RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 CSNK2A1P68400 391 aaPredicted RBP11.22□□□□□ -0.61
VPS16-202ENST00000380445 FOXK1P85037 733 aa11.22□□□□□ -0.61
VPS16-202ENST00000380445 BTN1A1Q13410 526 aa11.22□□□□□ -0.61
VPS16-202ENST00000380445 AANATQ16613 207 aa11.22□□□□□ -0.61
VPS16-202ENST00000380445 HIST3H3Q16695 136 aa11.22□□□□□ -0.61
VPS16-202ENST00000380445 GLYATL3Q5SZD4 288 aa11.22□□□□□ -0.61
VPS16-202ENST00000380445 RAET1LQ5VY80 246 aa11.22□□□□□ -0.61
VPS16-202ENST00000380445 NAA11Q9BSU3 229 aaPredicted RBP11.22□□□□□ -0.61
VPS16-202ENST00000380445 PTTG3PQ9NZH4 202 aa11.22□□□□□ -0.61
VPS16-202ENST00000380445 GDF2Q9UK05 429 aaPredicted RBP11.22□□□□□ -0.61
VPS16-202ENST00000380445 A0A0A6YYH2 397 aa11.21□□□□□ -0.61
VPS16-202ENST00000380445 TMEM272A0A1B0GTI8 110 aa11.21□□□□□ -0.61
VPS16-202ENST00000380445 A6NJ64 397 aa11.21□□□□□ -0.61
VPS16-202ENST00000380445 LINC01387J3KSC0 135 aa11.21□□□□□ -0.61
VPS16-202ENST00000380445 P2RY10O00398 339 aa11.21□□□□□ -0.61
VPS16-202ENST00000380445 TGM6O95932 706 aa11.21□□□□□ -0.61
VPS16-202ENST00000380445 HOXB1P14653 301 aaPredicted RBP11.21□□□□□ -0.61
VPS16-202ENST00000380445 PRSS3P35030 304 aa11.21□□□□□ -0.61
VPS16-202ENST00000380445 EIF1AXP47813 144 aaKnown RBP11.21□□□□□ -0.61
VPS16-202ENST00000380445 GABREP78334 506 aa11.21□□□□□ -0.61
VPS16-202ENST00000380445 TAF13Q15543 124 aa11.21□□□□□ -0.61
VPS16-202ENST00000380445 KCNMB1Q16558 191 aa11.21□□□□□ -0.61
VPS16-202ENST00000380445 METTL11BQ5VVY1 283 aa11.21□□□□□ -0.61
VPS16-202ENST00000380445 FIP1L1Q6UN15 594 aaKnown RBP11.21□□□□□ -0.61
VPS16-202ENST00000380445 COMMD7Q86VX2 200 aa11.21□□□□□ -0.61
VPS16-202ENST00000380445 OR11H7Q8NGC8 314 aa11.21□□□□□ -0.61
VPS16-202ENST00000380445 SLC25A28Q96A46 364 aa11.21□□□□□ -0.61
VPS16-202ENST00000380445 PTX4Q96A99 478 aa11.21□□□□□ -0.61
VPS16-202ENST00000380445 NTNG2Q96CW9 530 aa11.21□□□□□ -0.61
VPS16-202ENST00000380445 SORCS2Q96PQ0 1159 aa11.21□□□□□ -0.61
VPS16-202ENST00000380445 ATG5Q9H1Y0 275 aa11.21□□□□□ -0.61
VPS16-202ENST00000380445 NKIRAS2Q9NYR9 191 aa11.21□□□□□ -0.61
VPS16-202ENST00000380445 ZNF175Q9Y473 711 aa11.21□□□□□ -0.61
VPS16-202ENST00000380445 TRAV18A0A075B6X5 111 aa11.21□□□□□ -0.62
VPS16-202ENST00000380445 A0A1B0GVI7 797 aa11.21□□□□□ -0.62
VPS16-202ENST00000380445 GJE1A6NN92 205 aa11.21□□□□□ -0.62
VPS16-202ENST00000380445 SYT7O43581 403 aa11.21□□□□□ -0.62
VPS16-202ENST00000380445 QDPRP09417 244 aa11.21□□□□□ -0.62
VPS16-202ENST00000380445 MPLP40238 635 aa11.21□□□□□ -0.62
VPS16-202ENST00000380445 PER3P56645 1201 aa11.21□□□□□ -0.62
VPS16-202ENST00000380445 H3F3AP84243 136 aa11.21□□□□□ -0.62
VPS16-202ENST00000380445 BAMBIQ13145 260 aa11.21□□□□□ -0.62
VPS16-202ENST00000380445 LPAL2Q16609 132 aa11.21□□□□□ -0.62
VPS16-202ENST00000380445 CARD17Q5XLA6 110 aa11.21□□□□□ -0.62
VPS16-202ENST00000380445 TEX261Q6UWH6 196 aa11.21□□□□□ -0.62
VPS16-202ENST00000380445 TMEM41AQ96HV5 264 aa11.21□□□□□ -0.62
VPS16-202ENST00000380445 GNRHR2Q96P88 292 aa11.21□□□□□ -0.62
VPS16-202ENST00000380445 PIGQQ9BRB3 760 aa11.21□□□□□ -0.62
VPS16-202ENST00000380445 PBOV1Q9GZY1 135 aa11.21□□□□□ -0.62
VPS16-202ENST00000380445 LOXL2Q9Y4K0 774 aa11.21□□□□□ -0.62
VPS16-202ENST00000380445 U3KQ87 197 aa11.21□□□□□ -0.62
VPS16-202ENST00000380445 LOC390937A0A1W2PQ73 354 aa11.2□□□□□ -0.62
VPS16-202ENST00000380445 DCDC2BA2VCK2 349 aa11.2□□□□□ -0.62
VPS16-202ENST00000380445 ZNF814B7Z6K7 855 aa11.2□□□□□ -0.62
VPS16-202ENST00000380445 SULT1C2O00338 296 aa11.2□□□□□ -0.62
VPS16-202ENST00000380445 SSNA1O43805 119 aa11.2□□□□□ -0.62
VPS16-202ENST00000380445 TTRP02766 147 aa11.2□□□□□ -0.62
VPS16-202ENST00000380445 ACSM4P0C7M7 580 aa11.2□□□□□ -0.62
VPS16-202ENST00000380445 GABRA1P14867 456 aa11.2□□□□□ -0.62
VPS16-202ENST00000380445 EFNB2P52799 333 aa11.2□□□□□ -0.62
VPS16-202ENST00000380445 ST3GAL2Q16842 350 aa11.2□□□□□ -0.62
VPS16-202ENST00000380445 PCGF3Q3KNV8 242 aa11.2□□□□□ -0.62
VPS16-202ENST00000380445 C1orf100Q5SVJ3 147 aa11.2□□□□□ -0.62
VPS16-202ENST00000380445 C6orf15Q6UXA7 325 aaPredicted RBP11.2□□□□□ -0.62
VPS16-202ENST00000380445 ADGRE4PQ86SQ3 457 aa11.2□□□□□ -0.62
VPS16-202ENST00000380445 JAGN1Q8N5M9 183 aa11.2□□□□□ -0.62
VPS16-202ENST00000380445 TMEM105Q8N8V8 129 aa11.2□□□□□ -0.62
VPS16-202ENST00000380445 ZNF680Q8NEM1 530 aa11.2□□□□□ -0.62
VPS16-202ENST00000380445 JSRP1Q96MG2 331 aaPredicted RBP11.2□□□□□ -0.62
VPS16-202ENST00000380445 NOX3Q9HBY0 568 aa11.2□□□□□ -0.62
VPS16-202ENST00000380445 PROK2Q9HC23 129 aa11.2□□□□□ -0.62
VPS16-202ENST00000380445 ELF5Q9UKW6 265 aaPredicted RBP11.2□□□□□ -0.62
VPS16-202ENST00000380445 TCFL5Q9UL49 500 aa11.2□□□□□ -0.62
VPS16-202ENST00000380445 LHFPL6Q9Y693 200 aa11.2□□□□□ -0.62
VPS16-202ENST00000380445 A0A1B0GUH1 482 aa11.2□□□□□ -0.62
VPS16-202ENST00000380445 PTHLHP12272 177 aa11.2□□□□□ -0.62
VPS16-202ENST00000380445 BDKRB2P30411 391 aa11.2□□□□□ -0.62
VPS16-202ENST00000380445 CLDN17P56750 224 aa11.2□□□□□ -0.62
VPS16-202ENST00000380445 ACTBP60709 375 aa11.2□□□□□ -0.62
VPS16-202ENST00000380445 PSMA6P60900 246 aaKnown RBP11.2□□□□□ -0.62
VPS16-202ENST00000380445 ACTG1P63261 375 aa11.2□□□□□ -0.62
VPS16-202ENST00000380445 SPOCK1Q08629 439 aa11.2□□□□□ -0.62
VPS16-202ENST00000380445 PLA2G7Q13093 441 aa11.2□□□□□ -0.62
VPS16-202ENST00000380445 SSPNQ14714 243 aa11.2□□□□□ -0.62
VPS16-202ENST00000380445 POU4F3Q15319 338 aa11.2□□□□□ -0.62
VPS16-202ENST00000380445 ZNF528Q3MIS6 628 aa11.2□□□□□ -0.62
VPS16-202ENST00000380445 ZNF782Q6ZMW2 699 aaPredicted RBP11.2□□□□□ -0.62
VPS16-202ENST00000380445 OR5D14Q8NGL3 314 aa11.2□□□□□ -0.62
VPS16-202ENST00000380445 SMOC1Q9H4F8 434 aa11.2□□□□□ -0.62
VPS16-202ENST00000380445 MYO15AQ9UKN7 3530 aa11.19□□□□□ -0.62
VPS16-202ENST00000380445 OR2M5A3KFT3 312 aa11.19□□□□□ -0.62
VPS16-202ENST00000380445 ZIC3O60481 467 aa11.19□□□□□ -0.62
VPS16-202ENST00000380445 P04436 131 aa11.19□□□□□ -0.62
VPS16-202ENST00000380445 SULT1A3P0DMM9 295 aa11.19□□□□□ -0.62
VPS16-202ENST00000380445 SULT1A4P0DMN0 295 aa11.19□□□□□ -0.62
VPS16-202ENST00000380445 TCN2P20062 427 aa11.19□□□□□ -0.62
VPS16-202ENST00000380445 RAC1P63000 192 aa11.19□□□□□ -0.62
VPS16-202ENST00000380445 CHAF1BQ13112 559 aa11.19□□□□□ -0.62
VPS16-202ENST00000380445 SLC25A25Q6KCM7 469 aa11.19□□□□□ -0.62
VPS16-202ENST00000380445 CFAP77Q6ZQR2 320 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms