RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 ORAI1Q96D31 301 aa23.44■■□□□ 1.34
MSX1-201ENST00000382723 SLC24A3Q9HC58 644 aa23.44■■□□□ 1.34
MSX1-201ENST00000382723 PMF1-BGLAPU3KQ54 211 aa23.44■■□□□ 1.34
MSX1-201ENST00000382723 DOCK7Q96N67 2140 aa23.44■■□□□ 1.34
MSX1-201ENST00000382723 ZNF503-AS2A6NEH8 195 aa23.43■■□□□ 1.34
MSX1-201ENST00000382723 GATBO75879 557 aaKnown RBP23.43■■□□□ 1.34
MSX1-201ENST00000382723 IL1AP01583 271 aa23.43■■□□□ 1.34
MSX1-201ENST00000382723 CRHP06850 196 aa23.43■■□□□ 1.34
MSX1-201ENST00000382723 HTR5AP47898 357 aa23.43■■□□□ 1.34
MSX1-201ENST00000382723 Q499Y3 187 aa23.43■■□□□ 1.34
MSX1-201ENST00000382723 PAMR1Q6UXH9 720 aa23.43■■□□□ 1.34
MSX1-201ENST00000382723 FAM57BQ71RH2 274 aa23.43■■□□□ 1.34
MSX1-201ENST00000382723 GPR148Q8TDV2 347 aa23.43■■□□□ 1.34
MSX1-201ENST00000382723 TSEN15Q8WW01 171 aaKnown RBP23.43■■□□□ 1.34
MSX1-201ENST00000382723 BCL2L2Q92843 193 aaPredicted RBP23.43■■□□□ 1.34
MSX1-201ENST00000382723 SPTSSAQ969W0 71 aa23.43■■□□□ 1.34
MSX1-201ENST00000382723 NOX4Q9NPH5 578 aa23.43■■□□□ 1.34
MSX1-201ENST00000382723 ARHGAP21Q5T5U3 1957 aa23.43■■□□□ 1.34
MSX1-201ENST00000382723 P2RY10O00398 339 aa23.43■■□□□ 1.34
MSX1-201ENST00000382723 RAD51DO75771 328 aa23.43■■□□□ 1.34
MSX1-201ENST00000382723 CGAP01215 116 aa23.43■■□□□ 1.34
MSX1-201ENST00000382723 CTSSP25774 331 aa23.43■■□□□ 1.34
MSX1-201ENST00000382723 PMPCAQ10713 525 aa23.43■■□□□ 1.34
MSX1-201ENST00000382723 SFRP5Q5T4F7 317 aa23.43■■□□□ 1.34
MSX1-201ENST00000382723 UNQ9370/PRO34162Q6UXP9 181 aa23.43■■□□□ 1.34
MSX1-201ENST00000382723 WACQ9BTA9 647 aa23.43■■□□□ 1.34
MSX1-201ENST00000382723 SLIRPQ9GZT3 109 aaKnown RBP23.43■■□□□ 1.34
MSX1-201ENST00000382723 ITPR1Q14643 2758 aa23.42■■□□□ 1.34
MSX1-201ENST00000382723 ERVH48-1M5A8F1 160 aa23.42■■□□□ 1.34
MSX1-201ENST00000382723 CNOT4O95628 575 aaKnown RBP23.42■■□□□ 1.34
MSX1-201ENST00000382723 ANOS1P23352 680 aa23.42■■□□□ 1.34
MSX1-201ENST00000382723 TGFBR3Q03167 851 aa23.42■■□□□ 1.34
MSX1-201ENST00000382723 LSAMPQ13449 338 aa23.42■■□□□ 1.34
MSX1-201ENST00000382723 TSC22D1Q15714 1073 aa23.42■■□□□ 1.34
MSX1-201ENST00000382723 EIF2S3LQ2VIR3 472 aaKnown RBP23.42■■□□□ 1.34
MSX1-201ENST00000382723 ZNF704Q6ZNC4 412 aaPredicted RBP23.42■■□□□ 1.34
MSX1-201ENST00000382723 ELMOD2Q8IZ81 293 aa23.42■■□□□ 1.34
MSX1-201ENST00000382723 ZFP3Q96NJ6 502 aa23.42■■□□□ 1.34
MSX1-201ENST00000382723 NOX3Q9HBY0 568 aa23.42■■□□□ 1.34
MSX1-201ENST00000382723 CCDC59Q9P031 241 aaKnown RBP23.42■■□□□ 1.34
MSX1-201ENST00000382723 NUFIP1Q9UHK0 495 aaKnown RBP23.42■■□□□ 1.34
MSX1-201ENST00000382723 NCOA6Q14686 2063 aaPredicted RBP23.42■■□□□ 1.34
MSX1-201ENST00000382723 TRBV5-5A0A0J9YX44 114 aa23.41■■□□□ 1.34
MSX1-201ENST00000382723 CIB4A0PJX0 185 aa23.41■■□□□ 1.34
MSX1-201ENST00000382723 OR6C6A6NF89 314 aa23.41■■□□□ 1.34
MSX1-201ENST00000382723 M0R135 149 aa23.41■■□□□ 1.34
MSX1-201ENST00000382723 TTRP02766 147 aa23.41■■□□□ 1.34
MSX1-201ENST00000382723 UCHL1P09936 223 aa23.41■■□□□ 1.34
MSX1-201ENST00000382723 MYL9P24844 172 aa23.41■■□□□ 1.34
MSX1-201ENST00000382723 CEACAM8P31997 349 aaPredicted RBP23.41■■□□□ 1.34
MSX1-201ENST00000382723 SOX6P35712 828 aa23.41■■□□□ 1.34
MSX1-201ENST00000382723 CAV3P56539 151 aa23.41■■□□□ 1.34
MSX1-201ENST00000382723 ECH1Q13011 328 aa23.41■■□□□ 1.34
MSX1-201ENST00000382723 PCSK4Q6UW60 755 aa23.41■■□□□ 1.34
MSX1-201ENST00000382723 OR8B12Q8NGG6 310 aa23.41■■□□□ 1.34
MSX1-201ENST00000382723 ZNF799Q96GE5 643 aa23.41■■□□□ 1.34
MSX1-201ENST00000382723 DERL3Q96Q80 235 aa23.41■■□□□ 1.34
MSX1-201ENST00000382723 MED18Q9BUE0 208 aa23.41■■□□□ 1.34
MSX1-201ENST00000382723 MOB1AQ9H8S9 216 aa23.41■■□□□ 1.34
MSX1-201ENST00000382723 LOC107986453A0A1B0GWG9 222 aa23.41■■□□□ 1.34
MSX1-201ENST00000382723 ARL6IP5O75915 188 aa23.41■■□□□ 1.34
MSX1-201ENST00000382723 NCR1O76036 304 aa23.41■■□□□ 1.34
MSX1-201ENST00000382723 TBRG1Q3YBR2 411 aa23.41■■□□□ 1.34
MSX1-201ENST00000382723 HSD17B12Q53GQ0 312 aa23.41■■□□□ 1.34
MSX1-201ENST00000382723 LUZP2Q86TE4 346 aa23.41■■□□□ 1.34
MSX1-201ENST00000382723 CPEB3Q8NE35 698 aaKnown RBP23.41■■□□□ 1.34
MSX1-201ENST00000382723 BARHL1Q9BZE3 327 aa23.41■■□□□ 1.34
MSX1-201ENST00000382723 PIN1P1O15428 100 aa23.4■■□□□ 1.34
MSX1-201ENST00000382723 CLPXO76031 633 aa23.4■■□□□ 1.34
MSX1-201ENST00000382723 UBCP0CG48 685 aaKnown RBP23.4■■□□□ 1.34
MSX1-201ENST00000382723 CRYGSP22914 178 aa23.4■■□□□ 1.34
MSX1-201ENST00000382723 OTX1P32242 354 aaPredicted RBP23.4■■□□□ 1.34
MSX1-201ENST00000382723 RAB1AP62820 205 aa23.4■■□□□ 1.34
MSX1-201ENST00000382723 HNRNPA0Q13151 305 aaKnown RBP23.4■■□□□ 1.34
MSX1-201ENST00000382723 ZNF433Q8N7K0 673 aaPredicted RBP23.4■■□□□ 1.34
MSX1-201ENST00000382723 SLC25A46Q96AG3 418 aa23.4■■□□□ 1.34
MSX1-201ENST00000382723 PGAM5Q96HS1 289 aa23.4■■□□□ 1.34
MSX1-201ENST00000382723 ZNF319Q9P2F9 582 aa23.4■■□□□ 1.34
MSX1-201ENST00000382723 ACSM4P0C7M7 580 aa23.39■■□□□ 1.34
MSX1-201ENST00000382723 MTNR1BP49286 362 aa23.39■■□□□ 1.34
MSX1-201ENST00000382723 RORCP51449 518 aa23.39■■□□□ 1.34
MSX1-201ENST00000382723 GFOD2Q3B7J2 385 aa23.39■■□□□ 1.34
MSX1-201ENST00000382723 TMEM244Q5VVB8 128 aa23.39■■□□□ 1.34
MSX1-201ENST00000382723 TMEM53Q6P2H8 277 aa23.39■■□□□ 1.34
MSX1-201ENST00000382723 NCCRP1Q6ZVX7 275 aaPredicted RBP23.39■■□□□ 1.34
MSX1-201ENST00000382723 GABRG1Q8N1C3 465 aa23.39■■□□□ 1.34
MSX1-201ENST00000382723 MCFD2Q8NI22 146 aa23.39■■□□□ 1.34
MSX1-201ENST00000382723 TMEM106AQ96A25 262 aa23.39■■□□□ 1.34
MSX1-201ENST00000382723 SLC17A5Q9NRA2 495 aa23.39■■□□□ 1.34
MSX1-201ENST00000382723 DHDHQ9UQ10 334 aa23.39■■□□□ 1.34
MSX1-201ENST00000382723 C5orf63A6NC05 138 aa23.39■■□□□ 1.33
MSX1-201ENST00000382723 ANKRD61A6NGH8 418 aa23.39■■□□□ 1.33
MSX1-201ENST00000382723 ISG15P05161 165 aa23.39■■□□□ 1.33
MSX1-201ENST00000382723 MAPK3P27361 379 aaPredicted RBP23.39■■□□□ 1.33
MSX1-201ENST00000382723 ARR3P36575 388 aa23.39■■□□□ 1.33
MSX1-201ENST00000382723 TPTEP56180 551 aa23.39■■□□□ 1.33
MSX1-201ENST00000382723 PRSS45Q7RTY3 260 aa23.39■■□□□ 1.33
MSX1-201ENST00000382723 COMMD2Q86X83 199 aa23.39■■□□□ 1.33
MSX1-201ENST00000382723 OR51E1Q8TCB6 317 aa23.39■■□□□ 1.33
MSX1-201ENST00000382723 SFXN3Q9BWM7 321 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms