RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 CD2P06729 351 aa13.13□□□□□ -0.31
PBX3-201ENST00000342287 ANXA2P07355 339 aaKnown RBP13.13□□□□□ -0.31
PBX3-201ENST00000342287 CD8BP10966 210 aa13.13□□□□□ -0.31
PBX3-201ENST00000342287 PTGDSP41222 190 aa13.13□□□□□ -0.31
PBX3-201ENST00000342287 NBL1P41271 181 aa13.13□□□□□ -0.31
PBX3-201ENST00000342287 RAG2P55895 527 aa13.13□□□□□ -0.31
PBX3-201ENST00000342287 SEZ6L2Q6UXD5 910 aa13.13□□□□□ -0.31
PBX3-201ENST00000342287 ZNF561Q8N587 486 aa13.13□□□□□ -0.31
PBX3-201ENST00000342287 ZNF248Q8NDW4 579 aa13.13□□□□□ -0.31
PBX3-201ENST00000342287 BBS1Q8NFJ9 593 aa13.13□□□□□ -0.31
PBX3-201ENST00000342287 FAM117AQ9C073 453 aa13.13□□□□□ -0.31
PBX3-201ENST00000342287 TMEM231Q9H6L2 316 aa13.13□□□□□ -0.31
PBX3-201ENST00000342287 RYDENQ9NUL5 291 aaKnown RBP13.13□□□□□ -0.31
PBX3-201ENST00000342287 CHRNA9Q9UGM1 479 aa13.13□□□□□ -0.31
PBX3-201ENST00000342287 HIF3AQ9Y2N7 669 aa13.13□□□□□ -0.31
PBX3-201ENST00000342287 SF3B6Q9Y3B4 125 aaKnown RBP13.13□□□□□ -0.31
PBX3-201ENST00000342287 WIF1Q9Y5W5 379 aa13.13□□□□□ -0.31
PBX3-201ENST00000342287 TRAV36DV7A0A075B6V5 113 aa13.13□□□□□ -0.31
PBX3-201ENST00000342287 IGLV3-32A0A0A0MS00 114 aa13.13□□□□□ -0.31
PBX3-201ENST00000342287 MCIDASD6RGH6 385 aa13.13□□□□□ -0.31
PBX3-201ENST00000342287 BLOC1S5-TXNDC5H3BN57 136 aa13.13□□□□□ -0.31
PBX3-201ENST00000342287 AQP8O94778 261 aa13.13□□□□□ -0.31
PBX3-201ENST00000342287 ASAH2BP0C7U1 165 aa13.13□□□□□ -0.31
PBX3-201ENST00000342287 FOLR2P14207 255 aa13.13□□□□□ -0.31
PBX3-201ENST00000342287 DLSTP36957 453 aa13.13□□□□□ -0.31
PBX3-201ENST00000342287 RAD52P43351 418 aa13.13□□□□□ -0.31
PBX3-201ENST00000342287 SSR4P51571 173 aa13.13□□□□□ -0.31
PBX3-201ENST00000342287 DGCR2P98153 550 aa13.13□□□□□ -0.31
PBX3-201ENST00000342287 LTBQ06643 244 aa13.13□□□□□ -0.31
PBX3-201ENST00000342287 CLEC9AQ6UXN8 241 aa13.13□□□□□ -0.31
PBX3-201ENST00000342287 LRRC28Q86X40 367 aaPredicted RBP13.13□□□□□ -0.31
PBX3-201ENST00000342287 DND1Q8IYX4 353 aaKnown RBP13.13□□□□□ -0.31
PBX3-201ENST00000342287 GINS4Q9BRT9 223 aa13.13□□□□□ -0.31
PBX3-201ENST00000342287 MFFQ9GZY8 342 aa13.13□□□□□ -0.31
PBX3-201ENST00000342287 FKRPQ9H9S5 495 aa13.13□□□□□ -0.31
PBX3-201ENST00000342287 FBXL4Q9UKA2 621 aa13.13□□□□□ -0.31
PBX3-201ENST00000342287 IER3IP1Q9Y5U9 82 aa13.13□□□□□ -0.31
PBX3-201ENST00000342287 CHCHD2Q9Y6H1 151 aaPredicted RBP13.13□□□□□ -0.31
PBX3-201ENST00000342287 OTOGLQ3ZCN5 2332 aa13.12□□□□□ -0.31
PBX3-201ENST00000342287 A8MVM7 634 aa13.12□□□□□ -0.31
PBX3-201ENST00000342287 RAB3DO95716 219 aa13.12□□□□□ -0.31
PBX3-201ENST00000342287 FTH1P19P0C7X4 201 aa13.12□□□□□ -0.31
PBX3-201ENST00000342287 MLF1P58340 268 aa13.12□□□□□ -0.31
PBX3-201ENST00000342287 MEPCEQ7L2J0 689 aaKnown RBP13.12□□□□□ -0.31
PBX3-201ENST00000342287 PRDM13Q9H4Q3 707 aa13.12□□□□□ -0.31
PBX3-201ENST00000342287 TREM1Q9NP99 234 aa13.12□□□□□ -0.31
PBX3-201ENST00000342287 NRIP3Q9NQ35 241 aa13.12□□□□□ -0.31
PBX3-201ENST00000342287 FAM212BQ9NTI7 297 aaPredicted RBP13.12□□□□□ -0.31
PBX3-201ENST00000342287 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.12□□□□□ -0.31
PBX3-201ENST00000342287 TMEM72A0PK05 275 aa13.12□□□□□ -0.31
PBX3-201ENST00000342287 ARPC1BO15143 372 aaKnown RBP13.12□□□□□ -0.31
PBX3-201ENST00000342287 ARPC3O15145 178 aa13.12□□□□□ -0.31
PBX3-201ENST00000342287 FARS2O95363 451 aaKnown RBP13.12□□□□□ -0.31
PBX3-201ENST00000342287 HEXAP06865 529 aa13.12□□□□□ -0.31
PBX3-201ENST00000342287 BDKRB2P30411 391 aa13.12□□□□□ -0.31
PBX3-201ENST00000342287 NUTF2P61970 127 aaKnown RBP13.12□□□□□ -0.31
PBX3-201ENST00000342287 UQCC3Q6UW78 93 aa13.12□□□□□ -0.31
PBX3-201ENST00000342287 CPNE2Q96FN4 548 aaPredicted RBP13.12□□□□□ -0.31
PBX3-201ENST00000342287 GPX7Q96SL4 187 aaPredicted RBP13.12□□□□□ -0.31
PBX3-201ENST00000342287 MED20Q9H944 212 aa13.12□□□□□ -0.31
PBX3-201ENST00000342287 P4HTMQ9NXG6 502 aa13.12□□□□□ -0.31
PBX3-201ENST00000342287 ZNF705EA8MWA4 302 aaPredicted RBP13.11□□□□□ -0.31
PBX3-201ENST00000342287 PPIHO43447 177 aaKnown RBP13.11□□□□□ -0.31
PBX3-201ENST00000342287 WISP1O95388 367 aa13.11□□□□□ -0.31
PBX3-201ENST00000342287 MT-ATP6P00846 226 aa13.11□□□□□ -0.31
PBX3-201ENST00000342287 RAB4AP20338 218 aa13.11□□□□□ -0.31
PBX3-201ENST00000342287 AQP2P41181 271 aa13.11□□□□□ -0.31
PBX3-201ENST00000342287 APOBEC1P41238 236 aaKnown RBP13.11□□□□□ -0.31
PBX3-201ENST00000342287 DLX5P56178 289 aa13.11□□□□□ -0.31
PBX3-201ENST00000342287 WNT4P56705 351 aa13.11□□□□□ -0.31
PBX3-201ENST00000342287 SRSF3P84103 164 aaKnown RBP13.11□□□□□ -0.31
PBX3-201ENST00000342287 OR8G1Q15617 311 aa13.11□□□□□ -0.31
PBX3-201ENST00000342287 GXYLT1Q4G148 440 aa13.11□□□□□ -0.31
PBX3-201ENST00000342287 NIPAL3Q6P499 406 aa13.11□□□□□ -0.31
PBX3-201ENST00000342287 MOB3CQ70IA8 216 aa13.11□□□□□ -0.31
PBX3-201ENST00000342287 TMEM156Q8N614 296 aa13.11□□□□□ -0.31
PBX3-201ENST00000342287 RNF122Q9H9V4 155 aa13.11□□□□□ -0.31
PBX3-201ENST00000342287 EXOGQ9Y2C4 368 aaKnown RBP13.11□□□□□ -0.31
PBX3-201ENST00000342287 PCNX2A6NKB5 2137 aa13.11□□□□□ -0.31
PBX3-201ENST00000342287 SPAARA0A1B0GVQ0 90 aa13.11□□□□□ -0.31
PBX3-201ENST00000342287 ZC3H12DA2A288 527 aaKnown RBP13.11□□□□□ -0.31
PBX3-201ENST00000342287 OR2M5A3KFT3 312 aa13.11□□□□□ -0.31
PBX3-201ENST00000342287 RFPL4AA6NLU0 287 aa13.11□□□□□ -0.31
PBX3-201ENST00000342287 HMSDA8MTL9 139 aa13.11□□□□□ -0.31
PBX3-201ENST00000342287 RFPL4AL1F8VTS6 287 aa13.11□□□□□ -0.31
PBX3-201ENST00000342287 MASP2O00187 686 aa13.11□□□□□ -0.31
PBX3-201ENST00000342287 NPIPB7O75200 414 aa13.11□□□□□ -0.31
PBX3-201ENST00000342287 SNAPC5O75971 98 aa13.11□□□□□ -0.31
PBX3-201ENST00000342287 IGHV2-5P01817 119 aa13.11□□□□□ -0.31
PBX3-201ENST00000342287 HIST1H1CP16403 213 aaKnown RBP13.11□□□□□ -0.31
PBX3-201ENST00000342287 ABOP16442 354 aa13.11□□□□□ -0.31
PBX3-201ENST00000342287 GABRA5P31644 462 aa13.11□□□□□ -0.31
PBX3-201ENST00000342287 ATP6V1E1P36543 226 aa13.11□□□□□ -0.31
PBX3-201ENST00000342287 AKR1C3P42330 323 aa13.11□□□□□ -0.31
PBX3-201ENST00000342287 ZNF41P51814 821 aaPredicted RBP13.11□□□□□ -0.31
PBX3-201ENST00000342287 CRMP1Q14194 572 aa13.11□□□□□ -0.31
PBX3-201ENST00000342287 TGIF1Q15583 401 aa13.11□□□□□ -0.31
PBX3-201ENST00000342287 ALG10Q5BKT4 473 aa13.11□□□□□ -0.31
PBX3-201ENST00000342287 RAB12Q6IQ22 244 aa13.11□□□□□ -0.31
PBX3-201ENST00000342287 FAM98AQ8NCA5 519 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms