RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 PARGQ86W56 976 aa13.6□□□□□ -0.23
C9orf3-204ENST00000424143 ZNF248Q8NDW4 579 aa13.6□□□□□ -0.23
C9orf3-204ENST00000424143 OR1M1Q8NGA1 313 aa13.6□□□□□ -0.23
C9orf3-204ENST00000424143 GPR119Q8TDV5 335 aa13.6□□□□□ -0.23
C9orf3-204ENST00000424143 PPP1R14AQ96A00 147 aa13.6□□□□□ -0.23
C9orf3-204ENST00000424143 SEC22AQ96IW7 307 aa13.6□□□□□ -0.23
C9orf3-204ENST00000424143 AQP10Q96PS8 301 aa13.6□□□□□ -0.23
C9orf3-204ENST00000424143 ADOQ96SZ5 270 aa13.6□□□□□ -0.23
C9orf3-204ENST00000424143 EMC9Q9Y3B6 208 aa13.6□□□□□ -0.23
C9orf3-204ENST00000424143 C11orf98E9PRG8 122 aa13.59□□□□□ -0.23
C9orf3-204ENST00000424143 TAAR5O14804 337 aa13.59□□□□□ -0.23
C9orf3-204ENST00000424143 IFNA6P05013 189 aa13.59□□□□□ -0.23
C9orf3-204ENST00000424143 FAM157CP0CG43 387 aa13.59□□□□□ -0.23
C9orf3-204ENST00000424143 IL12BP29460 328 aa13.59□□□□□ -0.23
C9orf3-204ENST00000424143 CTHP32929 405 aa13.59□□□□□ -0.23
C9orf3-204ENST00000424143 CAPZBP47756 277 aa13.59□□□□□ -0.23
C9orf3-204ENST00000424143 NR0B1P51843 470 aaKnown RBP13.59□□□□□ -0.23
C9orf3-204ENST00000424143 SPOCK1Q08629 439 aa13.59□□□□□ -0.23
C9orf3-204ENST00000424143 C1QL3Q5VWW1 255 aa13.59□□□□□ -0.23
C9orf3-204ENST00000424143 EIF5AL1Q6IS14 154 aaKnown RBP13.59□□□□□ -0.23
C9orf3-204ENST00000424143 PRSS54Q6PEW0 395 aa13.59□□□□□ -0.23
C9orf3-204ENST00000424143 KDF1Q8NAX2 398 aaPredicted RBP13.59□□□□□ -0.23
C9orf3-204ENST00000424143 OR10R2Q8NGX6 335 aa13.59□□□□□ -0.23
C9orf3-204ENST00000424143 TERB2Q8NHR7 220 aa13.59□□□□□ -0.23
C9orf3-204ENST00000424143 ASB10Q8WXI3 467 aa13.59□□□□□ -0.23
C9orf3-204ENST00000424143 RAB33BQ9H082 229 aa13.59□□□□□ -0.23
C9orf3-204ENST00000424143 TCEAL2Q9H3H9 227 aaPredicted RBP13.59□□□□□ -0.23
C9orf3-204ENST00000424143 CNTD2Q9H8S5 307 aa13.59□□□□□ -0.23
C9orf3-204ENST00000424143 MOB1AQ9H8S9 216 aa13.59□□□□□ -0.23
C9orf3-204ENST00000424143 KLHL13Q9P2N7 655 aa13.59□□□□□ -0.23
C9orf3-204ENST00000424143 MLXQ9UH92 298 aa13.59□□□□□ -0.23
C9orf3-204ENST00000424143 GTF2A1LQ9UNN4 478 aa13.59□□□□□ -0.23
C9orf3-204ENST00000424143 GPR132Q9UNW8 380 aa13.59□□□□□ -0.23
C9orf3-204ENST00000424143 COA3Q9Y2R0 106 aaPredicted RBP13.59□□□□□ -0.23
C9orf3-204ENST00000424143 TMEM269A0A1B0GVZ9 245 aa13.58□□□□□ -0.24
C9orf3-204ENST00000424143 FADS1O60427 444 aa13.58□□□□□ -0.24
C9orf3-204ENST00000424143 SEMA4FO95754 770 aa13.58□□□□□ -0.24
C9orf3-204ENST00000424143 PLGP00747 810 aaPredicted RBP13.58□□□□□ -0.24
C9orf3-204ENST00000424143 FOLR2P14207 255 aa13.58□□□□□ -0.24
C9orf3-204ENST00000424143 RAB13P51153 203 aa13.58□□□□□ -0.24
C9orf3-204ENST00000424143 AIMP2Q13155 320 aaKnown RBP13.58□□□□□ -0.24
C9orf3-204ENST00000424143 UNC119Q13432 240 aa13.58□□□□□ -0.24
C9orf3-204ENST00000424143 FZD2Q14332 565 aa13.58□□□□□ -0.24
C9orf3-204ENST00000424143 EBPQ15125 230 aaKnown RBP13.58□□□□□ -0.24
C9orf3-204ENST00000424143 PLEKHN1Q494U1 663 aaPredicted RBP13.58□□□□□ -0.24
C9orf3-204ENST00000424143 CHRDL2Q6WN34 429 aa13.58□□□□□ -0.24
C9orf3-204ENST00000424143 PEG10Q86TG7 708 aaKnown RBP13.58□□□□□ -0.24
C9orf3-204ENST00000424143 MFSD8Q8NHS3 518 aa13.58□□□□□ -0.24
C9orf3-204ENST00000424143 TMEM234Q8WY98 164 aa13.58□□□□□ -0.24
C9orf3-204ENST00000424143 SMIM8Q96KF7 97 aa13.58□□□□□ -0.24
C9orf3-204ENST00000424143 KCNK17Q96T54 332 aa13.58□□□□□ -0.24
C9orf3-204ENST00000424143 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.58□□□□□ -0.24
C9orf3-204ENST00000424143 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.58□□□□□ -0.24
C9orf3-204ENST00000424143 ZFP57Q9NU63 452 aa13.58□□□□□ -0.24
C9orf3-204ENST00000424143 ASF1BQ9NVP2 202 aa13.58□□□□□ -0.24
C9orf3-204ENST00000424143 FAM206AQ9NX38 181 aa13.58□□□□□ -0.24
C9orf3-204ENST00000424143 SPTBP11277 2137 aa13.58□□□□□ -0.24
C9orf3-204ENST00000424143 CCSO14618 274 aa13.57□□□□□ -0.24
C9orf3-204ENST00000424143 SFT2D2O95562 160 aa13.57□□□□□ -0.24
C9orf3-204ENST00000424143 VSIG8P0DPA2 414 aa13.57□□□□□ -0.24
C9orf3-204ENST00000424143 CTSEP14091 401 aa13.57□□□□□ -0.24
C9orf3-204ENST00000424143 ADCYAP1P18509 176 aa13.57□□□□□ -0.24
C9orf3-204ENST00000424143 PVALBP20472 110 aaPredicted RBP13.57□□□□□ -0.24
C9orf3-204ENST00000424143 ABCD3P28288 659 aa13.57□□□□□ -0.24
C9orf3-204ENST00000424143 SERPINF1P36955 418 aa13.57□□□□□ -0.24
C9orf3-204ENST00000424143 SRSF5Q13243 272 aaKnown RBP13.57□□□□□ -0.24
C9orf3-204ENST00000424143 NKPD1Q17RQ9 610 aa13.57□□□□□ -0.24
C9orf3-204ENST00000424143 NAA40Q86UY6 237 aa13.57□□□□□ -0.24
C9orf3-204ENST00000424143 CD163Q86VB7 1156 aa13.57□□□□□ -0.24
C9orf3-204ENST00000424143 CARFQ8N187 725 aa13.57□□□□□ -0.24
C9orf3-204ENST00000424143 KDM8Q8N371 416 aa13.57□□□□□ -0.24
C9orf3-204ENST00000424143 ZNF441Q8N8Z8 693 aa13.57□□□□□ -0.24
C9orf3-204ENST00000424143 OR4S1Q8NGB4 309 aa13.57□□□□□ -0.24
C9orf3-204ENST00000424143 OR5D14Q8NGL3 314 aa13.57□□□□□ -0.24
C9orf3-204ENST00000424143 ST8SIA1Q92185 356 aa13.57□□□□□ -0.24
C9orf3-204ENST00000424143 KLHDC3Q9BQ90 382 aa13.57□□□□□ -0.24
C9orf3-204ENST00000424143 OCSTAMPQ9BR26 566 aa13.57□□□□□ -0.24
C9orf3-204ENST00000424143 TBL1XR1Q9BZK7 514 aa13.57□□□□□ -0.24
C9orf3-204ENST00000424143 IFT22Q9H7X7 185 aa13.57□□□□□ -0.24
C9orf3-204ENST00000424143 ATPIF1Q9UII2 106 aa13.57□□□□□ -0.24
C9orf3-204ENST00000424143 CSAG2Q9Y5P2 127 aa13.57□□□□□ -0.24
C9orf3-204ENST00000424143 SSX5O60225 188 aa13.57□□□□□ -0.24
C9orf3-204ENST00000424143 IGHV4-34P06331 123 aa13.57□□□□□ -0.24
C9orf3-204ENST00000424143 PET100P0DJ07 73 aa13.57□□□□□ -0.24
C9orf3-204ENST00000424143 PGAM2P15259 253 aa13.57□□□□□ -0.24
C9orf3-204ENST00000424143 ABOP16442 354 aa13.57□□□□□ -0.24
C9orf3-204ENST00000424143 HRH1P35367 487 aa13.57□□□□□ -0.24
C9orf3-204ENST00000424143 CSNK1EP49674 416 aaKnown RBP13.57□□□□□ -0.24
C9orf3-204ENST00000424143 SUMO3P55854 103 aaPredicted RBP13.57□□□□□ -0.24
C9orf3-204ENST00000424143 IL15RAQ13261 267 aa13.57□□□□□ -0.24
C9orf3-204ENST00000424143 TSC22D1Q15714 1073 aa13.57□□□□□ -0.24
C9orf3-204ENST00000424143 MST1LQ2TV78 715 aa13.57□□□□□ -0.24
C9orf3-204ENST00000424143 ZNF528Q3MIS6 628 aa13.57□□□□□ -0.24
C9orf3-204ENST00000424143 HLA-DQA1Q5Y7H0 255 aa13.57□□□□□ -0.24
C9orf3-204ENST00000424143 KIAA0895LQ68EN5 471 aa13.57□□□□□ -0.24
C9orf3-204ENST00000424143 MDGA2Q7Z553 956 aa13.57□□□□□ -0.24
C9orf3-204ENST00000424143 MARCH3Q86UD3 253 aa13.57□□□□□ -0.24
C9orf3-204ENST00000424143 ACBD4Q8NC06 268 aa13.57□□□□□ -0.24
C9orf3-204ENST00000424143 NUBPLQ8TB37 319 aa13.57□□□□□ -0.24
C9orf3-204ENST00000424143 RHBDD1Q8TEB9 315 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms