RNA–Protein interactions for RNA: ENST00000394943.7

LIMA1-202, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-202ENST00000394943 C6orf52Q5T4I8 152 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 FBXW10Q5XX13 1052 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 UNQ6126/PRO20091Q6UXV3 157 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 ZNF511Q8NB15 262 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 PLPPR2Q96GM1 343 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 TMEM80Q96HE8 168 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 CYSLTR2Q9NS75 346 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 LRP12Q9Y561 859 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 PCDHGB5Q9Y5G0 923 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 MED12Q93074 2177 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 CHD3Q12873 2000 aaKnown RBP6.02□□□□□ -1.45
LIMA1-202ENST00000394943 TRBV5-5A0A0J9YX44 114 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 CIB4A0PJX0 185 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 B9A039 149 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 H0YHG0 523 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 RER1O15258 196 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 KRT33AO76009 404 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 IGHV3-9P01782 118 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 CD3EP07766 207 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 CFHR2P36980 270 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 IL1RL1Q01638 556 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 RAB39AQ14964 217 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 MEP1BQ16820 701 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 ZIK1Q3SY52 487 aaPredicted RBP6.02□□□□□ -1.45
LIMA1-202ENST00000394943 DMKNQ6E0U4 476 aaPredicted RBP6.02□□□□□ -1.45
LIMA1-202ENST00000394943 KCTD18Q6PI47 426 aaPredicted RBP6.02□□□□□ -1.45
LIMA1-202ENST00000394943 CD200R1LQ6Q8B3 271 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 LYPD4Q6UWN0 246 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 CDH26Q8IXH8 852 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 Q8TCH9 128 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 NR1H4Q96RI1 486 aaPredicted RBP6.02□□□□□ -1.45
LIMA1-202ENST00000394943 MYOZ1Q9NP98 299 aaPredicted RBP6.02□□□□□ -1.45
LIMA1-202ENST00000394943 SNX5Q9Y5X3 404 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 MYO18BQ8IUG5 2567 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 HRNRQ86YZ3 2850 aaPredicted RBP6.02□□□□□ -1.45
LIMA1-202ENST00000394943 PLPP2O43688 288 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 ZNF823P16415 610 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 ANOS1P23352 680 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 CFL1P23528 166 aaKnown RBP6.02□□□□□ -1.45
LIMA1-202ENST00000394943 DOC2BQ14184 412 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 EIF2B1Q14232 305 aaKnown RBP6.02□□□□□ -1.45
LIMA1-202ENST00000394943 ARL9Q6T311 187 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 ZNF322Q6U7Q0 402 aaPredicted RBP6.02□□□□□ -1.45
LIMA1-202ENST00000394943 PLEKHG7Q6ZR37 379 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 BCDIN3DQ7Z5W3 292 aaKnown RBP6.02□□□□□ -1.45
LIMA1-202ENST00000394943 RFLNBQ8N5W9 214 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 ACBD7Q8N6N7 88 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 UBASH3BQ8TF42 649 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 SPTSSAQ969W0 71 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 ZMYND19Q96E35 227 aaPredicted RBP6.02□□□□□ -1.45
LIMA1-202ENST00000394943 PLEKHA8Q96JA3 519 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 LYZL4Q96KX0 146 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 CBLN4Q9NTU7 201 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 SLCO1C1Q9NYB5 712 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 MRPL15Q9P015 296 aaKnown RBP6.02□□□□□ -1.45
LIMA1-202ENST00000394943 SLC22A13Q9Y226 551 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 RHBDD3Q9Y3P4 386 aa6.02□□□□□ -1.45
LIMA1-202ENST00000394943 FBN2P35556 2912 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 PDZD2O15018 2839 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 UTS2BQ765I0 119 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 PRSS35Q8N3Z0 413 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 GALNT4Q8N4A0 578 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 CNIH3Q8TBE1 160 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 MRPL48Q96GC5 212 aaKnown RBP6.01□□□□□ -1.45
LIMA1-202ENST00000394943 PGLYRP3Q96LB9 341 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 POFUT1Q9H488 388 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 Q9H521 79 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 IMPAD1Q9NX62 359 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 ESPL1Q14674 2120 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 A0A096LNT2 108 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 A0A096LPE4 126 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 A0A1W2PPZ6 126 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 VWC2LB2RUY7 222 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 IFNL4K9M1U5 179 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 GIFP27352 417 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 POU1F1P28069 291 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 APLNRP35414 380 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 DDOSTP39656 456 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 CD200P41217 278 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 TPTEP56180 551 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 ZNF121P58317 390 aaPredicted RBP6.01□□□□□ -1.45
LIMA1-202ENST00000394943 MVKQ03426 396 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 SPOCK1Q08629 439 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 SGCAQ16586 387 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 CRIP3Q6Q6R5 217 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 DPY19L4Q7Z388 723 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 ALDH16A1Q8IZ83 802 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 Q8NFD4 153 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 OR2AJ1Q8NGZ0 328 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 TECTBQ96PL2 329 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 FOXC2Q99958 501 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 MED18Q9BUE0 208 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 DNAJC27Q9NZQ0 273 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 SF3B6Q9Y3B4 125 aaKnown RBP6.01□□□□□ -1.45
LIMA1-202ENST00000394943 OR4C45A6NMZ5 311 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 M0R129 80 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 TNFRSF13BO14836 293 aaPredicted RBP6.01□□□□□ -1.45
LIMA1-202ENST00000394943 GYPBP06028 91 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 ZNF12P17014 697 aa6.01□□□□□ -1.45
LIMA1-202ENST00000394943 FSTP19883 344 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms