RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 CD63P08962 238 aa12.28□□□□□ -0.44
USP49-201ENST00000373006 TPT1P13693 172 aaKnown RBP12.28□□□□□ -0.44
USP49-201ENST00000373006 ST6GAL1P15907 406 aa12.28□□□□□ -0.44
USP49-201ENST00000373006 DCDP81605 110 aaKnown RBP12.28□□□□□ -0.44
USP49-201ENST00000373006 MICBQ29980 383 aa12.28□□□□□ -0.44
USP49-201ENST00000373006 KIF26BQ2KJY2 2108 aa12.28□□□□□ -0.44
USP49-201ENST00000373006 SLC18B1Q6NT16 456 aa12.28□□□□□ -0.44
USP49-201ENST00000373006 ZNF321PQ8N8H1 164 aa12.28□□□□□ -0.44
USP49-201ENST00000373006 RNF141Q8WVD5 230 aa12.28□□□□□ -0.44
USP49-201ENST00000373006 EDARADDQ8WWZ3 215 aa12.28□□□□□ -0.44
USP49-201ENST00000373006 PRRT1Q99946 306 aa12.28□□□□□ -0.44
USP49-201ENST00000373006 ABHD6Q9BV23 337 aa12.28□□□□□ -0.44
USP49-201ENST00000373006 ZFP57Q9NU63 452 aa12.28□□□□□ -0.44
USP49-201ENST00000373006 LRP12Q9Y561 859 aa12.28□□□□□ -0.44
USP49-201ENST00000373006 FANCMQ8IYD8 2048 aa12.28□□□□□ -0.44
USP49-201ENST00000373006 SNAPINO95295 136 aa12.27□□□□□ -0.44
USP49-201ENST00000373006 NUDT14O95848 222 aa12.27□□□□□ -0.44
USP49-201ENST00000373006 PMP2P02689 132 aa12.27□□□□□ -0.44
USP49-201ENST00000373006 APODP05090 189 aa12.27□□□□□ -0.44
USP49-201ENST00000373006 EN2P19622 333 aaPredicted RBP12.27□□□□□ -0.44
USP49-201ENST00000373006 TAF8Q7Z7C8 310 aa12.27□□□□□ -0.44
USP49-201ENST00000373006 KDM8Q8N371 416 aa12.27□□□□□ -0.44
USP49-201ENST00000373006 AVL9Q8NBF6 648 aa12.27□□□□□ -0.44
USP49-201ENST00000373006 MARCH1Q8TCQ1 289 aa12.27□□□□□ -0.44
USP49-201ENST00000373006 S100PBPQ96BU1 408 aa12.27□□□□□ -0.44
USP49-201ENST00000373006 CYYR1Q96J86 154 aa12.27□□□□□ -0.44
USP49-201ENST00000373006 CFHR5Q9BXR6 569 aa12.27□□□□□ -0.44
USP49-201ENST00000373006 SLCO5A1Q9H2Y9 848 aa12.27□□□□□ -0.44
USP49-201ENST00000373006 FREM3P0C091 2139 aa12.27□□□□□ -0.45
USP49-201ENST00000373006 LOC101059948A0A1B0GTJ6 334 aa12.27□□□□□ -0.45
USP49-201ENST00000373006 A0A1B0GV50 99 aa12.27□□□□□ -0.45
USP49-201ENST00000373006 A6NCN8 305 aa12.27□□□□□ -0.45
USP49-201ENST00000373006 MSGN1A6NI15 193 aa12.27□□□□□ -0.45
USP49-201ENST00000373006 EFSO43281 561 aa12.27□□□□□ -0.45
USP49-201ENST00000373006 CRHP06850 196 aa12.27□□□□□ -0.45
USP49-201ENST00000373006 CD79AP11912 226 aa12.27□□□□□ -0.45
USP49-201ENST00000373006 CTLA4P16410 223 aa12.27□□□□□ -0.45
USP49-201ENST00000373006 GNB3P16520 340 aa12.27□□□□□ -0.45
USP49-201ENST00000373006 ACKR1Q16570 336 aa12.27□□□□□ -0.45
USP49-201ENST00000373006 GFOD2Q3B7J2 385 aa12.27□□□□□ -0.45
USP49-201ENST00000373006 TEX30Q5JUR7 227 aa12.27□□□□□ -0.45
USP49-201ENST00000373006 ADAM5Q6NVV9 412 aa12.27□□□□□ -0.45
USP49-201ENST00000373006 PAQR4Q8N4S7 273 aaPredicted RBP12.27□□□□□ -0.45
USP49-201ENST00000373006 BMFQ96LC9 184 aa12.27□□□□□ -0.45
USP49-201ENST00000373006 WDR92Q96MX6 357 aa12.27□□□□□ -0.45
USP49-201ENST00000373006 RNF126Q9BV68 326 aa12.27□□□□□ -0.45
USP49-201ENST00000373006 FN3KRPQ9HA64 309 aa12.27□□□□□ -0.45
USP49-201ENST00000373006 PRTFDC1Q9NRG1 225 aa12.27□□□□□ -0.45
USP49-201ENST00000373006 H0YIZ8 118 aa12.26□□□□□ -0.45
USP49-201ENST00000373006 ZNF264O43296 627 aa12.26□□□□□ -0.45
USP49-201ENST00000373006 HOXB1P14653 301 aaPredicted RBP12.26□□□□□ -0.45
USP49-201ENST00000373006 CFPP27918 469 aa12.26□□□□□ -0.45
USP49-201ENST00000373006 PPICP45877 212 aa12.26□□□□□ -0.45
USP49-201ENST00000373006 RIDAP52758 137 aaKnown RBP12.26□□□□□ -0.45
USP49-201ENST00000373006 DEFA6Q01524 100 aa12.26□□□□□ -0.45
USP49-201ENST00000373006 PEA15Q15121 130 aa12.26□□□□□ -0.45
USP49-201ENST00000373006 EMC4Q5J8M3 183 aa12.26□□□□□ -0.45
USP49-201ENST00000373006 ZSCAN4Q8NAM6 433 aaPredicted RBP12.26□□□□□ -0.45
USP49-201ENST00000373006 ELSPBP1Q96BH3 223 aa12.26□□□□□ -0.45
USP49-201ENST00000373006 MEGF10Q96KG7 1140 aa12.26□□□□□ -0.45
USP49-201ENST00000373006 ADOQ96SZ5 270 aa12.26□□□□□ -0.45
USP49-201ENST00000373006 MRPS33Q9Y291 106 aaKnown RBP12.26□□□□□ -0.45
USP49-201ENST00000373006 A0A0J9YY10 115 aa12.26□□□□□ -0.45
USP49-201ENST00000373006 CDC14CA4D256 554 aa12.26□□□□□ -0.45
USP49-201ENST00000373006 SCDO00767 359 aa12.26□□□□□ -0.45
USP49-201ENST00000373006 PHYHO14832 338 aa12.26□□□□□ -0.45
USP49-201ENST00000373006 ADAP1O75689 374 aa12.26□□□□□ -0.45
USP49-201ENST00000373006 PI3P19957 117 aa12.26□□□□□ -0.45
USP49-201ENST00000373006 INSM1Q01101 510 aaPredicted RBP12.26□□□□□ -0.45
USP49-201ENST00000373006 MEF2DQ14814 521 aa12.26□□□□□ -0.45
USP49-201ENST00000373006 NFATC4Q14934 902 aa12.26□□□□□ -0.45
USP49-201ENST00000373006 WDSUB1Q8N9V3 476 aa12.26□□□□□ -0.45
USP49-201ENST00000373006 LIPHQ8WWY8 451 aa12.26□□□□□ -0.45
USP49-201ENST00000373006 TCEAL2Q9H3H9 227 aaPredicted RBP12.26□□□□□ -0.45
USP49-201ENST00000373006 UBQLN4Q9NRR5 601 aa12.26□□□□□ -0.45
USP49-201ENST00000373006 GDF2Q9UK05 429 aaPredicted RBP12.26□□□□□ -0.45
USP49-201ENST00000373006 CARHSP1Q9Y2V2 147 aaKnown RBP12.26□□□□□ -0.45
USP49-201ENST00000373006 RTTNQ86VV8 2226 aa12.26□□□□□ -0.45
USP49-201ENST00000373006 RAB27BO00194 218 aa12.26□□□□□ -0.45
USP49-201ENST00000373006 IFNA6P05013 189 aa12.26□□□□□ -0.45
USP49-201ENST00000373006 NME1P15531 152 aaKnown RBP12.26□□□□□ -0.45
USP49-201ENST00000373006 IGFBP3P17936 291 aaPredicted RBP12.26□□□□□ -0.45
USP49-201ENST00000373006 FDX2Q6P4F2 183 aa12.26□□□□□ -0.45
USP49-201ENST00000373006 RTL10Q7L3V2 364 aa12.26□□□□□ -0.45
USP49-201ENST00000373006 SLC29A4Q7RTT9 530 aa12.26□□□□□ -0.45
USP49-201ENST00000373006 LINC00346Q8IVM7 164 aa12.26□□□□□ -0.45
USP49-201ENST00000373006 RSC1A1Q92681 617 aa12.26□□□□□ -0.45
USP49-201ENST00000373006 CNTD2Q9H8S5 307 aa12.26□□□□□ -0.45
USP49-201ENST00000373006 CYTL1Q9NRR1 136 aa12.26□□□□□ -0.45
USP49-201ENST00000373006 LTBP2Q14767 1821 aa12.25□□□□□ -0.45
USP49-201ENST00000373006 PRSS37A4D1T9 235 aa12.25□□□□□ -0.45
USP49-201ENST00000373006 HCRTR2O43614 444 aa12.25□□□□□ -0.45
USP49-201ENST00000373006 IL2RAP01589 272 aa12.25□□□□□ -0.45
USP49-201ENST00000373006 CELA2BP08218 269 aaPredicted RBP12.25□□□□□ -0.45
USP49-201ENST00000373006 FAM157CP0CG43 387 aa12.25□□□□□ -0.45
USP49-201ENST00000373006 RNH1P13489 461 aaKnown RBP12.25□□□□□ -0.45
USP49-201ENST00000373006 HLA-GP17693 338 aa12.25□□□□□ -0.45
USP49-201ENST00000373006 CXCR1P25024 350 aa12.25□□□□□ -0.45
USP49-201ENST00000373006 ZP2Q05996 745 aa12.25□□□□□ -0.45
USP49-201ENST00000373006 SLC9A3R2Q15599 337 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms