RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 TRBV5-5A0A0J9YX44 114 aa12.85□□□□□ -0.35
CBX3-201ENST00000337620 TTLL8A6PVC2 850 aa12.85□□□□□ -0.35
CBX3-201ENST00000337620 P2RY10O00398 339 aa12.85□□□□□ -0.35
CBX3-201ENST00000337620 SYNGR3O43761 229 aa12.85□□□□□ -0.35
CBX3-201ENST00000337620 HLA-HP01893 362 aa12.85□□□□□ -0.35
CBX3-201ENST00000337620 DBHP09172 617 aa12.85□□□□□ -0.35
CBX3-201ENST00000337620 TMIGD3P0DMS9 266 aaPredicted RBP12.85□□□□□ -0.35
CBX3-201ENST00000337620 CD79AP11912 226 aa12.85□□□□□ -0.35
CBX3-201ENST00000337620 MAPK3P27361 379 aaPredicted RBP12.85□□□□□ -0.35
CBX3-201ENST00000337620 RSPO1Q2MKA7 263 aaPredicted RBP12.85□□□□□ -0.35
CBX3-201ENST00000337620 FAM57BQ71RH2 274 aa12.85□□□□□ -0.35
CBX3-201ENST00000337620 BTLAQ7Z6A9 289 aa12.85□□□□□ -0.35
CBX3-201ENST00000337620 OR1F12Q8NHA8 337 aa12.85□□□□□ -0.35
CBX3-201ENST00000337620 SPTSSAQ969W0 71 aa12.85□□□□□ -0.35
CBX3-201ENST00000337620 DERL3Q96Q80 235 aa12.85□□□□□ -0.35
CBX3-201ENST00000337620 WNT5BQ9H1J7 359 aa12.85□□□□□ -0.35
CBX3-201ENST00000337620 ZNF224Q9NZL3 707 aa12.85□□□□□ -0.35
CBX3-201ENST00000337620 PIN1P1O15428 100 aa12.85□□□□□ -0.35
CBX3-201ENST00000337620 TTRP02766 147 aa12.85□□□□□ -0.35
CBX3-201ENST00000337620 HOXD4P09016 255 aaPredicted RBP12.85□□□□□ -0.35
CBX3-201ENST00000337620 MMP7P09237 267 aaPredicted RBP12.85□□□□□ -0.35
CBX3-201ENST00000337620 CTSSP25774 331 aa12.85□□□□□ -0.35
CBX3-201ENST00000337620 HTR5AP47898 357 aa12.85□□□□□ -0.35
CBX3-201ENST00000337620 HIKESHIQ53FT3 197 aa12.85□□□□□ -0.35
CBX3-201ENST00000337620 PABPC1L2AQ5JQF8 200 aa12.85□□□□□ -0.35
CBX3-201ENST00000337620 TMEM244Q5VVB8 128 aa12.85□□□□□ -0.35
CBX3-201ENST00000337620 ANKRD16Q6P6B7 361 aa12.85□□□□□ -0.35
CBX3-201ENST00000337620 DOLPP1Q86YN1 238 aa12.85□□□□□ -0.35
CBX3-201ENST00000337620 ELMOD2Q8IZ81 293 aa12.85□□□□□ -0.35
CBX3-201ENST00000337620 OR1K1Q8NGR3 316 aa12.85□□□□□ -0.35
CBX3-201ENST00000337620 PHYHIPQ92561 330 aa12.85□□□□□ -0.35
CBX3-201ENST00000337620 TMEM106AQ96A25 262 aa12.85□□□□□ -0.35
CBX3-201ENST00000337620 WACQ9BTA9 647 aa12.85□□□□□ -0.35
CBX3-201ENST00000337620 MMP27Q9H306 513 aa12.85□□□□□ -0.35
CBX3-201ENST00000337620 MOB1AQ9H8S9 216 aa12.85□□□□□ -0.35
CBX3-201ENST00000337620 NUFIP1Q9UHK0 495 aaKnown RBP12.85□□□□□ -0.35
CBX3-201ENST00000337620 LOC107986453A0A1B0GWG9 222 aa12.84□□□□□ -0.35
CBX3-201ENST00000337620 ANKRD61A6NGH8 418 aa12.84□□□□□ -0.35
CBX3-201ENST00000337620 M0R135 149 aa12.84□□□□□ -0.35
CBX3-201ENST00000337620 SLC19A2O60779 497 aa12.84□□□□□ -0.35
CBX3-201ENST00000337620 TNFSF13O75888 250 aa12.84□□□□□ -0.35
CBX3-201ENST00000337620 UBCP0CG48 685 aaKnown RBP12.84□□□□□ -0.35
CBX3-201ENST00000337620 SRMP19623 302 aa12.84□□□□□ -0.35
CBX3-201ENST00000337620 IGHV1-2P23083 117 aa12.84□□□□□ -0.35
CBX3-201ENST00000337620 BMXP51813 675 aa12.84□□□□□ -0.35
CBX3-201ENST00000337620 ECH1Q13011 328 aa12.84□□□□□ -0.35
CBX3-201ENST00000337620 Q6ZT83 130 aa12.84□□□□□ -0.35
CBX3-201ENST00000337620 STARD4Q96DR4 205 aa12.84□□□□□ -0.35
CBX3-201ENST00000337620 ZNF799Q96GE5 643 aa12.84□□□□□ -0.35
CBX3-201ENST00000337620 DACH2Q96NX9 599 aa12.84□□□□□ -0.35
CBX3-201ENST00000337620 TP63Q9H3D4 680 aaPredicted RBP12.84□□□□□ -0.35
CBX3-201ENST00000337620 PLSCR4Q9NRQ2 329 aa12.84□□□□□ -0.35
CBX3-201ENST00000337620 HHLA2Q9UM44 414 aa12.84□□□□□ -0.35
CBX3-201ENST00000337620 PROCRQ9UNN8 238 aa12.84□□□□□ -0.35
CBX3-201ENST00000337620 DHDHQ9UQ10 334 aa12.84□□□□□ -0.35
CBX3-201ENST00000337620 NBEAQ8NFP9 2946 aa12.84□□□□□ -0.35
CBX3-201ENST00000337620 TRAV1-2A0A0B4J238 106 aa12.83□□□□□ -0.35
CBX3-201ENST00000337620 OR6C6A6NF89 314 aa12.83□□□□□ -0.35
CBX3-201ENST00000337620 LYZL6O75951 148 aa12.83□□□□□ -0.35
CBX3-201ENST00000337620 ISG15P05161 165 aa12.83□□□□□ -0.35
CBX3-201ENST00000337620 ACSM4P0C7M7 580 aa12.83□□□□□ -0.35
CBX3-201ENST00000337620 TIMP3P35625 211 aa12.83□□□□□ -0.35
CBX3-201ENST00000337620 TGFBR3Q03167 851 aa12.83□□□□□ -0.35
CBX3-201ENST00000337620 LY6DQ14210 128 aa12.83□□□□□ -0.35
CBX3-201ENST00000337620 GFOD2Q3B7J2 385 aa12.83□□□□□ -0.35
CBX3-201ENST00000337620 SFRP5Q5T4F7 317 aa12.83□□□□□ -0.35
CBX3-201ENST00000337620 TPRA1Q86W33 373 aa12.83□□□□□ -0.35
CBX3-201ENST00000337620 COMMD2Q86X83 199 aa12.83□□□□□ -0.35
CBX3-201ENST00000337620 NAXEQ8NCW5 288 aa12.83□□□□□ -0.35
CBX3-201ENST00000337620 OR8B12Q8NGG6 310 aa12.83□□□□□ -0.35
CBX3-201ENST00000337620 OR51E1Q8TCB6 317 aa12.83□□□□□ -0.35
CBX3-201ENST00000337620 BCL2L2Q92843 193 aaPredicted RBP12.83□□□□□ -0.35
CBX3-201ENST00000337620 PGAM5Q96HS1 289 aa12.83□□□□□ -0.35
CBX3-201ENST00000337620 NXF2Q9GZY0 626 aaKnown RBP12.83□□□□□ -0.35
CBX3-201ENST00000337620 ZNF319Q9P2F9 582 aa12.83□□□□□ -0.35
CBX3-201ENST00000337620 SH3BGRL2Q9UJC5 107 aa12.83□□□□□ -0.35
CBX3-201ENST00000337620 TINAGQ9UJW2 476 aa12.83□□□□□ -0.35
CBX3-201ENST00000337620 RP1L1Q8IWN7 2480 aaPredicted RBP12.83□□□□□ -0.36
CBX3-201ENST00000337620 RTTNQ86VV8 2226 aa12.83□□□□□ -0.36
CBX3-201ENST00000337620 ITPR1Q14643 2758 aa12.83□□□□□ -0.36
CBX3-201ENST00000337620 CIB4A0PJX0 185 aa12.83□□□□□ -0.36
CBX3-201ENST00000337620 ZNF503-AS2A6NEH8 195 aa12.83□□□□□ -0.36
CBX3-201ENST00000337620 APOC1P02654 83 aa12.83□□□□□ -0.36
CBX3-201ENST00000337620 ACHEP22303 614 aa12.83□□□□□ -0.36
CBX3-201ENST00000337620 ANOS1P23352 680 aa12.83□□□□□ -0.36
CBX3-201ENST00000337620 OTX1P32242 354 aaPredicted RBP12.83□□□□□ -0.36
CBX3-201ENST00000337620 TPTEP56180 551 aa12.83□□□□□ -0.36
CBX3-201ENST00000337620 OR10A3P58181 314 aa12.83□□□□□ -0.36
CBX3-201ENST00000337620 RAB1AP62820 205 aa12.83□□□□□ -0.36
CBX3-201ENST00000337620 NR2C2APQ86WQ0 139 aa12.83□□□□□ -0.36
CBX3-201ENST00000337620 ZNF610Q8N9Z0 462 aa12.83□□□□□ -0.36
CBX3-201ENST00000337620 CPEB3Q8NE35 698 aaKnown RBP12.83□□□□□ -0.36
CBX3-201ENST00000337620 OR6Q1Q8NGQ2 317 aa12.83□□□□□ -0.36
CBX3-201ENST00000337620 OR13C3Q8NGS6 347 aa12.83□□□□□ -0.36
CBX3-201ENST00000337620 ASB5Q8WWX0 329 aa12.83□□□□□ -0.36
CBX3-201ENST00000337620 OPN3Q9H1Y3 402 aaPredicted RBP12.83□□□□□ -0.36
CBX3-201ENST00000337620 PLEKHB1Q9UF11 243 aaPredicted RBP12.83□□□□□ -0.36
CBX3-201ENST00000337620 ZGRF1Q86YA3 2104 aa12.83□□□□□ -0.36
CBX3-201ENST00000337620 TBX1O43435 398 aa12.82□□□□□ -0.36
CBX3-201ENST00000337620 SYT7O43581 403 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms