RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 ANKHQ9HCJ1 492 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 FGF22Q9HCT0 170 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 FAIMQ9NVQ4 179 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 FBXL12Q9NXK8 326 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 ZNF282Q9UDV7 671 aaPredicted RBP5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 BTNL2Q9UIR0 455 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 ZDBF2Q9HCK1 2354 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 ARID1AO14497 2285 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 HSPB2A8KAH6 182 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 SHISA8B8ZZ34 492 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 SLC31A2O15432 143 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 NUPL2O15504 423 aaKnown RBP5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 NCR1O76036 304 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 SCGNO76038 276 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 AP2A2O94973 939 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 WNT11O96014 354 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 MBPP02686 304 aaPredicted RBP5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 SEMG1P04279 462 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 ITGB7P26010 798 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 TPTEP56180 551 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 CLDN15P56746 228 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 RELAQ04206 551 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 SELENBP1Q13228 472 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 HSPB2Q16082 182 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 BSXQ3C1V8 233 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 OTPQ5XKR4 325 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 FAHD1Q6P587 224 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 TRIM40Q6P9F5 258 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 ABHD13Q7L211 337 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 NAXDQ8IW45 347 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 PUSL1Q8N0Z8 303 aaKnown RBP5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 OR10A7Q8NGE5 316 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 OR52N2Q8NGI0 321 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 OR4D5Q8NGN0 318 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 OR9Q1Q8NGQ5 310 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 DYNC2LI1Q8TCX1 351 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 MRAPQ8TCY5 172 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 EFCAB11Q9BUY7 163 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 SPRTNQ9H040 489 aaPredicted RBP5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 GLIPR2Q9H4G4 154 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 Q9N2K0 584 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 FAM30AQ9NZY2 134 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 EPHA6Q9UF33 1036 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 POLDIP2Q9Y2S7 368 aa5.51□□□□□ -1.53
TRAPPC13-202ENST00000399438 LRRK1Q38SD2 2015 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 HMGN4O00479 90 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 RNASET2O00584 256 aaKnown RBP5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 SLC16A5O15375 505 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 SYNGR3O43761 229 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 CHST1O43916 411 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 PRKYO43930 277 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 KIAA0513O60268 411 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 RGS11O94810 467 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 GABARAPO95166 117 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 RCBTB2O95199 551 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 SLC2A10O95528 541 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 HMGN2P05204 90 aaKnown RBP5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 GKN3PP0CG01 181 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 GGT2P36268 569 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 NR4A2P43354 598 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 FGF8P55075 233 aaPredicted RBP5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 RAG2P55895 527 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 STXBP1P61764 594 aaKnown RBP5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 BTN3A2P78410 334 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 FZD5Q13467 585 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 C1orf61Q13536 156 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 MICAQ29983 383 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 SLC36A2Q495M3 483 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 DEFB134Q4QY38 66 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 DDI2Q5TDH0 399 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 TMEM200BQ69YZ2 307 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 CD163Q86VB7 1156 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 LDLRAD3Q86YD5 345 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 METTL4Q8N3J2 472 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 MFSD4AQ8N468 514 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 LHFPL5Q8TAF8 219 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 TM9SF4Q92544 642 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 CDS1Q92903 461 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 YIPF6Q96EC8 236 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 SLIRPQ9GZT3 109 aaKnown RBP5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 MTCH2Q9Y6C9 303 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 SAGE2PA6NJ88 616 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 CLDN34H7C241 214 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 GOSR2O14653 212 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 MAGEB4O15481 346 aaPredicted RBP5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 LDB3O75112 727 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 CELA2BP08218 269 aaPredicted RBP5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 NBEAP1P0C6P0 100 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 SP9P0CG40 484 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 JUNBP17275 347 aaPredicted RBP5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 DCDC1P59894 354 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 CRYZQ08257 329 aaKnown RBP5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 ZP4Q12836 540 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 UBXN2BQ14CS0 331 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 CST6Q15828 149 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 C2orf68Q2NKX9 166 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 PAN3Q58A45 887 aaKnown RBP5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 RNASE12Q5GAN4 147 aaKnown RBP5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 AGBL4Q5VU57 503 aa5.5□□□□□ -1.53
TRAPPC13-202ENST00000399438 ACSM5Q6NUN0 579 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms