RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 MESTQ5EB52 335 aa12.78□□□□□ -0.36
DDX56-202ENST00000415758 HIST2H3PS2Q5TEC6 136 aa12.78□□□□□ -0.36
DDX56-202ENST00000415758 AGBL2Q5U5Z8 902 aa12.78□□□□□ -0.36
DDX56-202ENST00000415758 CD276Q5ZPR3 534 aa12.78□□□□□ -0.36
DDX56-202ENST00000415758 RUSC1-AS1Q66K80 236 aa12.78□□□□□ -0.36
DDX56-202ENST00000415758 COLCA1Q6ZS62 124 aa12.78□□□□□ -0.36
DDX56-202ENST00000415758 TMPRSS11FQ6ZWK6 438 aa12.78□□□□□ -0.36
DDX56-202ENST00000415758 HIST2H3AQ71DI3 136 aa12.78□□□□□ -0.36
DDX56-202ENST00000415758 GLB1L2Q8IW92 636 aa12.78□□□□□ -0.36
DDX56-202ENST00000415758 OFCC1Q8IZS5 231 aa12.78□□□□□ -0.36
DDX56-202ENST00000415758 TBC1D15Q8TC07 691 aa12.78□□□□□ -0.36
DDX56-202ENST00000415758 UBE2FQ969M7 185 aa12.78□□□□□ -0.36
DDX56-202ENST00000415758 PCGF1Q9BSM1 259 aa12.78□□□□□ -0.36
DDX56-202ENST00000415758 KIF17Q9P2E2 1029 aa12.78□□□□□ -0.36
DDX56-202ENST00000415758 SLC22A31A6NKX4 558 aa12.77□□□□□ -0.37
DDX56-202ENST00000415758 FXYD1O00168 92 aa12.77□□□□□ -0.37
DDX56-202ENST00000415758 RER1O15258 196 aa12.77□□□□□ -0.37
DDX56-202ENST00000415758 SFTPBP07988 381 aa12.77□□□□□ -0.37
DDX56-202ENST00000415758 IRF2P14316 349 aa12.77□□□□□ -0.37
DDX56-202ENST00000415758 RPL4P36578 427 aaKnown RBP12.77□□□□□ -0.37
DDX56-202ENST00000415758 RAD23AP54725 363 aa12.77□□□□□ -0.37
DDX56-202ENST00000415758 TRAM2Q15035 370 aa12.77□□□□□ -0.37
DDX56-202ENST00000415758 CLEC12AQ5QGZ9 265 aa12.77□□□□□ -0.37
DDX56-202ENST00000415758 METTL21CQ5VZV1 264 aa12.77□□□□□ -0.37
DDX56-202ENST00000415758 OR13C2Q8NGS9 318 aa12.77□□□□□ -0.37
DDX56-202ENST00000415758 ACOT11Q8WXI4 607 aaPredicted RBP12.77□□□□□ -0.37
DDX56-202ENST00000415758 GATAD2BQ8WXI9 593 aa12.77□□□□□ -0.37
DDX56-202ENST00000415758 TBX15Q96SF7 602 aa12.77□□□□□ -0.37
DDX56-202ENST00000415758 COQ7Q99807 217 aa12.77□□□□□ -0.37
DDX56-202ENST00000415758 NMNAT1Q9HAN9 279 aaPredicted RBP12.77□□□□□ -0.37
DDX56-202ENST00000415758 ACOXLQ9NUZ1 547 aa12.77□□□□□ -0.37
DDX56-202ENST00000415758 A0A087WUU8 490 aa12.76□□□□□ -0.37
DDX56-202ENST00000415758 IGHV3-64DA0A0J9YX35 117 aa12.76□□□□□ -0.37
DDX56-202ENST00000415758 CDC42EP2O14613 210 aa12.76□□□□□ -0.37
DDX56-202ENST00000415758 FFAR1O14842 300 aa12.76□□□□□ -0.37
DDX56-202ENST00000415758 SLC16A7O60669 478 aa12.76□□□□□ -0.37
DDX56-202ENST00000415758 KHDRBS3O75525 346 aaKnown RBP12.76□□□□□ -0.37
DDX56-202ENST00000415758 TOX4O94842 621 aa12.76□□□□□ -0.37
DDX56-202ENST00000415758 HLA-DPB1P04440 258 aa12.76□□□□□ -0.37
DDX56-202ENST00000415758 FPR3P25089 353 aa12.76□□□□□ -0.37
DDX56-202ENST00000415758 CD200P41217 278 aa12.76□□□□□ -0.37
DDX56-202ENST00000415758 IER3P46695 156 aa12.76□□□□□ -0.37
DDX56-202ENST00000415758 RSPO1Q2MKA7 263 aaPredicted RBP12.76□□□□□ -0.37
DDX56-202ENST00000415758 ZBED5Q49AG3 693 aa12.76□□□□□ -0.37
DDX56-202ENST00000415758 COQ5Q5HYK3 327 aa12.76□□□□□ -0.37
DDX56-202ENST00000415758 LDLRAD3Q86YD5 345 aa12.76□□□□□ -0.37
DDX56-202ENST00000415758 BHLHE23Q8NDY6 225 aa12.76□□□□□ -0.37
DDX56-202ENST00000415758 GJC3Q8NFK1 279 aa12.76□□□□□ -0.37
DDX56-202ENST00000415758 TPD52L3Q96J77 140 aa12.76□□□□□ -0.37
DDX56-202ENST00000415758 ZNF570Q96NI8 536 aa12.76□□□□□ -0.37
DDX56-202ENST00000415758 WDFY2Q96P53 400 aa12.76□□□□□ -0.37
DDX56-202ENST00000415758 FNDC11Q9BVV2 318 aa12.76□□□□□ -0.37
DDX56-202ENST00000415758 TRIM15Q9C019 465 aa12.76□□□□□ -0.37
DDX56-202ENST00000415758 HDHD2Q9H0R4 259 aa12.76□□□□□ -0.37
DDX56-202ENST00000415758 VSX1Q9NZR4 365 aaPredicted RBP12.76□□□□□ -0.37
DDX56-202ENST00000415758 TMCC3Q9ULS5 477 aa12.76□□□□□ -0.37
DDX56-202ENST00000415758 COA3Q9Y2R0 106 aaPredicted RBP12.76□□□□□ -0.37
DDX56-202ENST00000415758 GPR137BO60478 399 aa12.75□□□□□ -0.37
DDX56-202ENST00000415758 PTP4A3O75365 173 aa12.75□□□□□ -0.37
DDX56-202ENST00000415758 KCNJ8Q15842 424 aa12.75□□□□□ -0.37
DDX56-202ENST00000415758 C11orf91Q3C1V1 193 aa12.75□□□□□ -0.37
DDX56-202ENST00000415758 KRTAP27-1Q3LI81 207 aa12.75□□□□□ -0.37
DDX56-202ENST00000415758 LRRC23Q53EV4 343 aaPredicted RBP12.75□□□□□ -0.37
DDX56-202ENST00000415758 FBLN7Q53RD9 439 aa12.75□□□□□ -0.37
DDX56-202ENST00000415758 BEND6Q5SZJ8 279 aaPredicted RBP12.75□□□□□ -0.37
DDX56-202ENST00000415758 OTPQ5XKR4 325 aa12.75□□□□□ -0.37
DDX56-202ENST00000415758 GPR139Q6DWJ6 353 aa12.75□□□□□ -0.37
DDX56-202ENST00000415758 MBOAT2Q6ZWT7 520 aa12.75□□□□□ -0.37
DDX56-202ENST00000415758 PNLDC1Q8NA58 520 aaKnown RBP12.75□□□□□ -0.37
DDX56-202ENST00000415758 ZSCAN4Q8NAM6 433 aaPredicted RBP12.75□□□□□ -0.37
DDX56-202ENST00000415758 OR11L1Q8NGX0 322 aa12.75□□□□□ -0.37
DDX56-202ENST00000415758 HCAR1Q9BXC0 346 aa12.75□□□□□ -0.37
DDX56-202ENST00000415758 SYT4Q9H2B2 425 aa12.75□□□□□ -0.37
DDX56-202ENST00000415758 NRIP3Q9NQ35 241 aa12.75□□□□□ -0.37
DDX56-202ENST00000415758 ERVK-18Q9QC07 812 aa12.75□□□□□ -0.37
DDX56-202ENST00000415758 RHCGQ9UBD6 479 aa12.75□□□□□ -0.37
DDX56-202ENST00000415758 CTSZQ9UBR2 303 aa12.75□□□□□ -0.37
DDX56-202ENST00000415758 SNX13Q9Y5W8 968 aa12.75□□□□□ -0.37
DDX56-202ENST00000415758 IGHV1-69DA0A0B4J2H0 117 aa12.74□□□□□ -0.37
DDX56-202ENST00000415758 J3KTA2 159 aa12.74□□□□□ -0.37
DDX56-202ENST00000415758 NDUFA2O43678 99 aa12.74□□□□□ -0.37
DDX56-202ENST00000415758 FAM20BO75063 409 aa12.74□□□□□ -0.37
DDX56-202ENST00000415758 PTBP3O95758 552 aaKnown RBP12.74□□□□□ -0.37
DDX56-202ENST00000415758 IGHV1-69P01742 117 aa12.74□□□□□ -0.37
DDX56-202ENST00000415758 SDHAP31040 664 aa12.74□□□□□ -0.37
DDX56-202ENST00000415758 YAP1P46937 504 aaKnown RBP12.74□□□□□ -0.37
DDX56-202ENST00000415758 KRR1Q13601 381 aaKnown RBP12.74□□□□□ -0.37
DDX56-202ENST00000415758 MPPED2Q15777 294 aa12.74□□□□□ -0.37
DDX56-202ENST00000415758 PGM2L1Q6PCE3 622 aa12.74□□□□□ -0.37
DDX56-202ENST00000415758 TBPL2Q6SJ96 375 aa12.74□□□□□ -0.37
DDX56-202ENST00000415758 ZNF730Q6ZMV8 503 aa12.74□□□□□ -0.37
DDX56-202ENST00000415758 LZICQ8WZA0 190 aa12.74□□□□□ -0.37
DDX56-202ENST00000415758 GPX7Q96SL4 187 aaPredicted RBP12.74□□□□□ -0.37
DDX56-202ENST00000415758 SIKE1Q9BRV8 207 aa12.74□□□□□ -0.37
DDX56-202ENST00000415758 NUAK2Q9H093 628 aa12.74□□□□□ -0.37
DDX56-202ENST00000415758 SIRPDQ9H106 197 aa12.74□□□□□ -0.37
DDX56-202ENST00000415758 C16orf95Q9H693 158 aa12.74□□□□□ -0.37
DDX56-202ENST00000415758 WDR76Q9H967 626 aa12.74□□□□□ -0.37
DDX56-202ENST00000415758 TCF7L1Q9HCS4 588 aa12.74□□□□□ -0.37
DDX56-202ENST00000415758 LHFPL6Q9Y693 200 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms