RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 ECH1Q13011 328 aa12.84□□□□□ -0.35
CSRP1-201ENST00000340006 CDONQ4KMG0 1287 aa12.84□□□□□ -0.35
CSRP1-201ENST00000340006 DEGS2Q6QHC5 323 aa12.84□□□□□ -0.35
CSRP1-201ENST00000340006 RHOUQ7L0Q8 258 aa12.84□□□□□ -0.35
CSRP1-201ENST00000340006 ANKRD13BQ86YJ7 626 aa12.84□□□□□ -0.35
CSRP1-201ENST00000340006 WFDC8Q8IUA0 241 aa12.84□□□□□ -0.35
CSRP1-201ENST00000340006 SPTSSAQ969W0 71 aa12.84□□□□□ -0.35
CSRP1-201ENST00000340006 MS4A3Q96HJ5 214 aa12.84□□□□□ -0.35
CSRP1-201ENST00000340006 BRD7Q9NPI1 651 aa12.84□□□□□ -0.35
CSRP1-201ENST00000340006 MRM2Q9UI43 246 aaKnown RBP12.84□□□□□ -0.35
CSRP1-201ENST00000340006 ENPP5Q9UJA9 477 aa12.84□□□□□ -0.35
CSRP1-201ENST00000340006 LRP12Q9Y561 859 aa12.84□□□□□ -0.35
CSRP1-201ENST00000340006 C5orf49A4QMS7 147 aa12.83□□□□□ -0.35
CSRP1-201ENST00000340006 PRR32B1ATL7 298 aa12.83□□□□□ -0.35
CSRP1-201ENST00000340006 ZNF701M0R085 212 aaPredicted RBP12.83□□□□□ -0.35
CSRP1-201ENST00000340006 M0R1B8 84 aa12.83□□□□□ -0.35
CSRP1-201ENST00000340006 SYNGR3O43761 229 aa12.83□□□□□ -0.35
CSRP1-201ENST00000340006 ZNF254O75437 659 aa12.83□□□□□ -0.35
CSRP1-201ENST00000340006 LALBAP00709 142 aa12.83□□□□□ -0.35
CSRP1-201ENST00000340006 NR4A1P22736 598 aa12.83□□□□□ -0.35
CSRP1-201ENST00000340006 OPRL1P41146 370 aa12.83□□□□□ -0.35
CSRP1-201ENST00000340006 GDI2P50395 445 aaKnown RBP12.83□□□□□ -0.35
CSRP1-201ENST00000340006 GRB2P62993 217 aaKnown RBP12.83□□□□□ -0.35
CSRP1-201ENST00000340006 ROM1Q03395 351 aa12.83□□□□□ -0.35
CSRP1-201ENST00000340006 SSX1Q16384 188 aa12.83□□□□□ -0.35
CSRP1-201ENST00000340006 LIPNQ5VXI9 398 aa12.83□□□□□ -0.35
CSRP1-201ENST00000340006 SLC16A12Q6ZSM3 486 aa12.83□□□□□ -0.35
CSRP1-201ENST00000340006 KLBQ86Z14 1044 aa12.83□□□□□ -0.35
CSRP1-201ENST00000340006 ZNF283Q8N7M2 679 aa12.83□□□□□ -0.35
CSRP1-201ENST00000340006 RAB2BQ8WUD1 216 aa12.83□□□□□ -0.35
CSRP1-201ENST00000340006 C12orf43Q96C57 262 aaKnown RBP12.83□□□□□ -0.35
CSRP1-201ENST00000340006 MOV10Q9HCE1 1003 aaKnown RBP12.83□□□□□ -0.35
CSRP1-201ENST00000340006 ISYNA1Q9NPH2 558 aa12.83□□□□□ -0.35
CSRP1-201ENST00000340006 PNRC2Q9NPJ4 139 aaKnown RBP12.83□□□□□ -0.35
CSRP1-201ENST00000340006 BABAM2Q9NXR7 383 aa12.83□□□□□ -0.35
CSRP1-201ENST00000340006 GTF2A1LQ9UNN4 478 aa12.83□□□□□ -0.35
CSRP1-201ENST00000340006 GRIP1Q9Y3R0 1128 aa12.83□□□□□ -0.35
CSRP1-201ENST00000340006 PNMA8CA0A1B0GUJ8 204 aa12.83□□□□□ -0.36
CSRP1-201ENST00000340006 OR6C6A6NF89 314 aa12.83□□□□□ -0.36
CSRP1-201ENST00000340006 CASKO14936 926 aa12.83□□□□□ -0.36
CSRP1-201ENST00000340006 DBHP09172 617 aa12.83□□□□□ -0.36
CSRP1-201ENST00000340006 CCKARP32238 428 aa12.83□□□□□ -0.36
CSRP1-201ENST00000340006 SLC6A9P48067 706 aa12.83□□□□□ -0.36
CSRP1-201ENST00000340006 GBX2P52951 348 aaPredicted RBP12.83□□□□□ -0.36
CSRP1-201ENST00000340006 TPTEP56180 551 aa12.83□□□□□ -0.36
CSRP1-201ENST00000340006 TFF3Q07654 80 aa12.83□□□□□ -0.36
CSRP1-201ENST00000340006 ACSM1Q08AH1 577 aa12.83□□□□□ -0.36
CSRP1-201ENST00000340006 CNPY1Q3B7I2 92 aa12.83□□□□□ -0.36
CSRP1-201ENST00000340006 LIPKQ5VXJ0 399 aa12.83□□□□□ -0.36
CSRP1-201ENST00000340006 SSX8Q7RTT4 187 aa12.83□□□□□ -0.36
CSRP1-201ENST00000340006 SLC30A7Q8NEW0 376 aa12.83□□□□□ -0.36
CSRP1-201ENST00000340006 DOK1Q99704 481 aa12.83□□□□□ -0.36
CSRP1-201ENST00000340006 KCNJ15Q99712 375 aa12.83□□□□□ -0.36
CSRP1-201ENST00000340006 NGBQ9NPG2 151 aa12.83□□□□□ -0.36
CSRP1-201ENST00000340006 FBXL3Q9UKT7 428 aa12.83□□□□□ -0.36
CSRP1-201ENST00000340006 COL12A1Q99715 3063 aa12.82□□□□□ -0.36
CSRP1-201ENST00000340006 TMEM269A0A1B0GVZ9 245 aa12.82□□□□□ -0.36
CSRP1-201ENST00000340006 WIPF3A6NGB9 483 aa12.82□□□□□ -0.36
CSRP1-201ENST00000340006 H3BMQ9 156 aa12.82□□□□□ -0.36
CSRP1-201ENST00000340006 GABARAPO95166 117 aa12.82□□□□□ -0.36
CSRP1-201ENST00000340006 CELA3BP08861 270 aa12.82□□□□□ -0.36
CSRP1-201ENST00000340006 CPEP16870 476 aa12.82□□□□□ -0.36
CSRP1-201ENST00000340006 ZNF14P17017 642 aaPredicted RBP12.82□□□□□ -0.36
CSRP1-201ENST00000340006 PSMB10P40306 273 aa12.82□□□□□ -0.36
CSRP1-201ENST00000340006 SORDQ00796 357 aa12.82□□□□□ -0.36
CSRP1-201ENST00000340006 TBC1D28Q2M2D7 210 aa12.82□□□□□ -0.36
CSRP1-201ENST00000340006 ZNF584Q8IVC4 421 aa12.82□□□□□ -0.36
CSRP1-201ENST00000340006 PHC2Q8IXK0 858 aa12.82□□□□□ -0.36
CSRP1-201ENST00000340006 SYS1Q8N2H4 156 aa12.82□□□□□ -0.36
CSRP1-201ENST00000340006 OR1J2Q8NGS2 313 aa12.82□□□□□ -0.36
CSRP1-201ENST00000340006 SSC4DQ8WTU2 575 aa12.82□□□□□ -0.36
CSRP1-201ENST00000340006 COQ7Q99807 217 aa12.82□□□□□ -0.36
CSRP1-201ENST00000340006 TRIM36Q9NQ86 728 aa12.82□□□□□ -0.36
CSRP1-201ENST00000340006 DDX28Q9NUL7 540 aaKnown RBP12.82□□□□□ -0.36
CSRP1-201ENST00000340006 ACOXLQ9NUZ1 547 aa12.82□□□□□ -0.36
CSRP1-201ENST00000340006 LOC100509620A0A075B734 347 aa12.81□□□□□ -0.36
CSRP1-201ENST00000340006 IGKV3-15P01624 115 aa12.81□□□□□ -0.36
CSRP1-201ENST00000340006 APOC1P02654 83 aa12.81□□□□□ -0.36
CSRP1-201ENST00000340006 BDH1Q02338 343 aa12.81□□□□□ -0.36
CSRP1-201ENST00000340006 ZNF684Q5T5D7 378 aa12.81□□□□□ -0.36
CSRP1-201ENST00000340006 NAA40Q86UY6 237 aa12.81□□□□□ -0.36
CSRP1-201ENST00000340006 ZFP41Q8N8Y5 198 aa12.81□□□□□ -0.36
CSRP1-201ENST00000340006 UFD1Q92890 307 aa12.81□□□□□ -0.36
CSRP1-201ENST00000340006 ZNF75AQ96N20 296 aa12.81□□□□□ -0.36
CSRP1-201ENST00000340006 NIPAL2Q9H841 368 aa12.81□□□□□ -0.36
CSRP1-201ENST00000340006 NDUFB11Q9NX14 153 aa12.81□□□□□ -0.36
CSRP1-201ENST00000340006 THBDP07204 575 aa12.81□□□□□ -0.36
CSRP1-201ENST00000340006 ANXA2P07355 339 aaKnown RBP12.81□□□□□ -0.36
CSRP1-201ENST00000340006 COX5BP10606 129 aa12.81□□□□□ -0.36
CSRP1-201ENST00000340006 GADD45AP24522 165 aa12.81□□□□□ -0.36
CSRP1-201ENST00000340006 CX3CR1P49238 355 aa12.81□□□□□ -0.36
CSRP1-201ENST00000340006 SRSF1Q07955 248 aaKnown RBP eCLIP12.81□□□□□ -0.36
CSRP1-201ENST00000340006 TPBGQ13641 420 aa12.81□□□□□ -0.36
CSRP1-201ENST00000340006 CTF1Q16619 201 aa12.81□□□□□ -0.36
CSRP1-201ENST00000340006 RSPO1Q2MKA7 263 aaPredicted RBP12.81□□□□□ -0.36
CSRP1-201ENST00000340006 RPL3LQ92901 407 aaKnown RBP12.81□□□□□ -0.36
CSRP1-201ENST00000340006 PELI1Q96FA3 418 aa12.81□□□□□ -0.36
CSRP1-201ENST00000340006 KCNS3Q9BQ31 491 aa12.81□□□□□ -0.36
CSRP1-201ENST00000340006 CDH20Q9HBT6 801 aa12.81□□□□□ -0.36
CSRP1-201ENST00000340006 EIF3KQ9UBQ5 218 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms