RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 PKD1L3Q7Z443 1732 aa11.11□□□□□ -0.63
SHANK2-203ENST00000409161 ZNF816-ZNF321PA0A0X1KG74 233 aa11.11□□□□□ -0.63
SHANK2-203ENST00000409161 RGS13O14921 159 aa11.11□□□□□ -0.63
SHANK2-203ENST00000409161 EVX1P49640 407 aa11.11□□□□□ -0.63
SHANK2-203ENST00000409161 EDDM3BP56851 147 aa11.11□□□□□ -0.63
SHANK2-203ENST00000409161 SPCS3P61009 180 aa11.11□□□□□ -0.63
SHANK2-203ENST00000409161 PITX1P78337 314 aaPredicted RBP11.11□□□□□ -0.63
SHANK2-203ENST00000409161 COL9A3Q14050 684 aaPredicted RBP11.11□□□□□ -0.63
SHANK2-203ENST00000409161 SPRED3Q2MJR0 410 aa11.11□□□□□ -0.63
SHANK2-203ENST00000409161 C1orf220Q5T0J3 134 aa11.11□□□□□ -0.63
SHANK2-203ENST00000409161 UBAC2Q8NBM4 344 aa11.11□□□□□ -0.63
SHANK2-203ENST00000409161 CCDC74AQ96AQ1 378 aa11.11□□□□□ -0.63
SHANK2-203ENST00000409161 G0S2P27469 103 aa11.11□□□□□ -0.63
SHANK2-203ENST00000409161 PGGT1BP53609 377 aa11.11□□□□□ -0.63
SHANK2-203ENST00000409161 ADPRHP54922 357 aa11.11□□□□□ -0.63
SHANK2-203ENST00000409161 SLC35G1Q2M3R5 365 aa11.11□□□□□ -0.63
SHANK2-203ENST00000409161 C1orf140Q5VVS0 124 aa11.11□□□□□ -0.63
SHANK2-203ENST00000409161 KLRC4-KLRK1H3BQV0 150 aa11.11□□□□□ -0.63
SHANK2-203ENST00000409161 HCRTR1O43613 425 aa11.11□□□□□ -0.63
SHANK2-203ENST00000409161 FZD6O60353 706 aa11.11□□□□□ -0.63
SHANK2-203ENST00000409161 SLC25A6P12236 298 aa11.11□□□□□ -0.63
SHANK2-203ENST00000409161 TMEM11P17152 192 aa11.11□□□□□ -0.63
SHANK2-203ENST00000409161 GALP22466 123 aa11.11□□□□□ -0.63
SHANK2-203ENST00000409161 AGFG1P52594 562 aaKnown RBP11.11□□□□□ -0.63
SHANK2-203ENST00000409161 GABRG1Q8N1C3 465 aa11.11□□□□□ -0.63
SHANK2-203ENST00000409161 RELL2Q8NC24 303 aaPredicted RBP11.11□□□□□ -0.63
SHANK2-203ENST00000409161 RASD2Q96D21 266 aa11.11□□□□□ -0.63
SHANK2-203ENST00000409161 FER1L6-AS2Q96M78 137 aa11.11□□□□□ -0.63
SHANK2-203ENST00000409161 ELOA3CA0A087WX78 387 aaPredicted RBP11.11□□□□□ -0.63
SHANK2-203ENST00000409161 AREGP15514 252 aa11.11□□□□□ -0.63
SHANK2-203ENST00000409161 TOMM20LQ6UXN7 152 aa11.11□□□□□ -0.63
SHANK2-203ENST00000409161 HSD11B1LQ7Z5J1 315 aa11.11□□□□□ -0.63
SHANK2-203ENST00000409161 DND1Q8IYX4 353 aaKnown RBP11.11□□□□□ -0.63
SHANK2-203ENST00000409161 BCL2L2Q92843 193 aaPredicted RBP11.11□□□□□ -0.63
SHANK2-203ENST00000409161 ZNF2Q9BSG1 426 aaPredicted RBP11.11□□□□□ -0.63
SHANK2-203ENST00000409161 TOX3O15405 576 aaPredicted RBP11.11□□□□□ -0.63
SHANK2-203ENST00000409161 SNAI1O95863 264 aaPredicted RBP11.11□□□□□ -0.63
SHANK2-203ENST00000409161 PIGAP37287 484 aa11.11□□□□□ -0.63
SHANK2-203ENST00000409161 ZNF789Q5FWF6 425 aa11.11□□□□□ -0.63
SHANK2-203ENST00000409161 SPANXN5Q5MJ07 72 aa11.11□□□□□ -0.63
SHANK2-203ENST00000409161 ETFRF1Q6IPR1 90 aa11.11□□□□□ -0.63
SHANK2-203ENST00000409161 MFSD12Q6NUT3 480 aa11.11□□□□□ -0.63
SHANK2-203ENST00000409161 MAML2Q8IZL2 1156 aaPredicted RBP11.11□□□□□ -0.63
SHANK2-203ENST00000409161 DOK4Q8TEW6 326 aa11.11□□□□□ -0.63
SHANK2-203ENST00000409161 MPDZO75970 2070 aa11.11□□□□□ -0.63
SHANK2-203ENST00000409161 OR52A4PA6NMU1 304 aa11.11□□□□□ -0.63
SHANK2-203ENST00000409161 OR4E1P0C645 316 aa11.11□□□□□ -0.63
SHANK2-203ENST00000409161 MS4A8Q9BY19 250 aa11.11□□□□□ -0.63
SHANK2-203ENST00000409161 COX7A2P2O60397 106 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 PRSS56P0CW18 603 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 COX19Q49B96 90 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 CLLU1Q5K131 121 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 FAAP24Q9BTP7 215 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 ZNF768Q9H5H4 540 aaKnown RBP11.1□□□□□ -0.63
SHANK2-203ENST00000409161 CHST11Q9NPF2 352 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 SLCO2B1O94956 709 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 SMIM6P0DI80 62 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 HRH1P35367 487 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 NOVA1P51513 510 aaKnown RBP11.1□□□□□ -0.63
SHANK2-203ENST00000409161 TMEM128Q5BJH2 165 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 AGBL5Q8NDL9 886 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 OR51F2Q8NH61 342 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 TMEM255BQ8WV15 326 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 FOXN4Q96NZ1 517 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 IFITM5A6NNB3 132 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 CTSAP10619 480 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 SDHAP31040 664 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 IL10RAQ13651 578 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 OR2T6Q8NHC8 308 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 IFI44Q8TCB0 444 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 SLCO1B1Q9Y6L6 691 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 YLPM1P49750 1951 aaKnown RBP11.1□□□□□ -0.63
SHANK2-203ENST00000409161 A6NDN8 102 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 TLCD2A6NGC4 264 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 BCL6P41182 706 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 GALR1P47211 349 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 PJVKQ0ZLH3 352 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 SMIM21Q3B7S5 101 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 VWA1Q6PCB0 445 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 CTU1Q7Z7A3 348 aaKnown RBP11.1□□□□□ -0.63
SHANK2-203ENST00000409161 ZNF761Q86XN6 746 aaPredicted RBP11.1□□□□□ -0.63
SHANK2-203ENST00000409161 RAG2P55895 527 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 TMEM88Q6PEY1 159 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 HGDQ93099 445 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 SLC5A6Q9Y289 635 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 LOC107986453A0A1B0GWG9 222 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 SCO1O75880 301 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 IL5P05113 134 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 LYSMD4Q5XG99 296 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 DRAM2Q6UX65 266 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 NTNG2Q96CW9 530 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 ZPBPQ9BS86 351 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 HDAC8Q9BY41 377 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 SLC35B3Q9H1N7 401 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 DOCK1Q14185 1865 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 ATAD5Q96QE3 1844 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 SELENOFO60613 162 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 PIGPP57054 158 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 GPR85P60893 370 aa11.1□□□□□ -0.63
SHANK2-203ENST00000409161 MRPS21P82921 87 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms