RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 BTNL2Q9UIR0 455 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 CHST2Q9Y4C5 530 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 A0A1W2PPE2 198 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 RNGTTO60942 597 aaKnown RBP5.67□□□□□ -1.5
VCAN-203ENST00000343200 ACTL6AO96019 429 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 GUSBP08236 651 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 CTXN2P0C2S0 81 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 T-ENOLP0DO92 83 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 AGFG1P52594 562 aaKnown RBP5.67□□□□□ -1.5
VCAN-203ENST00000343200 GALNT2Q10471 571 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 IKZF1Q13422 519 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 FAM24BQ8N5W8 94 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 CYB561A3Q8NBI2 242 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 LKAAEAR1Q8TD35 194 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 NSUN5Q96P11 429 aaKnown RBP5.67□□□□□ -1.5
VCAN-203ENST00000343200 UTP23Q9BRU9 249 aaKnown RBP5.67□□□□□ -1.5
VCAN-203ENST00000343200 WDR76Q9H967 626 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 TRAPPC4Q9Y296 219 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 TMEM269A0A1B0GVZ9 245 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 NPIPB15A6NHN6 443 aaPredicted RBP5.67□□□□□ -1.5
VCAN-203ENST00000343200 M0QYG6 137 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 B4GALT2O60909 372 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 PIPP12273 146 aaPredicted RBP5.67□□□□□ -1.5
VCAN-203ENST00000343200 SOWAHCQ53LP3 525 aaPredicted RBP5.67□□□□□ -1.5
VCAN-203ENST00000343200 PABPC1L2AQ5JQF8 200 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 COMMD6Q7Z4G1 85 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 CSNK1A1LQ8N752 337 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 OR52I1Q8NGK6 324 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 ABHD4Q8TB40 342 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 WDR89Q96FK6 387 aaPredicted RBP5.67□□□□□ -1.5
VCAN-203ENST00000343200 CDCA4Q9BXL8 241 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 DUSP21Q9H596 190 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 ACER3Q9NUN7 267 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 FLVCR1Q9Y5Y0 555 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 ZC3H12DA2A288 527 aaKnown RBP5.67□□□□□ -1.5
VCAN-203ENST00000343200 PRKRAO75569 313 aaKnown RBP5.67□□□□□ -1.5
VCAN-203ENST00000343200 ZNF28P17035 718 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 RAG2P55895 527 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 JOSD1Q15040 202 aaPredicted RBP5.67□□□□□ -1.5
VCAN-203ENST00000343200 ZNF468Q5VIY5 522 aaPredicted RBP5.67□□□□□ -1.5
VCAN-203ENST00000343200 NXNL2Q5VZ03 156 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 C11orf87Q6NUJ2 197 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 LCTLQ6UWM7 567 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 ZNF765Q7L2R6 523 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 PRSS3P2Q8NHM4 247 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 DLL4Q9NR61 685 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 TRBV4-1A0A0J9YWV2 114 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 OR2W5A6NFC9 320 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 DBHP09172 617 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 SRP14P37108 136 aaKnown RBP5.67□□□□□ -1.5
VCAN-203ENST00000343200 MLF1P58340 268 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 PAX5Q02548 391 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 C19orf57Q0VDD7 668 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 PJVKQ0ZLH3 352 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 TCEAL1Q15170 157 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 SPRED3Q2MJR0 410 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 RTN4IP1Q8WWV3 396 aaPredicted RBP5.67□□□□□ -1.5
VCAN-203ENST00000343200 EMG1Q92979 244 aaKnown RBP5.67□□□□□ -1.5
VCAN-203ENST00000343200 ACY3Q96HD9 319 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 ST6GALNAC4Q9H4F1 302 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 KCNK12Q9HB15 430 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 SIX2Q9NPC8 291 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 PLSCR3Q9NRY6 295 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 SERTAD3Q9UJW9 196 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 EMC9Q9Y3B6 208 aa5.67□□□□□ -1.5
VCAN-203ENST00000343200 COL14A1Q05707 1796 aaKnown RBP5.66□□□□□ -1.5
VCAN-203ENST00000343200 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.66□□□□□ -1.5
VCAN-203ENST00000343200 OR4C46A6NHA9 309 aa5.66□□□□□ -1.5
VCAN-203ENST00000343200 SERPINE3A8MV23 424 aa5.66□□□□□ -1.5
VCAN-203ENST00000343200 HSPB6O14558 160 aa5.66□□□□□ -1.5
VCAN-203ENST00000343200 SPINT2O43291 252 aa5.66□□□□□ -1.5
VCAN-203ENST00000343200 VNN1O95497 513 aa5.66□□□□□ -1.5
VCAN-203ENST00000343200 DUS4LO95620 317 aaKnown RBP5.66□□□□□ -1.5
VCAN-203ENST00000343200 PTGFRP43088 359 aa5.66□□□□□ -1.5
VCAN-203ENST00000343200 NPBWR2P48146 333 aa5.66□□□□□ -1.5
VCAN-203ENST00000343200 TMEM201Q5SNT2 666 aa5.66□□□□□ -1.5
VCAN-203ENST00000343200 ZNF385CQ66K41 422 aaPredicted RBP5.66□□□□□ -1.5
VCAN-203ENST00000343200 DPPA3Q6W0C5 159 aa5.66□□□□□ -1.5
VCAN-203ENST00000343200 PTP4A1Q93096 173 aa5.66□□□□□ -1.5
VCAN-203ENST00000343200 ESAMQ96AP7 390 aa5.66□□□□□ -1.5
VCAN-203ENST00000343200 SLC17A9Q9BYT1 436 aa5.66□□□□□ -1.5
VCAN-203ENST00000343200 MRPL37Q9BZE1 423 aaKnown RBP5.66□□□□□ -1.5
VCAN-203ENST00000343200 UQCC1Q9NVA1 299 aa5.66□□□□□ -1.5
VCAN-203ENST00000343200 MSRAQ9UJ68 235 aa5.66□□□□□ -1.5
VCAN-203ENST00000343200 SLC22A13Q9Y226 551 aa5.66□□□□□ -1.5
VCAN-203ENST00000343200 PAPLNO95428 1278 aa5.66□□□□□ -1.5
VCAN-203ENST00000343200 CST4P01036 141 aa5.66□□□□□ -1.5
VCAN-203ENST00000343200 OR4Q2P0C623 313 aa5.66□□□□□ -1.5
VCAN-203ENST00000343200 SMIM10L2AP0DMW4 78 aa5.66□□□□□ -1.5
VCAN-203ENST00000343200 SMIM10L2BP0DMW5 78 aa5.66□□□□□ -1.5
VCAN-203ENST00000343200 PDE7AQ13946 482 aa5.66□□□□□ -1.5
VCAN-203ENST00000343200 RNF111Q6ZNA4 994 aa5.66□□□□□ -1.5
VCAN-203ENST00000343200 SPRED1Q7Z699 444 aa5.66□□□□□ -1.5
VCAN-203ENST00000343200 MDGA1Q8NFP4 955 aa5.66□□□□□ -1.5
VCAN-203ENST00000343200 OR1N2Q8NGR9 330 aa5.66□□□□□ -1.5
VCAN-203ENST00000343200 HGDQ93099 445 aa5.66□□□□□ -1.5
VCAN-203ENST00000343200 FAM71F1Q96KD3 344 aaPredicted RBP5.66□□□□□ -1.5
VCAN-203ENST00000343200 SMDT1Q9H4I9 107 aa5.66□□□□□ -1.5
VCAN-203ENST00000343200 IKZF5Q9H5V7 419 aa5.66□□□□□ -1.5
VCAN-203ENST00000343200 DEC1Q9P2X7 70 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms