RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 C12orf54Q6X4T0 127 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 TTC16Q8NEE8 873 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 OR8S1Q8NH09 359 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 SYNPRQ8TBG9 265 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 PINX1Q96BK5 328 aaKnown RBP3.76□□□□□ -1.81
NEDD4-201ENST00000338963 MRGPRX3Q96LB0 322 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 JSRP1Q96MG2 331 aaPredicted RBP3.76□□□□□ -1.81
NEDD4-201ENST00000338963 FAM110AQ9BQ89 295 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 OR6C3Q9NZP0 311 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 HIF3AQ9Y2N7 669 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 CSAG2Q9Y5P2 127 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 A6NDN8 102 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 FAM183AA6NL82 134 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 PROB1E7EW31 1015 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 AGPAT2O15120 278 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 ZNF207O43670 478 aaKnown RBP3.76□□□□□ -1.81
NEDD4-201ENST00000338963 OR1I1O60431 355 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 OR8U9P0C7N5 309 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 MPLP40238 635 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 HMGCS2P54868 508 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 HYAL1Q12794 435 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 SYPL2Q5VXT5 272 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 DPY19L4Q7Z388 723 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 CTU1Q7Z7A3 348 aaKnown RBP3.76□□□□□ -1.81
NEDD4-201ENST00000338963 SPNS2Q8IVW8 549 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 OR5A1Q8NGJ0 315 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 OR4L1Q8NH43 312 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 LRRN4Q8WUT4 740 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 RNF133Q8WVZ7 376 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 MRPL24Q96A35 216 aaKnown RBP3.76□□□□□ -1.81
NEDD4-201ENST00000338963 GPR21Q99679 349 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 KCNIP1Q9NZI2 227 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 V9GY05 133 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 CORTO00230 105 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 CCL25O15444 150 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 AMY2AP04746 511 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 THPOP40225 353 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 ARRB1P49407 418 aaPredicted RBP3.76□□□□□ -1.81
NEDD4-201ENST00000338963 TLE3Q04726 772 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 PMS2P11Q13670 270 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 ADIRFQ15847 76 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 ZNF791Q3KP31 576 aaPredicted RBP3.76□□□□□ -1.81
NEDD4-201ENST00000338963 CTSL3PQ5NE16 218 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 LDLRAD2Q5SZI1 272 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 GPR157Q5UAW9 335 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 DCAF12L2Q5VW00 463 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 ZNF776Q68DI1 518 aaPredicted RBP3.76□□□□□ -1.81
NEDD4-201ENST00000338963 CFAP52Q8N1V2 620 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 STXBP6Q8NFX7 210 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 FAM222BQ8WU58 562 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 C2orf50Q96LR7 162 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 G6PC3Q9BUM1 346 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 KATNBL1Q9H079 304 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 WDR13Q9H1Z4 485 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 METTL7AQ9H8H3 244 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 LRIT1Q9P2V4 623 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 TRAPPC2LQ9UL33 140 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 SMIM30A4D0T7 59 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 NPEPPSL1A6NEC2 478 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 SIRPB1O00241 398 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 RBFOX2O43251 390 aaKnown RBP eCLIP3.76□□□□□ -1.81
NEDD4-201ENST00000338963 ANKRD34CP0C6C1 535 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 ESDP10768 282 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 LYL1P12980 280 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 GABRA3P34903 492 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 BSGP35613 385 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 SRP14P37108 136 aaKnown RBP3.76□□□□□ -1.81
NEDD4-201ENST00000338963 CEACAM3P40198 252 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 CSNK1A1P48729 337 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 LBX1P52954 281 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 CCL7P80098 99 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 PIN1Q13526 163 aaPredicted RBP3.76□□□□□ -1.81
NEDD4-201ENST00000338963 ALG10Q5BKT4 473 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 TEX38Q6PEX7 206 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 UNQ6126/PRO20091Q6UXV3 157 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 MDGA2Q7Z553 956 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 TMEM173Q86WV6 379 aaPredicted RBP3.76□□□□□ -1.81
NEDD4-201ENST00000338963 RNF175Q8N4F7 328 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 GNPNAT1Q96EK6 184 aaPredicted RBP3.76□□□□□ -1.81
NEDD4-201ENST00000338963 OR10C1Q96KK4 312 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 SNX22Q96L94 193 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 IP6K3Q96PC2 410 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 SLC39A8Q9C0K1 460 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 CHODLQ9H9P2 273 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 FGF21Q9NSA1 209 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 TCHHQ07283 1943 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 TRAV8-7A0A075B6U6 113 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 IFITM5A6NNB3 132 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 GPR32O75388 356 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 ECI1P42126 302 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 ERVS71-1P61550 626 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 ZNF266Q14584 549 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 PHF19Q5T6S3 580 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 LYPLAL1Q5VWZ2 237 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 TMEM108Q6UXF1 575 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 ETFBKMTQ8IXQ9 262 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 Q8WTZ3 238 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 TSPAN32Q96QS1 320 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 P2RX4Q99571 388 aa3.75□□□□□ -1.81
NEDD4-201ENST00000338963 KLHDC3Q9BQ90 382 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms