RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 STK17BO94768 372 aa13.17□□□□□ -0.3
VPS9D1-201ENST00000389386 F10P00742 488 aa13.17□□□□□ -0.3
VPS9D1-201ENST00000389386 RPL4P36578 427 aaKnown RBP13.17□□□□□ -0.3
VPS9D1-201ENST00000389386 BCL6P41182 706 aa13.17□□□□□ -0.3
VPS9D1-201ENST00000389386 RPS10P46783 165 aaKnown RBP13.17□□□□□ -0.3
VPS9D1-201ENST00000389386 CLEC9AQ6UXN8 241 aa13.17□□□□□ -0.3
VPS9D1-201ENST00000389386 WFIKKN2Q8TEU8 576 aa13.17□□□□□ -0.3
VPS9D1-201ENST00000389386 SMARCD2Q92925 531 aa13.17□□□□□ -0.3
VPS9D1-201ENST00000389386 S100A13Q99584 98 aa13.17□□□□□ -0.3
VPS9D1-201ENST00000389386 WNT5BQ9H1J7 359 aa13.17□□□□□ -0.3
VPS9D1-201ENST00000389386 OR1A2Q9Y585 309 aa13.17□□□□□ -0.3
VPS9D1-201ENST00000389386 FLVCR1Q9Y5Y0 555 aa13.17□□□□□ -0.3
VPS9D1-201ENST00000389386 TMEM212A6NML5 194 aa13.16□□□□□ -0.3
VPS9D1-201ENST00000389386 TSTD3H0UI37 97 aa13.16□□□□□ -0.3
VPS9D1-201ENST00000389386 CSTBP04080 98 aaKnown RBP13.16□□□□□ -0.3
VPS9D1-201ENST00000389386 PMPCAQ10713 525 aa13.16□□□□□ -0.3
VPS9D1-201ENST00000389386 DPY19L2P2Q6ZN68 376 aa13.16□□□□□ -0.3
VPS9D1-201ENST00000389386 ERN2Q76MJ5 926 aaKnown RBP13.16□□□□□ -0.3
VPS9D1-201ENST00000389386 PRSS35Q8N3Z0 413 aa13.16□□□□□ -0.3
VPS9D1-201ENST00000389386 OR5T3Q8NGG3 340 aa13.16□□□□□ -0.3
VPS9D1-201ENST00000389386 COL26A1Q96A83 441 aa13.16□□□□□ -0.3
VPS9D1-201ENST00000389386 PLA2G2FQ9BZM2 168 aa13.16□□□□□ -0.3
VPS9D1-201ENST00000389386 ZNF576Q9H609 170 aa13.16□□□□□ -0.3
VPS9D1-201ENST00000389386 GDE1Q9NZC3 331 aa13.16□□□□□ -0.3
VPS9D1-201ENST00000389386 SERGEFQ9UGK8 458 aa13.16□□□□□ -0.3
VPS9D1-201ENST00000389386 ELOA3DA6NLF2 546 aaPredicted RBP13.16□□□□□ -0.3
VPS9D1-201ENST00000389386 HKR1P10072 659 aa13.16□□□□□ -0.3
VPS9D1-201ENST00000389386 CD81P60033 236 aa13.16□□□□□ -0.3
VPS9D1-201ENST00000389386 RAB1AP62820 205 aa13.16□□□□□ -0.3
VPS9D1-201ENST00000389386 TDGQ13569 410 aa13.16□□□□□ -0.3
VPS9D1-201ENST00000389386 ELOA3BQ3SY89 546 aa13.16□□□□□ -0.3
VPS9D1-201ENST00000389386 MOGAT2Q3SYC2 334 aa13.16□□□□□ -0.3
VPS9D1-201ENST00000389386 RTL10Q7L3V2 364 aa13.16□□□□□ -0.3
VPS9D1-201ENST00000389386 LINC01555Q8NAE3 123 aa13.16□□□□□ -0.3
VPS9D1-201ENST00000389386 ELOA3Q8NG57 546 aa13.16□□□□□ -0.3
VPS9D1-201ENST00000389386 MAFIPQ8WZ33 124 aa13.16□□□□□ -0.3
VPS9D1-201ENST00000389386 MR1Q95460 341 aa13.16□□□□□ -0.3
VPS9D1-201ENST00000389386 PTCHD1Q96NR3 888 aa13.16□□□□□ -0.3
VPS9D1-201ENST00000389386 KXD1Q9BQD3 176 aa13.16□□□□□ -0.3
VPS9D1-201ENST00000389386 PDE7BQ9NP56 450 aa13.16□□□□□ -0.3
VPS9D1-201ENST00000389386 FITM1A5D6W6 292 aa13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 TMEM235A6NFC5 223 aa13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 CLDN4O14493 209 aa13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 ARPC3O15145 178 aa13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 BRINP1O60477 761 aa13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 OR2C1O95371 312 aa13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 SNCAP37840 140 aa13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 RPS23P62266 143 aaKnown RBP13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 EBPQ15125 230 aaKnown RBP13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 DCST2Q5T1A1 773 aa13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 TMEM268Q5VZI3 342 aa13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 ASPHD2Q6ICH7 369 aa13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 OR2A2Q6IF42 318 aa13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 DPPA2Q7Z7J5 298 aa13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 NRROSQ86YC3 692 aa13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 PLPP7Q8NBV4 271 aa13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 RNF128Q8TEB7 428 aa13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 LCN9Q8WX39 176 aa13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 ZNF514Q96K75 400 aaPredicted RBP13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 RPP25Q9BUL9 199 aaKnown RBP13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 SLC2A4RGQ9NR83 387 aa13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 IKZF2Q9UKS7 526 aa13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 C4orf47A7E2U8 309 aa13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 UMAD1C9J7I0 102 aa13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 RPL36A-HNRNPH2H7BZ11 118 aa13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 TAAR5O14804 337 aa13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 RAB6AP20340 208 aa13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 LSSP48449 732 aa13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 VASPP50552 380 aaPredicted RBP13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 SEC13P55735 322 aa13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 GUK1Q16774 197 aa13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 GXYLT1Q4G148 440 aa13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 VITQ6UXI7 678 aa13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 SPNS3Q6ZMD2 512 aa13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 HIST2H3AQ71DI3 136 aa13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 OR2L5Q8NG80 312 aa13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 TSSK2Q96PF2 358 aa13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 ADAP2Q9NPF8 381 aa13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 DNAJB11Q9UBS4 358 aa13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 AMDHD2Q9Y303 409 aa13.15□□□□□ -0.3
VPS9D1-201ENST00000389386 TSPAN15O95858 294 aa13.14□□□□□ -0.31
VPS9D1-201ENST00000389386 GPANK1O95872 356 aa13.14□□□□□ -0.31
VPS9D1-201ENST00000389386 EDN3P14138 238 aa13.14□□□□□ -0.31
VPS9D1-201ENST00000389386 IGFBP4P22692 258 aa13.14□□□□□ -0.31
VPS9D1-201ENST00000389386 CEACAM6P40199 344 aa13.14□□□□□ -0.31
VPS9D1-201ENST00000389386 KIR3DL2P43630 455 aa13.14□□□□□ -0.31
VPS9D1-201ENST00000389386 UCP2P55851 309 aa13.14□□□□□ -0.31
VPS9D1-201ENST00000389386 RAP1AP62834 184 aa13.14□□□□□ -0.31
VPS9D1-201ENST00000389386 SRSF5Q13243 272 aaKnown RBP13.14□□□□□ -0.31
VPS9D1-201ENST00000389386 GALNT14Q96FL9 552 aa13.14□□□□□ -0.31
VPS9D1-201ENST00000389386 MRPL37Q9BZE1 423 aaKnown RBP13.14□□□□□ -0.31
VPS9D1-201ENST00000389386 MBNL1Q9NR56 388 aaKnown RBP13.14□□□□□ -0.31
VPS9D1-201ENST00000389386 UBQLN4Q9NRR5 601 aa13.14□□□□□ -0.31
VPS9D1-201ENST00000389386 LAMP5Q9UJQ1 280 aa13.14□□□□□ -0.31
VPS9D1-201ENST00000389386 GPR34Q9UPC5 381 aa13.14□□□□□ -0.31
VPS9D1-201ENST00000389386 SPEGQ15772 3267 aa13.14□□□□□ -0.31
VPS9D1-201ENST00000389386 CCKBRP32239 447 aa13.14□□□□□ -0.31
VPS9D1-201ENST00000389386 GJA4P35212 333 aa13.14□□□□□ -0.31
VPS9D1-201ENST00000389386 CDKN2AP42771 156 aaKnown RBP13.14□□□□□ -0.31
VPS9D1-201ENST00000389386 RABIFP47224 123 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms