RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 DCBLD2Q96PD2 775 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 RBM24Q9BX46 236 aaKnown RBP7.48□□□□□ -1.21
SNX13-201ENST00000409076 JAM3Q9BX67 310 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 CHST11Q9NPF2 352 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 EHFQ9NZC4 300 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 ASH2LQ9UBL3 628 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 OR52A1Q9UKL2 312 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 TRANK1O15050 2925 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 IGKV1D-43A0A0B4J1Z2 117 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 LOC100289279A0A1B0GTE1 492 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 EFCAB7A8K855 629 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 TAS2R19P59542 299 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 LPAL2Q16609 132 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 CLEC12BQ2HXU8 276 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 MANEAQ5SRI9 462 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 ATPAF1Q5TC12 328 aaPredicted RBP7.48□□□□□ -1.21
SNX13-201ENST00000409076 BIVMQ86UB2 503 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 NAA40Q86UY6 237 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 OR4K15Q8NH41 348 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 STOML3Q8TAV4 291 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 VSTM2LQ96N03 204 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 HDHD3Q9BSH5 251 aaPredicted RBP7.48□□□□□ -1.21
SNX13-201ENST00000409076 SUCNR1Q9BXA5 334 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 ZNF700Q9H0M5 742 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 ESRP2Q9H6T0 727 aaKnown RBP7.48□□□□□ -1.21
SNX13-201ENST00000409076 WNT16Q9UBV4 365 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 SUSD2Q9UGT4 822 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 HHLA2Q9UM44 414 aa7.48□□□□□ -1.21
SNX13-201ENST00000409076 RIF1Q5UIP0 2472 aaKnown RBP7.47□□□□□ -1.21
SNX13-201ENST00000409076 PLSCR5A0PG75 271 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 H7C417 338 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 UPK3AO75631 287 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 PNMTP11086 282 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 PNLIPP16233 465 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 KLK2P20151 261 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 RORAP35398 523 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 RBM34P42696 430 aaKnown RBP7.47□□□□□ -1.21
SNX13-201ENST00000409076 GLO1Q04760 184 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 SERTAD2Q14140 314 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 SLC17A1Q14916 467 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 SPIN3Q5JUX0 258 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 LINC01590Q5TEZ4 76 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 PRR18Q8N4B5 295 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 OR1S1Q8NH92 325 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 SCARF2Q96GP6 870 aaPredicted RBP7.47□□□□□ -1.21
SNX13-201ENST00000409076 C12orf57Q99622 126 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 SARGQ9BW04 601 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 CNTD2Q9H8S5 307 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 C12orf10Q9HB07 376 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 MTFP1Q9UDX5 166 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 KLK13Q9UKR3 277 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 VSIG4Q9Y279 399 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 PCNX1Q96RV3 2341 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 TRBV23-1A0A0A0MS06 115 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 G3V3Q6 166 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 TRIM77I1YAP6 450 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 RER1O15258 196 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 SOCS1O15524 211 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 XRCC3O43542 346 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 FOXS1O43638 330 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 OR2T1O43869 369 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 LYPD3O95274 346 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 NAGAP17050 411 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 GLRA1P23415 457 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 ACTBP60709 375 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 ACTG1P63261 375 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 BDH1Q02338 343 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 ACY1Q03154 408 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 EGR4Q05215 589 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 RIN1Q13671 783 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 SNTB1Q13884 538 aaKnown RBP7.47□□□□□ -1.21
SNX13-201ENST00000409076 PTCRAQ6ISU1 281 aaPredicted RBP7.47□□□□□ -1.21
SNX13-201ENST00000409076 MRGPREQ86SM8 312 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 ZNF679Q8IYX0 411 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 SYS1Q8N2H4 156 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 BVESQ8NE79 360 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 TSTD1Q8NFU3 115 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 OR5T1Q8NG75 326 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 STACQ99469 402 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 PHB2Q99623 299 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 CUTCQ9NTM9 273 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 J3QRE1 110 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 C1QL1O75973 258 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 OR13C7P0DN81 318 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 GABRG2P18507 467 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 KIR2DL1P43626 348 aaPredicted RBP7.47□□□□□ -1.21
SNX13-201ENST00000409076 FAM76BQ5HYJ3 339 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 C1orf140Q5VVS0 124 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 TTC9Q92623 222 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 SLC5A6Q9Y289 635 aa7.47□□□□□ -1.21
SNX13-201ENST00000409076 PI4KAP42356 2102 aa7.46□□□□□ -1.21
SNX13-201ENST00000409076 NAP1L6A6NFF2 107 aa7.46□□□□□ -1.21
SNX13-201ENST00000409076 TMEM212A6NML5 194 aa7.46□□□□□ -1.21
SNX13-201ENST00000409076 NSA2O95478 260 aaKnown RBP7.46□□□□□ -1.21
SNX13-201ENST00000409076 TXNDC12O95881 172 aa7.46□□□□□ -1.21
SNX13-201ENST00000409076 TMEM225BP0DP42 221 aa7.46□□□□□ -1.21
SNX13-201ENST00000409076 GAAP10253 952 aa7.46□□□□□ -1.21
SNX13-201ENST00000409076 BCKDHBP21953 392 aa7.46□□□□□ -1.21
SNX13-201ENST00000409076 FBLP22087 321 aaKnown RBP7.46□□□□□ -1.21
SNX13-201ENST00000409076 RFC3P40938 356 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms