RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 CPNE4Q96A23 557 aaPredicted RBP3.81□□□□□ -1.8
PTPRK-209ENST00000415046 CCDC124Q96CT7 223 aaKnown RBP3.81□□□□□ -1.8
PTPRK-209ENST00000415046 ZHX1-C8orf76Q96EF9 292 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 SLC47A1Q96FL8 570 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 ZNF300Q96RE9 604 aaPredicted RBP3.81□□□□□ -1.8
PTPRK-209ENST00000415046 TAPBPLQ9BX59 468 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 KLHL4Q9C0H6 718 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 GFRA4Q9GZZ7 299 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 CSTL1Q9H114 145 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 OPN3Q9H1Y3 402 aaPredicted RBP3.81□□□□□ -1.8
PTPRK-209ENST00000415046 TMEM27Q9HBJ8 222 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 KCNJ16Q9NPI9 418 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 TIGARQ9NQ88 270 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 SNTG1Q9NSN8 517 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 NDE1Q9NXR1 346 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 MRPL15Q9P015 296 aaKnown RBP3.81□□□□□ -1.8
PTPRK-209ENST00000415046 TMEM181Q9P2C4 612 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 RHCGQ9UBD6 479 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 ABCD2Q9UBJ2 740 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 SLC7A7Q9UM01 511 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 AP3M1Q9Y2T2 418 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 ZNF175Q9Y473 711 aa3.81□□□□□ -1.8
PTPRK-209ENST00000415046 ZANQ9Y493 2812 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 IGKV1D-42A0A075B6H8 117 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 A0A0B4J2E0 115 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 A0A1B0GX12 115 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 TRAPPC13A5PLN9 417 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 A8MVM7 634 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 LRRN3E7EW58 273 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 CTDSP2O14595 271 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 GYG2O15488 501 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 CHP2O43745 196 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 FMO6PO60774 539 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 TNFSF13O75888 250 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 DIRAS1O95057 198 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 RCBTB2O95199 551 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 LYPD3O95274 346 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 IGHV3-9P01782 118 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 MT-ND1P03886 318 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 IFNW1P05000 195 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 UMPSP11172 480 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 HSD17B1P14061 328 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 COX6B1P14854 86 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 NQO1P15559 274 aaKnown RBP3.8□□□□□ -1.8
PTPRK-209ENST00000415046 CDH2P19022 906 aaPredicted RBP3.8□□□□□ -1.8
PTPRK-209ENST00000415046 GRPRP30550 384 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 AGTR1P30556 359 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 OPRM1P35372 400 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 LINC01547P58512 204 aaPredicted RBP3.8□□□□□ -1.8
PTPRK-209ENST00000415046 SELENOWP63302 87 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 SLC35A1P78382 337 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 IFI44LQ53G44 452 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 FGD3Q5JSP0 725 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 EEF1A1P5Q5VTE0 462 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 TTC33Q6PID6 262 aaPredicted RBP3.8□□□□□ -1.8
PTPRK-209ENST00000415046 CASP12Q6UXS9 341 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 WDR88Q6ZMY6 472 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 TMPPEQ6ZT21 453 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 NUFIP2Q7Z417 695 aaKnown RBP3.8□□□□□ -1.8
PTPRK-209ENST00000415046 GPAT4Q86UL3 456 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 TMEM219Q86XT9 240 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 TUSC5Q8IXB3 177 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 KDM8Q8N371 416 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 LILRB4Q8NHJ6 448 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 ADAMTS16Q8TE57 1224 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 RNF128Q8TEB7 428 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 DNAJA4Q8WW22 397 aaPredicted RBP3.8□□□□□ -1.8
PTPRK-209ENST00000415046 GEMIN6Q8WXD5 167 aaKnown RBP3.8□□□□□ -1.8
PTPRK-209ENST00000415046 SLC38A4Q969I6 547 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 TAAR8Q969N4 342 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 SLC35B4Q969S0 331 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 SLC41A3Q96GZ6 507 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 GMPPAQ96IJ6 420 aaPredicted RBP3.8□□□□□ -1.8
PTPRK-209ENST00000415046 NSMCE2Q96MF7 247 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 ZFP3Q96NJ6 502 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 ABHD1Q96SE0 405 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 SEPHS2Q99611 448 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 NAA11Q9BSU3 229 aaPredicted RBP3.8□□□□□ -1.8
PTPRK-209ENST00000415046 THTPAQ9BU02 230 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 FNDC11Q9BVV2 318 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 RBM4Q9BWF3 364 aaKnown RBP3.8□□□□□ -1.8
PTPRK-209ENST00000415046 SFXN3Q9BWM7 321 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 RBM24Q9BX46 236 aaKnown RBP3.8□□□□□ -1.8
PTPRK-209ENST00000415046 RNF122Q9H9V4 155 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 PAQR5Q9NXK6 330 aaPredicted RBP3.8□□□□□ -1.8
PTPRK-209ENST00000415046 KIAA1456Q9P272 454 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 SEC14L4Q9UDX3 406 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 RIMS3Q9UJD0 308 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 POU2F3Q9UKI9 436 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 HDGFL3Q9Y3E1 203 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 SETD2Q9BYW2 2564 aaPredicted RBP3.8□□□□□ -1.8
PTPRK-209ENST00000415046 MTORP42345 2549 aa3.8□□□□□ -1.8
PTPRK-209ENST00000415046 CELSR1Q9NYQ6 3014 aa3.79□□□□□ -1.8
PTPRK-209ENST00000415046 DOCK11Q5JSL3 2073 aa3.79□□□□□ -1.8
PTPRK-209ENST00000415046 F8P00451 2351 aa3.79□□□□□ -1.8
PTPRK-209ENST00000415046 TRAV36DV7A0A075B6V5 113 aa3.79□□□□□ -1.8
PTPRK-209ENST00000415046 A0A087WUJ7 227 aa3.79□□□□□ -1.8
PTPRK-209ENST00000415046 ENO4A6NNW6 628 aa3.79□□□□□ -1.8
PTPRK-209ENST00000415046 ZNF716A6NP11 495 aa3.79□□□□□ -1.8
PTPRK-209ENST00000415046 C11orf98E9PRG8 122 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms