RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 GPM6AP51674 278 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 OR52D1Q9H346 318 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 SSU72Q9NP77 194 aaKnown RBP8.92□□□□□ -0.98
CHD3-202ENST00000358181 SDR39U1Q9NRG7 319 aaPredicted RBP8.92□□□□□ -0.98
CHD3-202ENST00000358181 CLDN24A6NM45 220 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 WNT4P56705 351 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 TECRLQ5HYJ1 363 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 CLDN22Q8N7P3 220 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 GPR150Q8NGU9 434 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 BCL7CQ8WUZ0 217 aaPredicted RBP8.92□□□□□ -0.98
CHD3-202ENST00000358181 CGGBP1Q9UFW8 167 aaPredicted RBP8.92□□□□□ -0.98
CHD3-202ENST00000358181 KLF13Q9Y2Y9 288 aaPredicted RBP8.92□□□□□ -0.98
CHD3-202ENST00000358181 PPIL1Q9Y3C6 166 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 PHRF1Q9P1Y6 1649 aaKnown RBP8.92□□□□□ -0.98
CHD3-202ENST00000358181 TAF1P21675 1872 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 RFPL3O75679 317 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 FPR3P25089 353 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 HNRNPA3P51991 378 aaKnown RBP8.92□□□□□ -0.98
CHD3-202ENST00000358181 CLDN15P56746 228 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 OTPQ5XKR4 325 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 ZNF683Q8IZ20 524 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 RAB1BQ9H0U4 201 aa8.92□□□□□ -0.98
CHD3-202ENST00000358181 UBE2L5PA0A1B0GUS4 154 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 NPPAP01160 153 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 SNRPBP14678 240 aaKnown RBP8.91□□□□□ -0.98
CHD3-202ENST00000358181 IQCJQ1A5X6 159 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 OR13D1Q8NGV5 346 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 MYOZ1Q9NP98 299 aaPredicted RBP8.91□□□□□ -0.98
CHD3-202ENST00000358181 CTSFQ9UBX1 484 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 U3KQ87 197 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 PRSS44E7EML9 344 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 K7ESF4 209 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 CD82P27701 267 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 CD68P34810 354 aaPredicted RBP8.91□□□□□ -0.98
CHD3-202ENST00000358181 ARR3P36575 388 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 ACOT6Q3I5F7 207 aaPredicted RBP8.91□□□□□ -0.98
CHD3-202ENST00000358181 GTDC1Q4AE62 458 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 PARS2Q7L3T8 475 aaKnown RBP8.91□□□□□ -0.98
CHD3-202ENST00000358181 RASD2Q96D21 266 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 LGALS12Q96DT0 336 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 SLC22A13Q9Y226 551 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 CCL26Q9Y258 94 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 COA3Q9Y2R0 106 aaPredicted RBP8.91□□□□□ -0.98
CHD3-202ENST00000358181 ZNF281Q9Y2X9 895 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 OR51B4Q9Y5P0 310 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 P2RX6O15547 441 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 HCRTR1O43613 425 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 SELENOFO60613 162 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 ORM2P19652 201 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 TBXA2RP21731 343 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 HTR6P50406 440 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 CNN1P51911 297 aaKnown RBP8.91□□□□□ -0.98
CHD3-202ENST00000358181 GGTLC2Q14390 218 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 CEBPEQ15744 281 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 GPX7Q96SL4 187 aaPredicted RBP8.91□□□□□ -0.98
CHD3-202ENST00000358181 C1QTNF2Q9BXJ5 285 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 PRSS21Q9Y6M0 314 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 DUS4LO95620 317 aaKnown RBP8.91□□□□□ -0.98
CHD3-202ENST00000358181 ITGB7P26010 798 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 RAB38P57729 211 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 COL19A1Q14993 1142 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 C2CD4CQ8TF44 421 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 WDR61Q9GZS3 305 aaKnown RBP8.91□□□□□ -0.98
CHD3-202ENST00000358181 EXOSC3Q9NQT5 275 aaKnown RBP8.91□□□□□ -0.98
CHD3-202ENST00000358181 SLC22A7Q9Y694 548 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 CGB1A6NKQ9 187 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 HRO43593 1189 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 EIF1BO60739 113 aaKnown RBP8.91□□□□□ -0.98
CHD3-202ENST00000358181 CRISP2P16562 243 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 FOXA1P55317 472 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 C10orf62Q5T681 223 aaPredicted RBP8.91□□□□□ -0.98
CHD3-202ENST00000358181 ADAM5Q6NVV9 412 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 POM121L2Q96KW2 1035 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 TAAR6Q96RI8 345 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 RTN4RQ9BZR6 473 aa8.91□□□□□ -0.98
CHD3-202ENST00000358181 CSN3P07498 182 aa8.9□□□□□ -0.98
CHD3-202ENST00000358181 PAX5Q02548 391 aa8.9□□□□□ -0.98
CHD3-202ENST00000358181 TNXAQ16473 311 aa8.9□□□□□ -0.98
CHD3-202ENST00000358181 IAH1Q2TAA2 248 aaPredicted RBP8.9□□□□□ -0.98
CHD3-202ENST00000358181 CST9Q5W186 159 aa8.9□□□□□ -0.98
CHD3-202ENST00000358181 WDR74Q6RFH5 385 aaPredicted RBP8.9□□□□□ -0.98
CHD3-202ENST00000358181 YIPF5Q969M3 257 aa8.9□□□□□ -0.98
CHD3-202ENST00000358181 PSENENQ9NZ42 101 aa8.9□□□□□ -0.98
CHD3-202ENST00000358181 TRAV34A0A0B4J273 112 aa8.9□□□□□ -0.98
CHD3-202ENST00000358181 PRKNO60260 465 aaPredicted RBP8.9□□□□□ -0.98
CHD3-202ENST00000358181 DLX1P56177 255 aa8.9□□□□□ -0.98
CHD3-202ENST00000358181 ZNF252P-AS1Q0IIN9 211 aa8.9□□□□□ -0.98
CHD3-202ENST00000358181 ELFN2Q5R3F8 820 aa8.9□□□□□ -0.98
CHD3-202ENST00000358181 SLC15A4Q8N697 577 aa8.9□□□□□ -0.98
CHD3-202ENST00000358181 OR11G2Q8NGC1 345 aa8.9□□□□□ -0.98
CHD3-202ENST00000358181 OR10P1Q8NGE3 313 aa8.9□□□□□ -0.98
CHD3-202ENST00000358181 FBXO27Q8NI29 283 aa8.9□□□□□ -0.98
CHD3-202ENST00000358181 PAFAH1B2P68402 229 aa8.9□□□□□ -0.98
CHD3-202ENST00000358181 LRRC26Q2I0M4 334 aa8.9□□□□□ -0.98
CHD3-202ENST00000358181 VMA21Q3ZAQ7 101 aa8.9□□□□□ -0.98
CHD3-202ENST00000358181 FNDC8Q8TC99 324 aa8.9□□□□□ -0.98
CHD3-202ENST00000358181 PHOSPHO2Q8TCD6 241 aa8.9□□□□□ -0.98
CHD3-202ENST00000358181 ADAMTS16Q8TE57 1224 aa8.9□□□□□ -0.98
CHD3-202ENST00000358181 BTNL2Q9UIR0 455 aa8.9□□□□□ -0.98
CHD3-202ENST00000358181 IGHV3-43A0A0B4J1X8 118 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms