RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 CBR1P16152 277 aa11.66□□□□□ -0.54
COL18A1-201ENST00000342220 CTLA4P16410 223 aa11.66□□□□□ -0.54
COL18A1-201ENST00000342220 ZNF823P16415 610 aa11.66□□□□□ -0.54
COL18A1-201ENST00000342220 CASRP41180 1078 aa11.66□□□□□ -0.54
COL18A1-201ENST00000342220 PRSS12P56730 875 aa11.66□□□□□ -0.54
COL18A1-201ENST00000342220 CLDN17P56750 224 aa11.66□□□□□ -0.54
COL18A1-201ENST00000342220 ACTC1P68032 377 aa11.66□□□□□ -0.54
COL18A1-201ENST00000342220 ACTA1P68133 377 aa11.66□□□□□ -0.54
COL18A1-201ENST00000342220 FGL1Q08830 312 aa11.66□□□□□ -0.54
COL18A1-201ENST00000342220 TSC22D1Q15714 1073 aa11.66□□□□□ -0.54
COL18A1-201ENST00000342220 ST3GAL2Q16842 350 aa11.66□□□□□ -0.54
COL18A1-201ENST00000342220 RSPO4Q2I0M5 234 aaPredicted RBP11.66□□□□□ -0.54
COL18A1-201ENST00000342220 DCAF10Q5QP82 559 aa11.66□□□□□ -0.54
COL18A1-201ENST00000342220 RBM24Q9BX46 236 aaKnown RBP11.66□□□□□ -0.54
COL18A1-201ENST00000342220 HAO2Q9NYQ3 351 aa11.66□□□□□ -0.54
COL18A1-201ENST00000342220 NKIRAS2Q9NYR9 191 aa11.66□□□□□ -0.54
COL18A1-201ENST00000342220 MYEF2Q9P2K5 600 aaKnown RBP11.66□□□□□ -0.54
COL18A1-201ENST00000342220 PRR14LQ5THK1 2151 aa11.66□□□□□ -0.54
COL18A1-201ENST00000342220 OR2M5A3KFT3 312 aa11.66□□□□□ -0.54
COL18A1-201ENST00000342220 A8MXK9 166 aa11.66□□□□□ -0.54
COL18A1-201ENST00000342220 ZNF593O00488 134 aaPredicted RBP11.66□□□□□ -0.54
COL18A1-201ENST00000342220 OR2T1O43869 369 aa11.66□□□□□ -0.54
COL18A1-201ENST00000342220 CELA3AP09093 270 aa11.66□□□□□ -0.54
COL18A1-201ENST00000342220 MMP15P51511 669 aa11.66□□□□□ -0.54
COL18A1-201ENST00000342220 CLRN1P58418 232 aa11.66□□□□□ -0.54
COL18A1-201ENST00000342220 TSPAN5P62079 268 aa11.66□□□□□ -0.54
COL18A1-201ENST00000342220 PMP22Q01453 160 aa11.66□□□□□ -0.54
COL18A1-201ENST00000342220 OPCMLQ14982 345 aa11.66□□□□□ -0.54
COL18A1-201ENST00000342220 CDK5R1Q15078 307 aa11.66□□□□□ -0.54
COL18A1-201ENST00000342220 RGS7BPQ6MZT1 257 aaPredicted RBP11.66□□□□□ -0.54
COL18A1-201ENST00000342220 FAM220AQ7Z4H9 259 aa11.66□□□□□ -0.54
COL18A1-201ENST00000342220 TEX19Q8NA77 164 aa11.66□□□□□ -0.54
COL18A1-201ENST00000342220 NAXEQ8NCW5 288 aa11.66□□□□□ -0.54
COL18A1-201ENST00000342220 ZNF671Q8TAW3 534 aa11.66□□□□□ -0.54
COL18A1-201ENST00000342220 HAVCR2Q8TDQ0 301 aa11.66□□□□□ -0.54
COL18A1-201ENST00000342220 SFT2D1Q8WV19 159 aa11.66□□□□□ -0.54
COL18A1-201ENST00000342220 HOXB13Q92826 284 aaPredicted RBP11.66□□□□□ -0.54
COL18A1-201ENST00000342220 SIGLEC12Q96PQ1 595 aa11.66□□□□□ -0.54
COL18A1-201ENST00000342220 DERL3Q96Q80 235 aa11.66□□□□□ -0.54
COL18A1-201ENST00000342220 OR2M2Q96R28 347 aa11.66□□□□□ -0.54
COL18A1-201ENST00000342220 UTP23Q9BRU9 249 aaKnown RBP11.66□□□□□ -0.54
COL18A1-201ENST00000342220 MFRPQ9BY79 579 aa11.66□□□□□ -0.54
COL18A1-201ENST00000342220 MIOXQ9UGB7 285 aa11.66□□□□□ -0.54
COL18A1-201ENST00000342220 GPR160Q9UJ42 338 aa11.66□□□□□ -0.54
COL18A1-201ENST00000342220 CHCHD2Q9Y6H1 151 aaPredicted RBP11.66□□□□□ -0.54
COL18A1-201ENST00000342220 TRAV1-2A0A0B4J238 106 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 PQLC2LA1A4F0 135 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 ANKUB1A6NFN9 424 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 PRR33A8MZF0 331 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 KRT33AO76009 404 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 TGM6O95932 706 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 H2AFB2P0C5Z0 115 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 SDHAP31040 664 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 CD96P40200 585 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 DIO1P49895 249 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 RPS11P62280 158 aaKnown RBP eCLIP11.65□□□□□ -0.54
COL18A1-201ENST00000342220 GSG1Q2KHT4 349 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 PABPC1L2AQ5JQF8 200 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 CD276Q5ZPR3 534 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 ZNF676Q8N7Q3 588 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 BVESQ8NE79 360 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 OR10H5Q8NGA6 315 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 LGALS14Q8TCE9 139 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 SMIM19Q96E16 107 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 CHIAQ9BZP6 476 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 NRIP3Q9NQ35 241 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 PURGQ9UJV8 347 aaKnown RBP11.65□□□□□ -0.54
COL18A1-201ENST00000342220 CSAG2Q9Y5P2 127 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 ZNF814B7Z6K7 855 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 OGG1O15527 345 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 CXCL13O43927 109 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 ITGB2P05107 769 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 GUCA1AP43080 201 aaPredicted RBP11.65□□□□□ -0.54
COL18A1-201ENST00000342220 HACD4Q5VWC8 232 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.65□□□□□ -0.54
COL18A1-201ENST00000342220 UEVLDQ8IX04 471 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 ADAMTS14Q8WXS8 1223 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 HGDQ93099 445 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 ZNF275Q9NSD4 429 aaPredicted RBP11.65□□□□□ -0.54
COL18A1-201ENST00000342220 ABRACLQ9P1F3 81 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 SSNA1O43805 119 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 SIRPAP78324 504 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 PITPNAQ00169 270 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 SNTB2Q13425 540 aaKnown RBP11.65□□□□□ -0.54
COL18A1-201ENST00000342220 RBMS2Q15434 407 aaKnown RBP11.65□□□□□ -0.54
COL18A1-201ENST00000342220 TAF13Q15543 124 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 ZSWIM7Q19AV6 140 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 RBMS3Q6XE24 437 aaKnown RBP11.65□□□□□ -0.54
COL18A1-201ENST00000342220 H1FNTQ75WM6 255 aaPredicted RBP11.65□□□□□ -0.54
COL18A1-201ENST00000342220 ASCL5Q7RTU5 278 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 KRT77Q7Z794 578 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 OR2M3Q8NG83 312 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 ZNF426Q9BUY5 554 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 ADAM19Q9H013 955 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 SLC26A1Q9H2B4 701 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 FLVCR2Q9UPI3 526 aa11.65□□□□□ -0.54
COL18A1-201ENST00000342220 ZFHX4Q86UP3 3567 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 ATMQ13315 3056 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 NPIPA2E9PIF3 369 aa11.64□□□□□ -0.55
COL18A1-201ENST00000342220 NPIPA3F8WFD2 350 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms