RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 MARCH1Q8TCQ1 289 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 DEFB126Q9BYW3 111 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 TANC1Q9C0D5 1861 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 ADAM19Q9H013 955 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 RAB9BQ9NP90 201 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 RYDENQ9NUL5 291 aaKnown RBP4.34□□□□□ -1.71
CSMD3-203ENST00000343508 NTMQ9P121 344 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 A0A1W2PPV4 95 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 MFNGO00587 321 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 HPP00738 406 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 GNB3P16520 340 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 RFC3P40938 356 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 RANP62826 216 aaKnown RBP4.34□□□□□ -1.71
CSMD3-203ENST00000343508 HYAL4Q2M3T9 481 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 DEFB110Q30KQ9 67 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 ZNF684Q5T5D7 378 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 PLCXD3Q63HM9 321 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 ZSCAN4Q8NAM6 433 aaPredicted RBP4.34□□□□□ -1.71
CSMD3-203ENST00000343508 OR52N5Q8NH56 324 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 ANKRD9Q96BM1 317 aaPredicted RBP4.34□□□□□ -1.71
CSMD3-203ENST00000343508 TM7SF3Q9NS93 570 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 TMEM100Q9NV29 134 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 SUSD2Q9UGT4 822 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 COA3Q9Y2R0 106 aaPredicted RBP4.34□□□□□ -1.71
CSMD3-203ENST00000343508 DDAH2O95865 285 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 PTHLHP12272 177 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 APEHP13798 732 aaKnown RBP4.34□□□□□ -1.71
CSMD3-203ENST00000343508 ALOX5APP20292 161 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 IGSF11Q5DX21 431 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 GPR137CQ8N3F9 429 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 METTL15P1P0C7V9 234 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 SPP1P10451 314 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 CCL5P13501 91 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 NQO2P16083 231 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 DRD1P21728 446 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 APOBEC1P41238 236 aaKnown RBP4.34□□□□□ -1.71
CSMD3-203ENST00000343508 UBXN2BQ14CS0 331 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 LRRC18Q8N456 261 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 NT5CQ8TCD5 201 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 NUDCD2Q8WVJ2 157 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 LOC107986453A0A1B0GWG9 222 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 ANKRD61A6NGH8 418 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 CDC42EP2O14613 210 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 LRP3O75074 770 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 MTCP1P56278 107 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 RPL18Q07020 188 aaKnown RBP4.34□□□□□ -1.71
CSMD3-203ENST00000343508 PDZD11Q5EBL8 140 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 FAM57BQ71RH2 274 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 SLC25A42Q86VD7 318 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 GJC3Q8NFK1 279 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 BORCS7Q96B45 105 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 SGCZQ96LD1 299 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 A0A0B4J2E0 115 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 A0A1B0GX12 115 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 EPHA1P21709 976 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 OMGP23515 440 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 ERV3-1Q14264 604 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 IQCJQ1A5X6 159 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 OR2T2Q6IF00 324 aa4.34□□□□□ -1.71
CSMD3-203ENST00000343508 HCRTR1O43613 425 aa4.34□□□□□ -1.72
CSMD3-203ENST00000343508 TRAPPC6AO75865 159 aa4.34□□□□□ -1.72
CSMD3-203ENST00000343508 GUCA2AQ02747 115 aa4.34□□□□□ -1.72
CSMD3-203ENST00000343508 PHF19Q5T6S3 580 aa4.34□□□□□ -1.72
CSMD3-203ENST00000343508 MRM1Q6IN84 353 aaKnown RBP4.34□□□□□ -1.72
CSMD3-203ENST00000343508 PRSS54Q6PEW0 395 aa4.34□□□□□ -1.72
CSMD3-203ENST00000343508 UBAC2Q8NBM4 344 aa4.34□□□□□ -1.72
CSMD3-203ENST00000343508 KLF8O95600 359 aaPredicted RBP4.34□□□□□ -1.72
CSMD3-203ENST00000343508 SEMA4FO95754 770 aa4.34□□□□□ -1.72
CSMD3-203ENST00000343508 CEBPBP17676 345 aa4.34□□□□□ -1.72
CSMD3-203ENST00000343508 NAAAQ02083 359 aa4.34□□□□□ -1.72
CSMD3-203ENST00000343508 ADIRFQ15847 76 aa4.34□□□□□ -1.72
CSMD3-203ENST00000343508 PRICKLE4Q2TBC4 344 aa4.34□□□□□ -1.72
CSMD3-203ENST00000343508 TMPPEQ6ZT21 453 aa4.34□□□□□ -1.72
CSMD3-203ENST00000343508 IL22RA1Q8N6P7 574 aa4.34□□□□□ -1.72
CSMD3-203ENST00000343508 OR4S1Q8NGB4 309 aa4.34□□□□□ -1.72
CSMD3-203ENST00000343508 OR2A1Q8NGT9 310 aa4.34□□□□□ -1.72
CSMD3-203ENST00000343508 NPRL2Q8WTW4 380 aa4.34□□□□□ -1.72
CSMD3-203ENST00000343508 OIT3Q8WWZ8 545 aa4.34□□□□□ -1.72
CSMD3-203ENST00000343508 RASL12Q9NYN1 266 aa4.34□□□□□ -1.72
CSMD3-203ENST00000343508 ITGB8P26012 769 aa4.34□□□□□ -1.72
CSMD3-203ENST00000343508 VIPR2P41587 438 aa4.34□□□□□ -1.72
CSMD3-203ENST00000343508 EEF1A2Q05639 463 aaKnown RBP4.34□□□□□ -1.72
CSMD3-203ENST00000343508 PPP1R1AQ13522 171 aa4.34□□□□□ -1.72
CSMD3-203ENST00000343508 GUK1Q16774 197 aa4.34□□□□□ -1.72
CSMD3-203ENST00000343508 MRPL21Q7Z2W9 205 aaKnown RBP4.34□□□□□ -1.72
CSMD3-203ENST00000343508 FAM185AQ8N0U4 392 aa4.34□□□□□ -1.72
CSMD3-203ENST00000343508 ZNF610Q8N9Z0 462 aa4.34□□□□□ -1.72
CSMD3-203ENST00000343508 PSMF1Q92530 271 aa4.34□□□□□ -1.72
CSMD3-203ENST00000343508 NTNG2Q96CW9 530 aa4.34□□□□□ -1.72
CSMD3-203ENST00000343508 TNFSF18Q9UNG2 199 aa4.34□□□□□ -1.72
CSMD3-203ENST00000343508 CCL26Q9Y258 94 aa4.34□□□□□ -1.72
CSMD3-203ENST00000343508 MRPS17Q9Y2R5 130 aaKnown RBP4.34□□□□□ -1.72
CSMD3-203ENST00000343508 KCNE3Q9Y6H6 103 aa4.34□□□□□ -1.72
CSMD3-203ENST00000343508 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 CDC14CA4D256 554 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 TNFSF12O43508 249 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 DBHP09172 617 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 FGF7P21781 194 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 PPIAP62937 165 aaKnown RBP4.33□□□□□ -1.72
CSMD3-203ENST00000343508 PNRC1Q12796 327 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms