RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 MBOAT2Q6ZWT7 520 aa4.06□□□□□ -1.76
GABPB1-204ENST00000396464 SMIM15Q7Z3B0 74 aa4.06□□□□□ -1.76
GABPB1-204ENST00000396464 HORMAD1Q86X24 394 aa4.06□□□□□ -1.76
GABPB1-204ENST00000396464 ACBD4Q8NC06 268 aa4.06□□□□□ -1.76
GABPB1-204ENST00000396464 OR2T11Q8NH01 316 aa4.06□□□□□ -1.76
GABPB1-204ENST00000396464 LNX1Q8TBB1 728 aaPredicted RBP4.06□□□□□ -1.76
GABPB1-204ENST00000396464 SYNPRQ8TBG9 265 aa4.06□□□□□ -1.76
GABPB1-204ENST00000396464 DOK4Q8TEW6 326 aa4.06□□□□□ -1.76
GABPB1-204ENST00000396464 FAM172AQ8WUF8 416 aa4.06□□□□□ -1.76
GABPB1-204ENST00000396464 PPWD1Q96BP3 646 aaKnown RBP4.06□□□□□ -1.76
GABPB1-204ENST00000396464 CEP19Q96LK0 163 aa4.06□□□□□ -1.76
GABPB1-204ENST00000396464 ZNF385AQ96PM9 386 aaKnown RBP4.06□□□□□ -1.76
GABPB1-204ENST00000396464 HBEGFQ99075 208 aa4.06□□□□□ -1.76
GABPB1-204ENST00000396464 TSNAXQ99598 290 aaKnown RBP4.06□□□□□ -1.76
GABPB1-204ENST00000396464 NUDT9Q9BW91 350 aa4.06□□□□□ -1.76
GABPB1-204ENST00000396464 CALN1Q9BXU9 219 aa4.06□□□□□ -1.76
GABPB1-204ENST00000396464 ARL6Q9H0F7 186 aa4.06□□□□□ -1.76
GABPB1-204ENST00000396464 TMEM27Q9HBJ8 222 aa4.06□□□□□ -1.76
GABPB1-204ENST00000396464 IL1RAPQ9NPH3 570 aa4.06□□□□□ -1.76
GABPB1-204ENST00000396464 UGGT2Q9NYU1 1516 aa4.06□□□□□ -1.76
GABPB1-204ENST00000396464 CKAP5Q14008 2032 aa4.06□□□□□ -1.76
GABPB1-204ENST00000396464 EVPLQ92817 2033 aa4.06□□□□□ -1.76
GABPB1-204ENST00000396464 CFAP43Q8NDM7 1665 aa4.06□□□□□ -1.76
GABPB1-204ENST00000396464 COL22A1Q8NFW1 1626 aaPredicted RBP4.06□□□□□ -1.76
GABPB1-204ENST00000396464 GNG14A0A1W2PPG7 69 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 PRR23AA6NEV1 266 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 SRRM3A6NNA2 597 aaPredicted RBP4.05□□□□□ -1.76
GABPB1-204ENST00000396464 GABRPO00591 440 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 SOCS2O14508 198 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 BIRC5O15392 142 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 PHF1O43189 567 aaPredicted RBP4.05□□□□□ -1.76
GABPB1-204ENST00000396464 RAD51CO43502 376 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 ARG1P05089 322 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 ISG15P05161 165 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 OR8U9P0C7N5 309 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 CALM1P0DP23 149 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 CALM2P0DP24 149 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 CALM3P0DP25 149 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 IDH3GP51553 393 aaPredicted RBP4.05□□□□□ -1.76
GABPB1-204ENST00000396464 MNAT1P51948 309 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 RAB8AP61006 207 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 RANP62826 216 aaKnown RBP4.05□□□□□ -1.76
GABPB1-204ENST00000396464 FASTKQ14296 549 aaKnown RBP4.05□□□□□ -1.76
GABPB1-204ENST00000396464 ARL6IP1Q15041 203 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 TRAM1Q15629 374 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 MLF2Q15773 248 aaPredicted RBP4.05□□□□□ -1.76
GABPB1-204ENST00000396464 TMEM176BQ3YBM2 270 aaPredicted RBP4.05□□□□□ -1.76
GABPB1-204ENST00000396464 ZNF658BQ4V348 819 aaPredicted RBP4.05□□□□□ -1.76
GABPB1-204ENST00000396464 TECRLQ5HYJ1 363 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 SPIN3Q5JUX0 258 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 TPTE2P1Q5T6R2 138 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 C10orf25Q5T742 122 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 FAM219BQ5XKK7 198 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 SAXO2Q658L1 398 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 NT5DC3Q86UY8 548 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 PLA2G4DQ86XP0 818 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 ATPAF2Q8N5M1 289 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 OR8U1Q8NH10 309 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 ADAMTS16Q8TE57 1224 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 TMED6Q8WW62 240 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 NELFBQ8WX92 580 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 PYDC1Q8WXC3 89 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 SMIM19Q96E16 107 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 KCTD7Q96MP8 289 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 TMEM56Q96MV1 263 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 RARRES2Q99969 163 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 UGT2B28Q9BY64 529 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 ULBP1Q9BZM6 244 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 UBXN6Q9BZV1 441 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 ELL3Q9HB65 397 aaPredicted RBP4.05□□□□□ -1.76
GABPB1-204ENST00000396464 MLXQ9UH92 298 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 ZNF580Q9UK33 172 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 ARHGAP35Q9NRY4 1499 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 SMCHD1A6NHR9 2005 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 KIAA0232Q92628 1395 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 TNRQ92752 1358 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 ARHGEF11O15085 1522 aa4.05□□□□□ -1.76
GABPB1-204ENST00000396464 CCDC18Q5T9S5 1454 aa4.04□□□□□ -1.76
GABPB1-204ENST00000396464 FYCO1Q9BQS8 1478 aa4.04□□□□□ -1.76
GABPB1-204ENST00000396464 ZNF816-ZNF321PA0A0X1KG74 233 aa4.04□□□□□ -1.76
GABPB1-204ENST00000396464 ZNF705EA8MWA4 302 aaPredicted RBP4.04□□□□□ -1.76
GABPB1-204ENST00000396464 NPIPB9F8W1W9 429 aa4.04□□□□□ -1.76
GABPB1-204ENST00000396464 CXCR6O00574 342 aa4.04□□□□□ -1.76
GABPB1-204ENST00000396464 PFDN6O15212 129 aa4.04□□□□□ -1.76
GABPB1-204ENST00000396464 SLC16A7O60669 478 aa4.04□□□□□ -1.76
GABPB1-204ENST00000396464 ICOSLGO75144 302 aa4.04□□□□□ -1.76
GABPB1-204ENST00000396464 PAK4O96013 591 aaPredicted RBP4.04□□□□□ -1.76
GABPB1-204ENST00000396464 IGHV3-9P01782 118 aa4.04□□□□□ -1.76
GABPB1-204ENST00000396464 CELP19835 753 aa4.04□□□□□ -1.76
GABPB1-204ENST00000396464 FUT3P21217 361 aa4.04□□□□□ -1.76
GABPB1-204ENST00000396464 PSMA1P25786 263 aaKnown RBP4.04□□□□□ -1.76
GABPB1-204ENST00000396464 GLP1RP43220 463 aa4.04□□□□□ -1.76
GABPB1-204ENST00000396464 GPM6AP51674 278 aa4.04□□□□□ -1.76
GABPB1-204ENST00000396464 UBE2E1P51965 193 aa4.04□□□□□ -1.76
GABPB1-204ENST00000396464 AP2S1P53680 142 aaPredicted RBP4.04□□□□□ -1.76
GABPB1-204ENST00000396464 SUB1P53999 127 aaKnown RBP eCLIP4.04□□□□□ -1.76
GABPB1-204ENST00000396464 MFAP2P55001 183 aa4.04□□□□□ -1.76
GABPB1-204ENST00000396464 BIDP55957 195 aa4.04□□□□□ -1.76
GABPB1-204ENST00000396464 OR4D2P58180 307 aa4.04□□□□□ -1.76
GABPB1-204ENST00000396464 TAS2R39P59534 338 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms