RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 IL9P15248 144 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 GABRB1P18505 474 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 EIF3IQ13347 325 aaKnown RBP12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 C11orf91Q3C1V1 193 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 OR5H6Q8NGV6 325 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 ZNF285Q96NJ3 590 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 ARPC5LQ9BPX5 153 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 ZNF649Q9BS31 505 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 ADGRL4Q9HBW9 690 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 IGHV3-15A0A0B4J1V0 119 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 CEBPZOSA8MTT3 80 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 LINC01387J3KSC0 135 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 FADS1O60427 444 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 MPLP40238 635 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 OR10K2Q6IF99 312 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 FAM199XQ6PEV8 388 aaPredicted RBP12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 OR10K1Q8NGX5 313 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 OR51F2Q8NH61 342 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 CMTM3Q96MX0 182 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 PLEKHA3Q9HB20 300 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 RP1P56715 2156 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 TET1Q8NFU7 2136 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 A0A0B4J2A0 478 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 TBPP20226 339 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 GALNSP34059 522 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 PEA15Q15121 130 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 PAN3Q58A45 887 aaKnown RBP12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 LANCL2Q9NS86 450 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 GHRLQ9UBU3 117 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 SHPKQ9UHJ6 478 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 LRP12Q9Y561 859 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 ARID1AO14497 2285 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 B8ZZF3 427 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 TNFSF11O14788 317 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 PHF1O43189 567 aaPredicted RBP12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 NRASP01111 189 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 ALOX5APP20292 161 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 MMP15P51511 669 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 ZNF121P58317 390 aaPredicted RBP12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 DEGS2Q6QHC5 323 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 ZNF610Q8N9Z0 462 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 SEH1LQ96EE3 360 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 HRH4Q9H3N8 390 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 SLC52A3Q9NQ40 469 aa12.82□□□□□ -0.36
PCDHGA11-201ENST00000398587 OR6C6A6NF89 314 aa12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 SHISA7A6NL88 538 aa12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 TOR1AO14656 332 aa12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 ZFPL1O95159 310 aa12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 ERGP11308 486 aa12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 ELFN2Q5R3F8 820 aa12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 LAIR1Q6GTX8 287 aa12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 EMG1Q92979 244 aaKnown RBP12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 C4orf45Q96LM5 186 aa12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 KCNJ15Q99712 375 aa12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 FOXJ3Q9UPW0 622 aa12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 PRELID1Q9Y255 219 aa12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 XRCC3O43542 346 aa12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 PEBP1P30086 187 aaKnown RBP12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 ZNF136P52737 540 aa12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 TIGD3Q6B0B8 471 aa12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 ZNF529Q6P280 563 aa12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 LSMEM1Q8N8F7 131 aa12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 SLC38A9Q8NBW4 561 aa12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 NUBPLQ8TB37 319 aa12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 CPNE4Q96A23 557 aaPredicted RBP12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 UPRTQ96BW1 309 aa12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 RTL8AQ9BWD3 113 aa12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 BARHL1Q9BZE3 327 aa12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 FAM212BQ9NTI7 297 aaPredicted RBP12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 ATF1P18846 271 aa12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 CDKN2AP42771 156 aaKnown RBP12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 SSBP1Q04837 148 aaKnown RBP12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 D2HGDHQ8N465 521 aa12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 NUDCD2Q8WVJ2 157 aa12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 P4HTMQ9NXG6 502 aa12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 MN1Q10571 1320 aaPredicted RBP12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 PRICKLE3O43900 615 aaPredicted RBP12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 MED6O75586 246 aa12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 FUT7Q11130 342 aa12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 KRBOX4Q5JUW0 171 aa12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 LHFPL2Q6ZUX7 228 aa12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 PLPP5Q8NEB5 264 aa12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 AUNIPQ9H7T9 357 aa12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 CES1P1Q9UKY3 287 aa12.81□□□□□ -0.36
PCDHGA11-201ENST00000398587 TMEM265A0A087WTH1 108 aa12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 SHISA8B8ZZ34 492 aa12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 IFNA17P01571 189 aa12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 CTXN2P0C2S0 81 aa12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 BCKDHBP21953 392 aa12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 PWWP2BQ6NUJ5 590 aa12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 WDR74Q6RFH5 385 aaPredicted RBP12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 TFAP2EQ6VUC0 442 aa12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 OR56B2PQ8NGI1 322 aa12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 OR6K3Q8NGY3 331 aa12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 HAO2Q9NYQ3 351 aa12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 FBXL4Q9UKA2 621 aa12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 POLDIP2Q9Y2S7 368 aa12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 CCDC163A0A0D9SF12 145 aa12.8□□□□□ -0.36
PCDHGA11-201ENST00000398587 PMS2P1A4D2B8 440 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms