RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 SLC25A28Q96A46 364 aa21.78■■□□□ 1.08
DNMT3A-206ENST00000406659 PHF21AQ96BD5 680 aa21.78■■□□□ 1.08
DNMT3A-206ENST00000406659 SLC17A5Q9NRA2 495 aa21.78■■□□□ 1.08
DNMT3A-206ENST00000406659 CGGBP1Q9UFW8 167 aaPredicted RBP21.78■■□□□ 1.08
DNMT3A-206ENST00000406659 SPAARA0A1B0GVQ0 90 aa21.77■■□□□ 1.08
DNMT3A-206ENST00000406659 ZNF716A6NP11 495 aa21.77■■□□□ 1.08
DNMT3A-206ENST00000406659 ACOT7O00154 380 aa21.77■■□□□ 1.08
DNMT3A-206ENST00000406659 ECDO95905 644 aaPredicted RBP21.77■■□□□ 1.08
DNMT3A-206ENST00000406659 RFC3P40938 356 aa21.77■■□□□ 1.08
DNMT3A-206ENST00000406659 EFNB2P52799 333 aa21.77■■□□□ 1.08
DNMT3A-206ENST00000406659 AP3S2P59780 193 aa21.77■■□□□ 1.08
DNMT3A-206ENST00000406659 ENDOGQ14249 297 aaKnown RBP21.77■■□□□ 1.08
DNMT3A-206ENST00000406659 COMMD2Q86X83 199 aa21.77■■□□□ 1.08
DNMT3A-206ENST00000406659 NKAIN3Q8N8D7 197 aa21.77■■□□□ 1.08
DNMT3A-206ENST00000406659 SLC7A6Q92536 515 aa21.77■■□□□ 1.08
DNMT3A-206ENST00000406659 NABP1Q96AH0 204 aa21.77■■□□□ 1.08
DNMT3A-206ENST00000406659 FOXRED1Q96CU9 486 aaPredicted RBP21.77■■□□□ 1.08
DNMT3A-206ENST00000406659 SLC2A1P11166 492 aa21.76■■□□□ 1.07
DNMT3A-206ENST00000406659 CD82P27701 267 aa21.76■■□□□ 1.07
DNMT3A-206ENST00000406659 GALK2Q01415 458 aa21.76■■□□□ 1.07
DNMT3A-206ENST00000406659 ATAD3CQ5T2N8 411 aa21.76■■□□□ 1.07
DNMT3A-206ENST00000406659 ABLIM2Q6H8Q1 611 aa21.76■■□□□ 1.07
DNMT3A-206ENST00000406659 AAED1Q7RTV5 226 aa21.76■■□□□ 1.07
DNMT3A-206ENST00000406659 LRRC18Q8N456 261 aa21.76■■□□□ 1.07
DNMT3A-206ENST00000406659 OR8B12Q8NGG6 310 aa21.76■■□□□ 1.07
DNMT3A-206ENST00000406659 OR1J2Q8NGS2 313 aa21.76■■□□□ 1.07
DNMT3A-206ENST00000406659 CPNE4Q96A23 557 aaPredicted RBP21.76■■□□□ 1.07
DNMT3A-206ENST00000406659 NKX3-1Q99801 234 aaPredicted RBP21.76■■□□□ 1.07
DNMT3A-206ENST00000406659 CACNG6Q9BXT2 260 aa21.76■■□□□ 1.07
DNMT3A-206ENST00000406659 ZNF703Q9H7S9 590 aaPredicted RBP21.76■■□□□ 1.07
DNMT3A-206ENST00000406659 A0A1B0GTI1 187 aa21.76■■□□□ 1.07
DNMT3A-206ENST00000406659 TMEM272A0A1B0GTI8 110 aa21.76■■□□□ 1.07
DNMT3A-206ENST00000406659 CTAG2O75638 210 aa21.76■■□□□ 1.07
DNMT3A-206ENST00000406659 MT-ND4P03905 459 aa21.76■■□□□ 1.07
DNMT3A-206ENST00000406659 HPNP05981 417 aa21.76■■□□□ 1.07
DNMT3A-206ENST00000406659 GSTT2BP0CG30 244 aa21.76■■□□□ 1.07
DNMT3A-206ENST00000406659 CLDN15P56746 228 aa21.76■■□□□ 1.07
DNMT3A-206ENST00000406659 OR5D14Q8NGL3 314 aa21.76■■□□□ 1.07
DNMT3A-206ENST00000406659 KCNK15Q9H427 330 aa21.76■■□□□ 1.07
DNMT3A-206ENST00000406659 COPZ2Q9P299 210 aa21.76■■□□□ 1.07
DNMT3A-206ENST00000406659 NUBP2Q9Y5Y2 271 aa21.76■■□□□ 1.07
DNMT3A-206ENST00000406659 CNTRLQ7Z7A1 2325 aa21.75■■□□□ 1.07
DNMT3A-206ENST00000406659 ARSBP15848 533 aa21.75■■□□□ 1.07
DNMT3A-206ENST00000406659 ZNF20P17024 532 aa21.75■■□□□ 1.07
DNMT3A-206ENST00000406659 GIFP27352 417 aa21.75■■□□□ 1.07
DNMT3A-206ENST00000406659 BDKRB2P30411 391 aa21.75■■□□□ 1.07
DNMT3A-206ENST00000406659 RAB25P57735 213 aa21.75■■□□□ 1.07
DNMT3A-206ENST00000406659 FAM57BQ71RH2 274 aa21.75■■□□□ 1.07
DNMT3A-206ENST00000406659 ZBTB8BQ8NAP8 495 aaPredicted RBP21.75■■□□□ 1.07
DNMT3A-206ENST00000406659 OR1M1Q8NGA1 313 aa21.75■■□□□ 1.07
DNMT3A-206ENST00000406659 ADAT3Q96EY9 351 aaPredicted RBP21.75■■□□□ 1.07
DNMT3A-206ENST00000406659 ST6GAL2Q96JF0 529 aa21.75■■□□□ 1.07
DNMT3A-206ENST00000406659 MRPL15Q9P015 296 aaKnown RBP21.75■■□□□ 1.07
DNMT3A-206ENST00000406659 GGT3PA6NGU5 568 aa21.74■■□□□ 1.07
DNMT3A-206ENST00000406659 A8MV72 311 aaPredicted RBP21.74■■□□□ 1.07
DNMT3A-206ENST00000406659 TCRBP04435 133 aa21.74■■□□□ 1.07
DNMT3A-206ENST00000406659 CTSSP25774 331 aa21.74■■□□□ 1.07
DNMT3A-206ENST00000406659 MRPS34P82930 218 aaKnown RBP21.74■■□□□ 1.07
DNMT3A-206ENST00000406659 PLGLB1Q02325 96 aa21.74■■□□□ 1.07
DNMT3A-206ENST00000406659 C1orf100Q5SVJ3 147 aa21.74■■□□□ 1.07
DNMT3A-206ENST00000406659 ABHD12BQ7Z5M8 362 aaPredicted RBP21.74■■□□□ 1.07
DNMT3A-206ENST00000406659 GPR137CQ8N3F9 429 aa21.74■■□□□ 1.07
DNMT3A-206ENST00000406659 SORCS2Q96PQ0 1159 aa21.74■■□□□ 1.07
DNMT3A-206ENST00000406659 TTTY12Q9BZ98 90 aa21.74■■□□□ 1.07
DNMT3A-206ENST00000406659 ATG5Q9H1Y0 275 aa21.74■■□□□ 1.07
DNMT3A-206ENST00000406659 RBMX2Q9Y388 322 aaKnown RBP21.74■■□□□ 1.07
DNMT3A-206ENST00000406659 FAM166BA8MTA8 275 aa21.74■■□□□ 1.07
DNMT3A-206ENST00000406659 CYTIPO60759 359 aa21.74■■□□□ 1.07
DNMT3A-206ENST00000406659 DHFRP00374 187 aa21.74■■□□□ 1.07
DNMT3A-206ENST00000406659 PTHLHP12272 177 aa21.74■■□□□ 1.07
DNMT3A-206ENST00000406659 HIST1H3AP68431 136 aa21.74■■□□□ 1.07
DNMT3A-206ENST00000406659 HIST2H3PS2Q5TEC6 136 aa21.74■■□□□ 1.07
DNMT3A-206ENST00000406659 HIST2H3AQ71DI3 136 aa21.74■■□□□ 1.07
DNMT3A-206ENST00000406659 GALNT16Q8N428 558 aa21.74■■□□□ 1.07
DNMT3A-206ENST00000406659 TMEM138Q9NPI0 162 aa21.74■■□□□ 1.07
DNMT3A-206ENST00000406659 GPR84Q9NQS5 396 aa21.74■■□□□ 1.07
DNMT3A-206ENST00000406659 KLK11Q9UBX7 282 aa21.74■■□□□ 1.07
DNMT3A-206ENST00000406659 SLC5A6Q9Y289 635 aa21.74■■□□□ 1.07
DNMT3A-206ENST00000406659 LOC390937A0A1W2PQ73 354 aa21.73■■□□□ 1.07
DNMT3A-206ENST00000406659 OR5H15A6NDH6 313 aa21.73■■□□□ 1.07
DNMT3A-206ENST00000406659 TGIF1Q15583 401 aa21.73■■□□□ 1.07
DNMT3A-206ENST00000406659 ATP1A1-AS1Q5TC04 95 aa21.73■■□□□ 1.07
DNMT3A-206ENST00000406659 FAM27BQ5VT28 67 aa21.73■■□□□ 1.07
DNMT3A-206ENST00000406659 ZNF813Q6ZN06 617 aa21.73■■□□□ 1.07
DNMT3A-206ENST00000406659 DTX1Q86Y01 620 aa21.73■■□□□ 1.07
DNMT3A-206ENST00000406659 ZNF837Q96EG3 531 aaPredicted RBP21.73■■□□□ 1.07
DNMT3A-206ENST00000406659 PGAM5Q96HS1 289 aa21.73■■□□□ 1.07
DNMT3A-206ENST00000406659 ZNF845Q96IR2 970 aaPredicted RBP21.73■■□□□ 1.07
DNMT3A-206ENST00000406659 NUDT15Q9NV35 164 aa21.73■■□□□ 1.07
DNMT3A-206ENST00000406659 KLF13Q9Y2Y9 288 aaPredicted RBP21.73■■□□□ 1.07
DNMT3A-206ENST00000406659 ZNF318Q5VUA4 2279 aa21.72■■□□□ 1.07
DNMT3A-206ENST00000406659 TRAV6A0A075B6T7 132 aa21.72■■□□□ 1.07
DNMT3A-206ENST00000406659 TRAV18A0A075B6X5 111 aa21.72■■□□□ 1.07
DNMT3A-206ENST00000406659 A6NL46 340 aa21.72■■□□□ 1.07
DNMT3A-206ENST00000406659 SP1P08047 785 aa21.72■■□□□ 1.07
DNMT3A-206ENST00000406659 CELA3AP09093 270 aa21.72■■□□□ 1.07
DNMT3A-206ENST00000406659 RAB3AP20336 220 aa21.72■■□□□ 1.07
DNMT3A-206ENST00000406659 NTF4P34130 210 aa21.72■■□□□ 1.07
DNMT3A-206ENST00000406659 CCR6P51684 374 aa21.72■■□□□ 1.07
DNMT3A-206ENST00000406659 CAPZA1P52907 286 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms