□□ 1.32
LDB1-202ENST00000425280 CD37P11049 281 aa23.28■■□□□ 1.32
LDB1-202ENST00000425280 FAM166AQ6J272 317 aa23.28■■□□□ 1.32
LDB1-202ENST00000425280 IZUMO1Q8IYV9 350 aa23.28■■□□□ 1.32
LDB1-202ENST00000425280 CADM3Q8N126 398 aa23.28■■□□□ 1.32
LDB1-202ENST00000425280 TRIM63Q969Q1 353 aa23.28■■□□□ 1.32
LDB1-202ENST00000425280 ADAT3Q96EY9 351 aaPredicted RBP23.28■■□□□ 1.32
LDB1-202ENST00000425280 THAP7Q9BT49 309 aaPredicted RBP23.28■■□□□ 1.32
LDB1-202ENST00000425280 SLC22A4Q9H015 551 aa23.28■■□□□ 1.32
LDB1-202ENST00000425280 CALHM2Q9HA72 323 aa23.28■■□□□ 1.32
LDB1-202ENST00000425280 BCO1Q9HAY6 547 aa23.28■■□□□ 1.32
LDB1-202ENST00000425280 PLEK2Q9NYT0 353 aa23.28■■□□□ 1.32
LDB1-202ENST00000425280 MRPS7Q9Y2R9 242 aaKnown RBP23.28■■□□□ 1.32
LDB1-202ENST00000425280 CPN1P15169 458 aa23.27■■□□□ 1.32
LDB1-202ENST00000425280 SCAND1P57086 179 aa23.27■■□□□ 1.32
LDB1-202ENST00000425280 GLT8D1Q68CQ7 371 aa23.27■■□□□ 1.32
LDB1-202ENST00000425280 RFT1Q96AA3 541 aa23.27■■□□□ 1.32
LDB1-202ENST00000425280 LINC00470Q9BZP3 86 aa23.27■■□□□ 1.32
LDB1-202ENST00000425280 HDHD2Q9H0R4 259 aa23.27■■□□□ 1.32
LDB1-202ENST00000425280 RNF122Q9H9V4 155 aa23.27■■□□□ 1.32
LDB1-202ENST00000425280 PARPBPQ9NWS1 579 aa23.27■■□□□ 1.32
LDB1-202ENST00000425280 ZNF724A8MTY0 619 aa23.26■■□□□ 1.31
LDB1-202ENST00000425280 F5H5K5 113 aa23.26■■□□□ 1.31
LDB1-202ENST00000425280 IGHV3-9P01782 118 aa23.26■■□□□ 1.31
LDB1-202ENST00000425280 OTX1P32242 354 aaPredicted RBP23.26■■□□□ 1.31
LDB1-202ENST00000425280 PITPNAQ00169 270 aa23.26■■□□□ 1.31
LDB1-202ENST00000425280 SPOCK1Q08629 439 aa23.26■■□□□ 1.31
LDB1-202ENST00000425280 RAB11BQ15907 218 aa23.26■■□□□ 1.31
LDB1-202ENST00000425280 CHMP1BQ7LBR1 199 aa23.26■■□□□ 1.31
LDB1-202ENST00000425280 ABHD12BQ7Z5M8 362 aaPredicted RBP23.26■■□□□ 1.31
LDB1-202ENST00000425280 NAA40Q86UY6 237 aa23.26■■□□□ 1.31
LDB1-202ENST00000425280 SLC22A24Q8N4F4 322 aa23.26■■□□□ 1.31
LDB1-202ENST00000425280 SLC7A6Q92536 515 aa23.26■■□□□ 1.31
LDB1-202ENST00000425280 NKX3-1Q99801 234 aaPredicted RBP23.26■■□□□ 1.31
LDB1-202ENST00000425280 SOX7Q9BT81 388 aa23.26■■□□□ 1.31
LDB1-202ENST00000425280 GPR84Q9NQS5 396 aa23.26■■□□□ 1.31
LDB1-202ENST00000425280 TRAV17A0A0B4J275 112 aa23.26■■□□□ 1.31
LDB1-202ENST00000425280 MEGF11A6BM72 1044 aa23.26■■□□□ 1.31
LDB1-202ENST00000425280 E9PLN8 166 aa23.26■■□□□ 1.31
LDB1-202ENST00000425280 TFECO14948 347 aaPredicted RBP23.26■■□□□ 1.31
LDB1-202ENST00000425280 EEF1E1O43324 174 aaKnown RBP23.26■■□□□ 1.31
LDB1-202ENST00000425280 ART1P52961 327 aa23.26■■□□□ 1.31
LDB1-202ENST00000425280 PLA2G7Q13093 441 aa23.26■■□□□ 1.31
LDB1-202ENST00000425280 SERPINA12Q8IW75 414 aa23.26■■□□□ 1.31
LDB1-202ENST00000425280 CELF2-AS1Q8N7Q2 184 aa23.26■■□□□ 1.31
LDB1-202ENST00000425280 OR51D1Q8NGF3 324 aa23.26■■□□□ 1.31
LDB1-202ENST00000425280 RAB40AQ8WXH6 277 aa23.26■■□□□ 1.31
LDB1-202ENST00000425280 ZFP3Q96NJ6 502 aa23.26■■□□□ 1.31
LDB1-202ENST00000425280 SLC7A10Q9NS82 523 aa23.26■■□□□ 1.31
LDB1-202ENST00000425280 ASPMQ8IZT6 3477 aa23.26■■□□□ 1.31
LDB1-202ENST00000425280 C5orf63A6NC05 138 aa23.25■■□□□ 1.31
LDB1-202ENST00000425280 KRT33AO76009 404 aa23.25■■□□□ 1.31
LDB1-202ENST00000425280 CCL1P22362 96 aa23.25■■□□□ 1.31
LDB1-202ENST00000425280 INPP1P49441 399 aa23.25■■□□□ 1.31
LDB1-202ENST00000425280 MMP15P51511 669 aa23.25■■□□□ 1.31
LDB1-202ENST00000425280 RAB35Q15286 201 aa23.25■■□□□ 1.31
LDB1-202ENST00000425280 RNPS1Q15287 305 aaKnown RBP23.25■■□□□ 1.31
LDB1-202ENST00000425280 COMMD2Q86X83 199 aa23.25■■□□□ 1.31
LDB1-202ENST00000425280 UBE2J2Q8N2K1 259 aa23.25■■□□□ 1.31
LDB1-202ENST00000425280 SGCEO43556 437 aa23.24■■□□□ 1.31
LDB1-202ENST00000425280 SLC25A28Q96A46 364 aa23.24■■□□□ 1.31
LDB1-202ENST00000425280 HAVCR1Q96D42 359 aa23.24■■□□□ 1.31
LDB1-202ENST00000425280 S100A16Q96FQ6 103 aaKnown RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms