RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 SH3BGRL2Q9UJC5 107 aa12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 PMF1-BGLAPU3KQ54 211 aa12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 TRBV5-5A0A0J9YX44 114 aa12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 ZNF503-AS2A6NEH8 195 aa12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 ACOD1A6NK06 481 aa12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 CASKO14936 926 aa12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 GATBO75879 557 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 CNOT4O95628 575 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 CGAP01215 116 aa12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 IL1AP01583 271 aa12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 CRHP06850 196 aa12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 OCM2P0CE71 109 aa12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 CTSSP25774 331 aa12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 CEACAM8P31997 349 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 SOX2P48431 317 aa12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 RBPJQ06330 500 aa12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 LSAMPQ13449 338 aa12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 Q499Y3 187 aa12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 PABPC1L2AQ5JQF8 200 aa12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 PAMR1Q6UXH9 720 aa12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 ZNF610Q8N9Z0 462 aa12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 BCL2L2Q92843 193 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 ORAI1Q96D31 301 aa12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 ZFP3Q96NJ6 502 aa12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 MED18Q9BUE0 208 aa12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 SLIRPQ9GZT3 109 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 ERVH48-1M5A8F1 160 aa12.88□□□□□ -0.35
CDK5RAP3-201ENST00000338399 P2RY10O00398 339 aa12.88□□□□□ -0.35
CDK5RAP3-201ENST00000338399 PIN1P1O15428 100 aa12.88□□□□□ -0.35
CDK5RAP3-201ENST00000338399 LYZL6O75951 148 aa12.88□□□□□ -0.35
CDK5RAP3-201ENST00000338399 TTRP02766 147 aa12.88□□□□□ -0.35
CDK5RAP3-201ENST00000338399 ANXA2P07355 339 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-201ENST00000338399 UCHL1P09936 223 aa12.88□□□□□ -0.35
CDK5RAP3-201ENST00000338399 CD79AP11912 226 aa12.88□□□□□ -0.35
CDK5RAP3-201ENST00000338399 ANOS1P23352 680 aa12.88□□□□□ -0.35
CDK5RAP3-201ENST00000338399 OTX1P32242 354 aaPredicted RBP12.88□□□□□ -0.35
CDK5RAP3-201ENST00000338399 HTR5AP47898 357 aa12.88□□□□□ -0.35
CDK5RAP3-201ENST00000338399 SLC6A9P48067 706 aa12.88□□□□□ -0.35
CDK5RAP3-201ENST00000338399 EIF2S3LQ2VIR3 472 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-201ENST00000338399 ZNF704Q6ZNC4 412 aaPredicted RBP12.88□□□□□ -0.35
CDK5RAP3-201ENST00000338399 FAM57BQ71RH2 274 aa12.88□□□□□ -0.35
CDK5RAP3-201ENST00000338399 ELMOD2Q8IZ81 293 aa12.88□□□□□ -0.35
CDK5RAP3-201ENST00000338399 GPR148Q8TDV2 347 aa12.88□□□□□ -0.35
CDK5RAP3-201ENST00000338399 TSEN15Q8WW01 171 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-201ENST00000338399 SPTSSAQ969W0 71 aa12.88□□□□□ -0.35
CDK5RAP3-201ENST00000338399 DERL3Q96Q80 235 aa12.88□□□□□ -0.35
CDK5RAP3-201ENST00000338399 NOX4Q9NPH5 578 aa12.88□□□□□ -0.35
CDK5RAP3-201ENST00000338399 ETAA1Q9NY74 926 aa12.88□□□□□ -0.35
CDK5RAP3-201ENST00000338399 CCDC59Q9P031 241 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-201ENST00000338399 NUFIP1Q9UHK0 495 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-201ENST00000338399 CIB4A0PJX0 185 aa12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 OR6C6A6NF89 314 aa12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 M0R135 149 aa12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 RAD51DO75771 328 aa12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 CRYGSP22914 178 aa12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 MYL9P24844 172 aa12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 SOX6P35712 828 aa12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 MTNR1BP49286 362 aa12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 CAV3P56539 151 aa12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 TGFBR3Q03167 851 aa12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 PMPCAQ10713 525 aa12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 ECH1Q13011 328 aa12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 TBRG1Q3YBR2 411 aa12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 SFRP5Q5T4F7 317 aa12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 TMEM244Q5VVB8 128 aa12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 PCSK4Q6UW60 755 aa12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 PRSS45Q7RTY3 260 aa12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 ZNF433Q8N7K0 673 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 OR8B12Q8NGG6 310 aa12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 ZNF799Q96GE5 643 aa12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 BARHL1Q9BZE3 327 aa12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 MOB1AQ9H8S9 216 aa12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 NOX3Q9HBY0 568 aa12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 ZNF319Q9P2F9 582 aa12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 LOC107986453A0A1B0GWG9 222 aa12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 ARL6IP5O75915 188 aa12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 CLPXO76031 633 aa12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 NCR1O76036 304 aa12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 ISG15P05161 165 aa12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 ACSM4P0C7M7 580 aa12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 UBCP0CG48 685 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 RORCP51449 518 aa12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 RAB1AP62820 205 aa12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 TSC22D1Q15714 1073 aa12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 HSD17B12Q53GQ0 312 aa12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 GABRG1Q8N1C3 465 aa12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 CPEB3Q8NE35 698 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 PHYHIPQ92561 330 aa12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 SLC25A46Q96AG3 418 aa12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 SLC17A5Q9NRA2 495 aa12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 HHLA2Q9UM44 414 aa12.87□□□□□ -0.35
CDK5RAP3-201ENST00000338399 SHANK1Q9Y566 2161 aa12.86□□□□□ -0.35
CDK5RAP3-201ENST00000338399 C5orf63A6NC05 138 aa12.86□□□□□ -0.35
CDK5RAP3-201ENST00000338399 E9PLN8 166 aa12.86□□□□□ -0.35
CDK5RAP3-201ENST00000338399 UBL3O95164 117 aa12.86□□□□□ -0.35
CDK5RAP3-201ENST00000338399 APOC1P02654 83 aa12.86□□□□□ -0.35
CDK5RAP3-201ENST00000338399 ACHEP22303 614 aa12.86□□□□□ -0.35
CDK5RAP3-201ENST00000338399 MAPK3P27361 379 aaPredicted RBP12.86□□□□□ -0.35
CDK5RAP3-201ENST00000338399 ARR3P36575 388 aa12.86□□□□□ -0.35
CDK5RAP3-201ENST00000338399 TPTEP56180 551 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms