RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 LRP12Q9Y561 859 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 CACNG2Q9Y698 323 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 FRYQ5TBA9 3013 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 A0A1B0GVC2 190 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 A0A1W2PPL8 197 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 A6NIN4 97 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 SEC14L5O43304 696 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 LRP3O75074 770 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 EIF4EP06730 217 aaKnown RBP8.18□□□□□ -1.1
ATG4A-202ENST00000345734 CSF3P09919 207 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 IL7P13232 177 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 CDAP32320 146 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 CLDN17P56750 224 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 FOXO1Q12778 655 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 BAMBIQ13145 260 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 TSC22D1Q15714 1073 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 TAB1Q15750 504 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 PCK2Q16822 640 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 Q499Y3 187 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 THEM4Q5T1C6 240 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 PXDC1Q5TGL8 231 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 KCTD18Q6PI47 426 aaPredicted RBP8.18□□□□□ -1.1
ATG4A-202ENST00000345734 LINC00696Q6ZRV3 163 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 GLB1L2Q8IW92 636 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 ZNF676Q8N7Q3 588 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 OR5H6Q8NGV6 325 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 TRMT10AQ8TBZ6 339 aaKnown RBP8.18□□□□□ -1.1
ATG4A-202ENST00000345734 ST7LQ8TDW4 575 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 MCHR2Q969V1 340 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 DACT3Q96B18 629 aaPredicted RBP8.18□□□□□ -1.1
ATG4A-202ENST00000345734 EMC7Q9NPA0 242 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 KLHL9Q9P2J3 617 aa8.18□□□□□ -1.1
ATG4A-202ENST00000345734 TRBV5-5A0A0J9YX44 114 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 LOC102725191A0A1B0GVB3 256 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 A0A1W2PQ09 198 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 TMEM212A6NML5 194 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 ZNF726A6NNF4 738 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 DOK2O60496 412 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 WDPCPO95876 746 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 CNR1P21554 472 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 LAP3P28838 519 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 RFC3P40938 356 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 STARP49675 285 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 RIDAP52758 137 aaKnown RBP8.17□□□□□ -1.1
ATG4A-202ENST00000345734 IL18Q14116 193 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 TBRG1Q3YBR2 411 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 Q3ZCU0 254 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 TEX30Q5JUR7 227 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 ABHD17BQ5VST6 288 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 RSBN1Q5VWQ0 802 aaPredicted RBP8.17□□□□□ -1.1
ATG4A-202ENST00000345734 SLC25A47Q6Q0C1 308 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 GDPD3Q7L5L3 318 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 UBQLNLQ8IYU4 475 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 SAMD12Q8N8I0 201 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 HAVCR2Q8TDQ0 301 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 ZNF385AQ96PM9 386 aaKnown RBP8.17□□□□□ -1.1
ATG4A-202ENST00000345734 KCNJ15Q99712 375 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 COMMD4Q9H0A8 199 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 ZCCHC4Q9H5U6 513 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 PPP1R3EQ9H7J1 279 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 SEC61A2Q9H9S3 476 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 ZFP64Q9NPA5 681 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 ZC4H2Q9NQZ6 224 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 TEKT2Q9UIF3 430 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 DUSP13Q9UII6 198 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 CLEC4AQ9UMR7 237 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 KLF2Q9Y5W3 355 aaPredicted RBP8.17□□□□□ -1.1
ATG4A-202ENST00000345734 CEP250Q9BV73 2442 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 SPENQ96T58 3664 aaKnown RBP8.17□□□□□ -1.1
ATG4A-202ENST00000345734 HSPB2A8KAH6 182 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 TOR1AO14656 332 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 EIF1BO60739 113 aaKnown RBP8.17□□□□□ -1.1
ATG4A-202ENST00000345734 SLC19A2O60779 497 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 AQP8O94778 261 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 HRGP04196 525 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 QDPRP09417 244 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 GDF1P27539 372 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 SUCLG1P53597 346 aaKnown RBP8.17□□□□□ -1.1
ATG4A-202ENST00000345734 CSNK2A1P68400 391 aaPredicted RBP8.17□□□□□ -1.1
ATG4A-202ENST00000345734 RASGEF1BQ0VAM2 473 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 AIMP2Q13155 320 aaKnown RBP8.17□□□□□ -1.1
ATG4A-202ENST00000345734 SRSF6Q13247 344 aaKnown RBP8.17□□□□□ -1.1
ATG4A-202ENST00000345734 OR1C1Q15619 314 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 HSPB2Q16082 182 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 HIST3H3Q16695 136 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 PHYHD1Q5SRE7 291 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 HES5Q5TA89 166 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 CREB3L2Q70SY1 520 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 GGNQ86UU5 652 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 CATSPERDQ86XM0 798 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 ZNF433Q8N7K0 673 aaPredicted RBP8.17□□□□□ -1.1
ATG4A-202ENST00000345734 GDPD1Q8N9F7 314 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 IL17RDQ8NFM7 739 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 OR10H5Q8NGA6 315 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 OR4M1Q8NGD0 313 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 LRRC20Q8TCA0 184 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 PHYHIPQ92561 330 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 SFXN2Q96NB2 322 aa8.17□□□□□ -1.1
ATG4A-202ENST00000345734 UTP23Q9BRU9 249 aaKnown RBP8.17□□□□□ -1.1
ATG4A-202ENST00000345734 CENPMQ9NSP4 180 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms