RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 OR6C68A6NDL8 312 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 SERPINA7P05543 415 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 FGF2P09038 288 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 CEBPBP17676 345 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 PAX6P26367 422 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 PPICP45877 212 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 HSD11B2P80365 405 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 ZNF750Q32MQ0 723 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 LINC00469Q8N7U9 141 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 NKAIN3Q8N8D7 197 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 OR2G2Q8NGZ5 317 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 INTS12Q96CB8 462 aaKnown RBP4.93□□□□□ -1.62
PTPRD-205ENST00000397611 TXN2Q99757 166 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 FAM103A1Q9BTL3 118 aaKnown RBP4.93□□□□□ -1.62
PTPRD-205ENST00000397611 HCFC1R1Q9NWW0 138 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 ACAA2P42765 397 aaKnown RBP4.93□□□□□ -1.62
PTPRD-205ENST00000397611 ZNF41P51814 821 aaPredicted RBP4.93□□□□□ -1.62
PTPRD-205ENST00000397611 EMP2P54851 167 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 MLF1P58340 268 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 RNF4P78317 190 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 HAGHQ16775 308 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 CST9LP1Q5W188 147 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 WBP2NLQ6ICG8 309 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 FAM24BQ8N5W8 94 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 C15orf54Q8N8G6 183 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 ZNF610Q8N9Z0 462 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 PNPLA2Q96AD5 504 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 RHOVQ96L33 236 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 EDEM2Q9BV94 578 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 OR8D2Q9GZM6 311 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 SLCO1C1Q9NYB5 712 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 PLXNA2O75051 1894 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 MFSD2BA6NFX1 497 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 NUDT21O43809 227 aaKnown RBP4.93□□□□□ -1.62
PTPRD-205ENST00000397611 BLKP51451 505 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 MMP16P51512 607 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 PSG6Q00889 435 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 SLC35D2Q76EJ3 337 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 TIPARPQ7Z3E1 657 aaKnown RBP4.93□□□□□ -1.62
PTPRD-205ENST00000397611 CPNE4Q96A23 557 aaPredicted RBP4.93□□□□□ -1.62
PTPRD-205ENST00000397611 LRRC3BQ96PB8 259 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 KCNE5Q9UJ90 142 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 GDF2Q9UK05 429 aaPredicted RBP4.93□□□□□ -1.62
PTPRD-205ENST00000397611 HIDE1A8MVS5 230 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 CD8AP01732 235 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 GUCA2AQ02747 115 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 SGCAQ16586 387 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 AMER3Q8N944 861 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 OR4C16Q8NGL9 310 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 OR1J2Q8NGS2 313 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 RXFP4Q8TDU9 374 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 PIPOXQ9P0Z9 390 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 SLC7A11Q9UPY5 501 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 ANAPC1Q9H1A4 1944 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 SERINC4A6NH21 518 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 LDB3O75112 727 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 F12P00748 615 aaPredicted RBP4.93□□□□□ -1.62
PTPRD-205ENST00000397611 CHRM2P08172 466 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 PLAURQ03405 335 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 HNF4GQ14541 408 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 C2orf27AQ580R0 203 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 FAM109BQ6ICB4 259 aaPredicted RBP4.93□□□□□ -1.62
PTPRD-205ENST00000397611 SSX7Q7RTT5 188 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 GRASPQ7Z6J2 395 aaPredicted RBP4.93□□□□□ -1.62
PTPRD-205ENST00000397611 FJX1Q86VR8 437 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 OR9K2Q8NGE7 335 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 ZNF75AQ96N20 296 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 OR1F2PQ96R84 312 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 SYT3Q9BQG1 590 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 UBQLN4Q9NRR5 601 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 MMP24Q9Y5R2 645 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 TRBV6-7A0A0A0MS04 114 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 A0A0J9YY10 115 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 A0A1B0GV90 55 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 A0A1W2PQD3 144 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 G3V3Q6 166 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 F13BP05160 661 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 FGF7P21781 194 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 RUNX2Q13950 521 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 EXOSC7Q15024 291 aaKnown RBP4.93□□□□□ -1.62
PTPRD-205ENST00000397611 SHEQ5VZ18 495 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 POC1BQ8TC44 478 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 GPX8Q8TED1 209 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 FGF13Q92913 245 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 SGK3Q96BR1 496 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 ARSGQ96EG1 525 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 MMP25Q9NPA2 562 aa4.93□□□□□ -1.62
PTPRD-205ENST00000397611 CGGBP1Q9UFW8 167 aaPredicted RBP4.93□□□□□ -1.62
PTPRD-205ENST00000397611 LILRA5A6NI73 299 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 TMEM150CB9EJG8 249 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 HSBP1L1C9JCN9 74 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 FGF17O60258 216 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 DIRAS3O95661 229 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 NAGAP17050 411 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 EMDP50402 254 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 RAB11AP62491 216 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 MRPS21P82921 87 aaKnown RBP4.92□□□□□ -1.62
PTPRD-205ENST00000397611 MFGE8Q08431 387 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-205ENST00000397611 PMPCAQ10713 525 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 FHL1Q13642 323 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms