RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 SELENOWP63302 87 aa10.09□□□□□ -0.79
LIMS2-210ENST00000413578 PDCD1Q15116 288 aa10.09□□□□□ -0.79
LIMS2-210ENST00000413578 KCNMB1Q16558 191 aa10.09□□□□□ -0.79
LIMS2-210ENST00000413578 COQ5Q5HYK3 327 aa10.09□□□□□ -0.79
LIMS2-210ENST00000413578 TMPRSS11FQ6ZWK6 438 aa10.09□□□□□ -0.79
LIMS2-210ENST00000413578 RNF113BQ8IZP6 322 aaKnown RBP10.09□□□□□ -0.79
LIMS2-210ENST00000413578 C1orf87Q8N0U7 546 aa10.09□□□□□ -0.79
LIMS2-210ENST00000413578 SSMEM1Q8WWF3 244 aa10.09□□□□□ -0.79
LIMS2-210ENST00000413578 ERGIC1Q969X5 290 aa10.09□□□□□ -0.79
LIMS2-210ENST00000413578 FAM71F1Q96KD3 344 aaPredicted RBP10.09□□□□□ -0.79
LIMS2-210ENST00000413578 ECSITQ9BQ95 431 aa10.09□□□□□ -0.79
LIMS2-210ENST00000413578 SYT4Q9H2B2 425 aa10.09□□□□□ -0.79
LIMS2-210ENST00000413578 TNFRSF19Q9NS68 423 aa10.09□□□□□ -0.79
LIMS2-210ENST00000413578 GRHPRQ9UBQ7 328 aa10.09□□□□□ -0.79
LIMS2-210ENST00000413578 COA3Q9Y2R0 106 aaPredicted RBP10.09□□□□□ -0.79
LIMS2-210ENST00000413578 DNAH3Q8TD57 4116 aa10.09□□□□□ -0.79
LIMS2-210ENST00000413578 FAM220BPB1ANY3 271 aa10.08□□□□□ -0.8
LIMS2-210ENST00000413578 ZNF879B4DU55 563 aa10.08□□□□□ -0.8
LIMS2-210ENST00000413578 P2RY10O00398 339 aa10.08□□□□□ -0.8
LIMS2-210ENST00000413578 XKRYO14609 159 aa10.08□□□□□ -0.8
LIMS2-210ENST00000413578 PTP4A3O75365 173 aa10.08□□□□□ -0.8
LIMS2-210ENST00000413578 PTBP3O95758 552 aaKnown RBP10.08□□□□□ -0.8
LIMS2-210ENST00000413578 HLA-DPB1P04440 258 aa10.08□□□□□ -0.8
LIMS2-210ENST00000413578 CRYBA1P05813 215 aa10.08□□□□□ -0.8
LIMS2-210ENST00000413578 CD200P41217 278 aa10.08□□□□□ -0.8
LIMS2-210ENST00000413578 YAP1P46937 504 aaKnown RBP10.08□□□□□ -0.8
LIMS2-210ENST00000413578 HOXA4Q00056 320 aaPredicted RBP10.08□□□□□ -0.8
LIMS2-210ENST00000413578 TRAM2Q15035 370 aa10.08□□□□□ -0.8
LIMS2-210ENST00000413578 ZBED5Q49AG3 693 aa10.08□□□□□ -0.8
LIMS2-210ENST00000413578 LRRC23Q53EV4 343 aaPredicted RBP10.08□□□□□ -0.8
LIMS2-210ENST00000413578 METTL21CQ5VZV1 264 aa10.08□□□□□ -0.8
LIMS2-210ENST00000413578 TBPL2Q6SJ96 375 aa10.08□□□□□ -0.8
LIMS2-210ENST00000413578 ZNF620Q6ZNG0 422 aa10.08□□□□□ -0.8
LIMS2-210ENST00000413578 MBOAT2Q6ZWT7 520 aa10.08□□□□□ -0.8
LIMS2-210ENST00000413578 LDLRAD3Q86YD5 345 aa10.08□□□□□ -0.8
LIMS2-210ENST00000413578 GLB1L2Q8IW92 636 aa10.08□□□□□ -0.8
LIMS2-210ENST00000413578 BHLHE23Q8NDY6 225 aa10.08□□□□□ -0.8
LIMS2-210ENST00000413578 OR5L1Q8NGL2 311 aa10.08□□□□□ -0.8
LIMS2-210ENST00000413578 ACOT11Q8WXI4 607 aaPredicted RBP10.08□□□□□ -0.8
LIMS2-210ENST00000413578 DYRK2Q92630 601 aa10.08□□□□□ -0.8
LIMS2-210ENST00000413578 ZNF570Q96NI8 536 aa10.08□□□□□ -0.8
LIMS2-210ENST00000413578 GPX7Q96SL4 187 aaPredicted RBP10.08□□□□□ -0.8
LIMS2-210ENST00000413578 COQ7Q99807 217 aa10.08□□□□□ -0.8
LIMS2-210ENST00000413578 HDHD2Q9H0R4 259 aa10.08□□□□□ -0.8
LIMS2-210ENST00000413578 NMNAT1Q9HAN9 279 aaPredicted RBP10.08□□□□□ -0.8
LIMS2-210ENST00000413578 NRIP3Q9NQ35 241 aa10.08□□□□□ -0.8
LIMS2-210ENST00000413578 RHCGQ9UBD6 479 aa10.08□□□□□ -0.8
LIMS2-210ENST00000413578 RNF114Q9Y508 228 aa10.08□□□□□ -0.8
LIMS2-210ENST00000413578 LHFPL6Q9Y693 200 aa10.08□□□□□ -0.8
LIMS2-210ENST00000413578 SLC22A31A6NKX4 558 aa10.07□□□□□ -0.8
LIMS2-210ENST00000413578 GPR137BO60478 399 aa10.07□□□□□ -0.8
LIMS2-210ENST00000413578 SLC16A7O60669 478 aa10.07□□□□□ -0.8
LIMS2-210ENST00000413578 FAM20BO75063 409 aa10.07□□□□□ -0.8
LIMS2-210ENST00000413578 KHDRBS3O75525 346 aaKnown RBP10.07□□□□□ -0.8
LIMS2-210ENST00000413578 FCN3O75636 299 aa10.07□□□□□ -0.8
LIMS2-210ENST00000413578 NPPAP01160 153 aa10.07□□□□□ -0.8
LIMS2-210ENST00000413578 LIPFP07098 398 aa10.07□□□□□ -0.8
LIMS2-210ENST00000413578 FPR3P25089 353 aa10.07□□□□□ -0.8
LIMS2-210ENST00000413578 IFNA8P32881 189 aa10.07□□□□□ -0.8
LIMS2-210ENST00000413578 RPL4P36578 427 aaKnown RBP10.07□□□□□ -0.8
LIMS2-210ENST00000413578 GPR4P46093 362 aa10.07□□□□□ -0.8
LIMS2-210ENST00000413578 NPY4RP50391 375 aa10.07□□□□□ -0.8
LIMS2-210ENST00000413578 FXYD6P3P58550 94 aa10.07□□□□□ -0.8
LIMS2-210ENST00000413578 KRR1Q13601 381 aaKnown RBP10.07□□□□□ -0.8
LIMS2-210ENST00000413578 TAF9Q16594 264 aa10.07□□□□□ -0.8
LIMS2-210ENST00000413578 TTMPQ5BVD1 217 aa10.07□□□□□ -0.8
LIMS2-210ENST00000413578 PTCHD4Q6ZW05 846 aa10.07□□□□□ -0.8
LIMS2-210ENST00000413578 TSEN54Q7Z6J9 526 aaKnown RBP10.07□□□□□ -0.8
LIMS2-210ENST00000413578 VTCN1Q7Z7D3 282 aa10.07□□□□□ -0.8
LIMS2-210ENST00000413578 C19orf18Q8NEA5 215 aa10.07□□□□□ -0.8
LIMS2-210ENST00000413578 TPD52L3Q96J77 140 aa10.07□□□□□ -0.8
LIMS2-210ENST00000413578 ATP6V1G3Q96LB4 118 aa10.07□□□□□ -0.8
LIMS2-210ENST00000413578 PCGF1Q9BSM1 259 aa10.07□□□□□ -0.8
LIMS2-210ENST00000413578 FNDC11Q9BVV2 318 aa10.07□□□□□ -0.8
LIMS2-210ENST00000413578 SIRPDQ9H106 197 aa10.07□□□□□ -0.8
LIMS2-210ENST00000413578 WDR76Q9H967 626 aa10.07□□□□□ -0.8
LIMS2-210ENST00000413578 ACOXLQ9NUZ1 547 aa10.07□□□□□ -0.8
LIMS2-210ENST00000413578 TMEM100Q9NV29 134 aa10.07□□□□□ -0.8
LIMS2-210ENST00000413578 TMCC3Q9ULS5 477 aa10.07□□□□□ -0.8
LIMS2-210ENST00000413578 SIGLEC7Q9Y286 467 aa10.07□□□□□ -0.8
LIMS2-210ENST00000413578 ZNF281Q9Y2X9 895 aa10.07□□□□□ -0.8
LIMS2-210ENST00000413578 DCTN6O00399 190 aa10.06□□□□□ -0.8
LIMS2-210ENST00000413578 PPP1R3DO95685 299 aa10.06□□□□□ -0.8
LIMS2-210ENST00000413578 TSPAN15O95858 294 aa10.06□□□□□ -0.8
LIMS2-210ENST00000413578 TXNDC12O95881 172 aa10.06□□□□□ -0.8
LIMS2-210ENST00000413578 SDHAP31040 664 aa10.06□□□□□ -0.8
LIMS2-210ENST00000413578 IER3P46695 156 aa10.06□□□□□ -0.8
LIMS2-210ENST00000413578 PRSS12P56730 875 aa10.06□□□□□ -0.8
LIMS2-210ENST00000413578 COX10Q12887 443 aa10.06□□□□□ -0.8
LIMS2-210ENST00000413578 GK2Q14410 553 aaPredicted RBP10.06□□□□□ -0.8
LIMS2-210ENST00000413578 MPPED2Q15777 294 aa10.06□□□□□ -0.8
LIMS2-210ENST00000413578 MEP1BQ16820 701 aa10.06□□□□□ -0.8
LIMS2-210ENST00000413578 PRAMEF6Q5VXH4 476 aa10.06□□□□□ -0.8
LIMS2-210ENST00000413578 GPR139Q6DWJ6 353 aa10.06□□□□□ -0.8
LIMS2-210ENST00000413578 ADCK1Q86TW2 530 aa10.06□□□□□ -0.8
LIMS2-210ENST00000413578 ZSCAN4Q8NAM6 433 aaPredicted RBP10.06□□□□□ -0.8
LIMS2-210ENST00000413578 OR2T12Q8NG77 320 aa10.06□□□□□ -0.8
LIMS2-210ENST00000413578 GATAD2BQ8WXI9 593 aa10.06□□□□□ -0.8
LIMS2-210ENST00000413578 WDFY2Q96P53 400 aa10.06□□□□□ -0.8
LIMS2-210ENST00000413578 SIKE1Q9BRV8 207 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms