RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 GUCA1AP43080 201 aaPredicted RBP11.11□□□□□ -0.63
CLCN6-205ENST00000376492 SELENOVP59797 346 aa11.11□□□□□ -0.63
CLCN6-205ENST00000376492 TUSC1Q2TAM9 212 aa11.11□□□□□ -0.63
CLCN6-205ENST00000376492 TMEM255AQ5JRV8 349 aa11.11□□□□□ -0.63
CLCN6-205ENST00000376492 RPL13AP3Q6NVV1 102 aa11.11□□□□□ -0.63
CLCN6-205ENST00000376492 TMEM53Q6P2H8 277 aa11.11□□□□□ -0.63
CLCN6-205ENST00000376492 RBMS3Q6XE24 437 aaKnown RBP11.11□□□□□ -0.63
CLCN6-205ENST00000376492 DOK3Q7L591 496 aa11.11□□□□□ -0.63
CLCN6-205ENST00000376492 TMEM179BQ7Z7N9 219 aa11.11□□□□□ -0.63
CLCN6-205ENST00000376492 ADCK1Q86TW2 530 aa11.11□□□□□ -0.63
CLCN6-205ENST00000376492 BCL6BQ8N143 479 aaPredicted RBP11.11□□□□□ -0.63
CLCN6-205ENST00000376492 ATG16L2Q8NAA4 619 aa11.11□□□□□ -0.63
CLCN6-205ENST00000376492 TIMD4Q96H15 378 aa11.11□□□□□ -0.63
CLCN6-205ENST00000376492 FEVQ99581 238 aa11.11□□□□□ -0.63
CLCN6-205ENST00000376492 GABARAPL3Q9BY60 117 aa11.11□□□□□ -0.63
CLCN6-205ENST00000376492 KCNN2Q9H2S1 579 aa11.11□□□□□ -0.63
CLCN6-205ENST00000376492 OR52D1Q9H346 318 aa11.11□□□□□ -0.63
CLCN6-205ENST00000376492 SAP30LQ9HAJ7 183 aa11.11□□□□□ -0.63
CLCN6-205ENST00000376492 DECR2Q9NUI1 292 aa11.11□□□□□ -0.63
CLCN6-205ENST00000376492 VNN3Q9NY84 501 aa11.11□□□□□ -0.63
CLCN6-205ENST00000376492 SLCO1C1Q9NYB5 712 aa11.11□□□□□ -0.63
CLCN6-205ENST00000376492 NKIRAS2Q9NYR9 191 aa11.11□□□□□ -0.63
CLCN6-205ENST00000376492 UBAP1Q9NZ09 502 aa11.11□□□□□ -0.63
CLCN6-205ENST00000376492 VSX1Q9NZR4 365 aaPredicted RBP11.11□□□□□ -0.63
CLCN6-205ENST00000376492 GPR160Q9UJ42 338 aa11.11□□□□□ -0.63
CLCN6-205ENST00000376492 LRCH1Q9Y2L9 728 aa11.11□□□□□ -0.63
CLCN6-205ENST00000376492 U3KQV3 271 aa11.11□□□□□ -0.63
CLCN6-205ENST00000376492 ISPDA4D126 451 aa11.1□□□□□ -0.63
CLCN6-205ENST00000376492 H7C1C5 153 aa11.1□□□□□ -0.63
CLCN6-205ENST00000376492 DLGAP1O14490 977 aa11.1□□□□□ -0.63
CLCN6-205ENST00000376492 IDH3BO43837 385 aa11.1□□□□□ -0.63
CLCN6-205ENST00000376492 PTHP01270 115 aa11.1□□□□□ -0.63
CLCN6-205ENST00000376492 GATA3P23771 443 aa11.1□□□□□ -0.63
CLCN6-205ENST00000376492 CDKN2AP42771 156 aaKnown RBP11.1□□□□□ -0.63
CLCN6-205ENST00000376492 DAPP51397 102 aa11.1□□□□□ -0.63
CLCN6-205ENST00000376492 AQP4P55087 323 aa11.1□□□□□ -0.63
CLCN6-205ENST00000376492 LCN6P62502 163 aa11.1□□□□□ -0.63
CLCN6-205ENST00000376492 TEKQ02763 1124 aa11.1□□□□□ -0.63
CLCN6-205ENST00000376492 KRR1Q13601 381 aaKnown RBP11.1□□□□□ -0.63
CLCN6-205ENST00000376492 SGCAQ16586 387 aa11.1□□□□□ -0.63
CLCN6-205ENST00000376492 LRRC36Q1X8D7 754 aa11.1□□□□□ -0.63
CLCN6-205ENST00000376492 HFEQ30201 348 aa11.1□□□□□ -0.63
CLCN6-205ENST00000376492 SLC36A3Q495N2 470 aa11.1□□□□□ -0.63
CLCN6-205ENST00000376492 ZNF620Q6ZNG0 422 aa11.1□□□□□ -0.63
CLCN6-205ENST00000376492 LRRC18Q8N456 261 aa11.1□□□□□ -0.63
CLCN6-205ENST00000376492 DHRSXQ8N5I4 330 aa11.1□□□□□ -0.63
CLCN6-205ENST00000376492 DEFB108BQ8NET1 73 aa11.1□□□□□ -0.63
CLCN6-205ENST00000376492 OR9Q2Q8NGE9 314 aa11.1□□□□□ -0.63
CLCN6-205ENST00000376492 FANK1Q8TC84 345 aa11.1□□□□□ -0.63
CLCN6-205ENST00000376492 C11orf40Q8WZ69 217 aa11.1□□□□□ -0.63
CLCN6-205ENST00000376492 CCL17Q92583 94 aa11.1□□□□□ -0.63
CLCN6-205ENST00000376492 RAB1CQ92928 201 aa11.1□□□□□ -0.63
CLCN6-205ENST00000376492 RASD2Q96D21 266 aa11.1□□□□□ -0.63
CLCN6-205ENST00000376492 SAMD8Q96LT4 415 aa11.1□□□□□ -0.63
CLCN6-205ENST00000376492 ZNF48Q96MX3 618 aaPredicted RBP11.1□□□□□ -0.63
CLCN6-205ENST00000376492 ERMAPQ96PL5 475 aaPredicted RBP11.1□□□□□ -0.63
CLCN6-205ENST00000376492 ANKRD60Q9BZ19 345 aa11.1□□□□□ -0.63
CLCN6-205ENST00000376492 C1orf198Q9H425 327 aa11.1□□□□□ -0.63
CLCN6-205ENST00000376492 RNF121Q9H920 327 aa11.1□□□□□ -0.63
CLCN6-205ENST00000376492 CDH20Q9HBT6 801 aa11.1□□□□□ -0.63
CLCN6-205ENST00000376492 PAPOLBQ9NRJ5 636 aaKnown RBP11.1□□□□□ -0.63
CLCN6-205ENST00000376492 KRT84Q9NSB2 600 aa11.1□□□□□ -0.63
CLCN6-205ENST00000376492 IL20Q9NYY1 176 aa11.1□□□□□ -0.63
CLCN6-205ENST00000376492 KIF17Q9P2E2 1029 aa11.1□□□□□ -0.63
CLCN6-205ENST00000376492 ZNF69Q9UC07 566 aa11.1□□□□□ -0.63
CLCN6-205ENST00000376492 WNK2Q9Y3S1 2297 aa11.1□□□□□ -0.63
CLCN6-205ENST00000376492 NOTCH1P46531 2555 aa11.1□□□□□ -0.63
CLCN6-205ENST00000376492 A0A0G2JK05 382 aa11.09□□□□□ -0.63
CLCN6-205ENST00000376492 SPRY3O43610 288 aa11.09□□□□□ -0.63
CLCN6-205ENST00000376492 PPP1R3DO95685 299 aa11.09□□□□□ -0.63
CLCN6-205ENST00000376492 IGHV1-46P01743 117 aa11.09□□□□□ -0.63
CLCN6-205ENST00000376492 CST2P09228 141 aa11.09□□□□□ -0.63
CLCN6-205ENST00000376492 CTLA4P16410 223 aa11.09□□□□□ -0.63
CLCN6-205ENST00000376492 LAP3P28838 519 aa11.09□□□□□ -0.63
CLCN6-205ENST00000376492 UCP2P55851 309 aa11.09□□□□□ -0.63
CLCN6-205ENST00000376492 ADARB1P78563 741 aaKnown RBP11.09□□□□□ -0.63
CLCN6-205ENST00000376492 PLP2Q04941 152 aa11.09□□□□□ -0.63
CLCN6-205ENST00000376492 PPP1R8Q12972 351 aaKnown RBP11.09□□□□□ -0.63
CLCN6-205ENST00000376492 BAMBIQ13145 260 aa11.09□□□□□ -0.63
CLCN6-205ENST00000376492 MED21Q13503 144 aa11.09□□□□□ -0.63
CLCN6-205ENST00000376492 KLF17Q5JT82 389 aaPredicted RBP11.09□□□□□ -0.63
CLCN6-205ENST00000376492 RASSF6Q6ZTQ3 369 aa11.09□□□□□ -0.63
CLCN6-205ENST00000376492 PTCHD4Q6ZW05 846 aa11.09□□□□□ -0.63
CLCN6-205ENST00000376492 SYT9Q86SS6 491 aa11.09□□□□□ -0.63
CLCN6-205ENST00000376492 GALNT4Q8N4A0 578 aa11.09□□□□□ -0.63
CLCN6-205ENST00000376492 AQP11Q8NBQ7 271 aa11.09□□□□□ -0.63
CLCN6-205ENST00000376492 ZNF555Q8NEP9 628 aa11.09□□□□□ -0.63
CLCN6-205ENST00000376492 WACQ9BTA9 647 aa11.09□□□□□ -0.63
CLCN6-205ENST00000376492 ADI1Q9BV57 179 aa11.09□□□□□ -0.63
CLCN6-205ENST00000376492 IFT27Q9BW83 186 aa11.09□□□□□ -0.63
CLCN6-205ENST00000376492 SYT4Q9H2B2 425 aa11.09□□□□□ -0.63
CLCN6-205ENST00000376492 POLE4Q9NR33 117 aa11.09□□□□□ -0.63
CLCN6-205ENST00000376492 MMP26Q9NRE1 261 aa11.09□□□□□ -0.63
CLCN6-205ENST00000376492 CDH10Q9Y6N8 788 aa11.09□□□□□ -0.63
CLCN6-205ENST00000376492 CMYA5Q8N3K9 4069 aa11.09□□□□□ -0.63
CLCN6-205ENST00000376492 IQCMA0A1B0GVH7 501 aa11.08□□□□□ -0.64
CLCN6-205ENST00000376492 ZSCAN5BA6NJL1 495 aa11.08□□□□□ -0.64
CLCN6-205ENST00000376492 SLC16A7O60669 478 aa11.08□□□□□ -0.64
CLCN6-205ENST00000376492 KHDRBS3O75525 346 aaKnown RBP11.08□□□□□ -0.64
CLCN6-205ENST00000376492 SNAP29O95721 258 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms