RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 ZNRF4Q8WWF5 429 aa23.47■■□□□ 1.35
ATPAF1-201ENST00000329231 BEX2Q9BXY8 128 aa23.47■■□□□ 1.35
ATPAF1-201ENST00000329231 PTTG3PQ9NZH4 202 aa23.47■■□□□ 1.35
ATPAF1-201ENST00000329231 TVP23AA6NH52 213 aa23.46■■□□□ 1.35
ATPAF1-201ENST00000329231 F5H5K5 113 aa23.46■■□□□ 1.35
ATPAF1-201ENST00000329231 SPI1P17947 270 aa23.46■■□□□ 1.35
ATPAF1-201ENST00000329231 GRK5P34947 590 aa23.46■■□□□ 1.35
ATPAF1-201ENST00000329231 BLVRAP53004 296 aa23.46■■□□□ 1.35
ATPAF1-201ENST00000329231 CDK5R2Q13319 367 aa23.46■■□□□ 1.35
ATPAF1-201ENST00000329231 RSPO1Q2MKA7 263 aaPredicted RBP23.46■■□□□ 1.35
ATPAF1-201ENST00000329231 CLDND2Q8NHS1 167 aa23.46■■□□□ 1.35
ATPAF1-201ENST00000329231 C1orf159Q96HA4 380 aa23.46■■□□□ 1.35
ATPAF1-201ENST00000329231 MAP6Q96JE9 813 aa23.46■■□□□ 1.35
ATPAF1-201ENST00000329231 SHARPINQ9H0F6 387 aa23.46■■□□□ 1.35
ATPAF1-201ENST00000329231 NARFLQ9H6Q4 476 aa23.46■■□□□ 1.35
ATPAF1-201ENST00000329231 PNRC2Q9NPJ4 139 aaKnown RBP23.46■■□□□ 1.35
ATPAF1-201ENST00000329231 AP4S1Q9Y587 144 aa23.46■■□□□ 1.35
ATPAF1-201ENST00000329231 ANK3Q12955 4377 aaKnown RBP23.45■■□□□ 1.35
ATPAF1-201ENST00000329231 CLDN25C9JDP6 229 aa23.45■■□□□ 1.34
ATPAF1-201ENST00000329231 GYPBP06028 91 aa23.45■■□□□ 1.34
ATPAF1-201ENST00000329231 ACSM4P0C7M7 580 aa23.45■■□□□ 1.34
ATPAF1-201ENST00000329231 ANXA8P13928 327 aa23.45■■□□□ 1.34
ATPAF1-201ENST00000329231 TNFSF4P23510 183 aa23.45■■□□□ 1.34
ATPAF1-201ENST00000329231 CDH15P55291 814 aa23.45■■□□□ 1.34
ATPAF1-201ENST00000329231 TNFAIP6P98066 277 aaPredicted RBP23.45■■□□□ 1.34
ATPAF1-201ENST00000329231 HLXQ14774 488 aaPredicted RBP23.45■■□□□ 1.34
ATPAF1-201ENST00000329231 SLC27A4Q6P1M0 643 aa23.45■■□□□ 1.34
ATPAF1-201ENST00000329231 COLCA1Q6ZS62 124 aa23.45■■□□□ 1.34
ATPAF1-201ENST00000329231 IQCF1Q8N6M8 205 aa23.45■■□□□ 1.34
ATPAF1-201ENST00000329231 NRBF2Q96F24 287 aa23.45■■□□□ 1.34
ATPAF1-201ENST00000329231 TIMD4Q96H15 378 aa23.45■■□□□ 1.34
ATPAF1-201ENST00000329231 C1QTNF5Q9BXJ0 243 aa23.45■■□□□ 1.34
ATPAF1-201ENST00000329231 NTN4Q9HB63 628 aa23.45■■□□□ 1.34
ATPAF1-201ENST00000329231 COMMD3-BMI1R4GMX3 469 aa23.45■■□□□ 1.34
ATPAF1-201ENST00000329231 ABCA2Q9BZC7 2435 aa23.45■■□□□ 1.34
ATPAF1-201ENST00000329231 MALRD1Q5VYJ5 2156 aa23.44■■□□□ 1.34
ATPAF1-201ENST00000329231 IGFBP5P24593 272 aa23.44■■□□□ 1.34
ATPAF1-201ENST00000329231 POU1F1P28069 291 aa23.44■■□□□ 1.34
ATPAF1-201ENST00000329231 TPTEP56180 551 aa23.44■■□□□ 1.34
ATPAF1-201ENST00000329231 SLC3A1Q07837 685 aa23.44■■□□□ 1.34
ATPAF1-201ENST00000329231 ATP6AP1Q15904 470 aa23.44■■□□□ 1.34
ATPAF1-201ENST00000329231 SHQ1Q6PI26 577 aaKnown RBP23.44■■□□□ 1.34
ATPAF1-201ENST00000329231 LYPD4Q6UWN0 246 aa23.44■■□□□ 1.34
ATPAF1-201ENST00000329231 HS3ST5Q8IZT8 346 aa23.44■■□□□ 1.34
ATPAF1-201ENST00000329231 OR6K6Q8NGW6 343 aa23.44■■□□□ 1.34
ATPAF1-201ENST00000329231 CCL17Q92583 94 aa23.44■■□□□ 1.34
ATPAF1-201ENST00000329231 SPTSSAQ969W0 71 aa23.44■■□□□ 1.34
ATPAF1-201ENST00000329231 WDR76Q9H967 626 aa23.44■■□□□ 1.34
ATPAF1-201ENST00000329231 CACNG2Q9Y698 323 aa23.44■■□□□ 1.34
ATPAF1-201ENST00000329231 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP23.43■■□□□ 1.345e-6■■■■□ 22.8
ATPAF1-201ENST00000329231 OSMP13725 252 aa23.43■■□□□ 1.34
ATPAF1-201ENST00000329231 RPS27P42677 84 aaKnown RBP23.43■■□□□ 1.34
ATPAF1-201ENST00000329231 ENTPD1P49961 510 aa23.43■■□□□ 1.34
ATPAF1-201ENST00000329231 MVKQ03426 396 aa23.43■■□□□ 1.34
ATPAF1-201ENST00000329231 ZNF511Q8NB15 262 aa23.43■■□□□ 1.34
ATPAF1-201ENST00000329231 OR2Z1Q8NG97 314 aa23.43■■□□□ 1.34
ATPAF1-201ENST00000329231 RAB1CQ92928 201 aa23.43■■□□□ 1.34
ATPAF1-201ENST00000329231 B4DSR2 109 aa23.42■■□□□ 1.34
ATPAF1-201ENST00000329231 WNT9BO14905 357 aa23.42■■□□□ 1.34
ATPAF1-201ENST00000329231 IFNA2P01563 188 aa23.42■■□□□ 1.34
ATPAF1-201ENST00000329231 SPARCP09486 303 aa23.42■■□□□ 1.34
ATPAF1-201ENST00000329231 FAM157CP0CG43 387 aa23.42■■□□□ 1.34
ATPAF1-201ENST00000329231 CLUP10909 449 aa23.42■■□□□ 1.34
ATPAF1-201ENST00000329231 FCGR1AP12314 374 aa23.42■■□□□ 1.34
ATPAF1-201ENST00000329231 PAICSP22234 425 aaKnown RBP23.42■■□□□ 1.34
ATPAF1-201ENST00000329231 PRKACGP22612 351 aa23.42■■□□□ 1.34
ATPAF1-201ENST00000329231 FASP25445 335 aa23.42■■□□□ 1.34
ATPAF1-201ENST00000329231 PCK2Q16822 640 aa23.42■■□□□ 1.34
ATPAF1-201ENST00000329231 TEX30Q5JUR7 227 aa23.42■■□□□ 1.34
ATPAF1-201ENST00000329231 AVPI1Q5T686 147 aa23.42■■□□□ 1.34
ATPAF1-201ENST00000329231 OR2T2Q6IF00 324 aa23.42■■□□□ 1.34
ATPAF1-201ENST00000329231 Q6ZR03 302 aa23.42■■□□□ 1.34
ATPAF1-201ENST00000329231 DCXRQ7Z4W1 244 aa23.42■■□□□ 1.34
ATPAF1-201ENST00000329231 ATG16L2Q8NAA4 619 aa23.42■■□□□ 1.34
ATPAF1-201ENST00000329231 OR10S1Q8NGN2 331 aa23.42■■□□□ 1.34
ATPAF1-201ENST00000329231 ZNF582Q96NG8 517 aaPredicted RBP23.42■■□□□ 1.34
ATPAF1-201ENST00000329231 HCAR1Q9BXC0 346 aa23.42■■□□□ 1.34
ATPAF1-201ENST00000329231 DDX28Q9NUL7 540 aaKnown RBP23.42■■□□□ 1.34
ATPAF1-201ENST00000329231 TREM2Q9NZC2 230 aa23.42■■□□□ 1.34
ATPAF1-201ENST00000329231 WIPI2Q9Y4P8 454 aa23.42■■□□□ 1.34
ATPAF1-201ENST00000329231 KIAA1324LA8MWY0 1029 aaPredicted RBP23.41■■□□□ 1.34
ATPAF1-201ENST00000329231 M0R135 149 aa23.41■■□□□ 1.34
ATPAF1-201ENST00000329231 ZNF593O00488 134 aaPredicted RBP23.41■■□□□ 1.34
ATPAF1-201ENST00000329231 SURF4O15260 269 aa23.41■■□□□ 1.34
ATPAF1-201ENST00000329231 LCATP04180 440 aa23.41■■□□□ 1.34
ATPAF1-201ENST00000329231 HMGN1P05114 100 aa23.41■■□□□ 1.34
ATPAF1-201ENST00000329231 TNFRSF1AP19438 455 aa23.41■■□□□ 1.34
ATPAF1-201ENST00000329231 HNF1AP20823 631 aa23.41■■□□□ 1.34
ATPAF1-201ENST00000329231 ACTR3P61158 418 aa23.41■■□□□ 1.34
ATPAF1-201ENST00000329231 MALLQ13021 153 aa23.41■■□□□ 1.34
ATPAF1-201ENST00000329231 GINS1Q14691 196 aa23.41■■□□□ 1.34
ATPAF1-201ENST00000329231 FAM120AOSQ5T036 256 aa23.41■■□□□ 1.34
ATPAF1-201ENST00000329231 OR5AS1Q8N127 324 aa23.41■■□□□ 1.34
ATPAF1-201ENST00000329231 OR8G5Q8NG78 346 aa23.41■■□□□ 1.34
ATPAF1-201ENST00000329231 OTULINQ96BN8 352 aa23.41■■□□□ 1.34
ATPAF1-201ENST00000329231 ZNF799Q96GE5 643 aa23.41■■□□□ 1.34
ATPAF1-201ENST00000329231 SELEP16581 610 aa23.4■■□□□ 1.34
ATPAF1-201ENST00000329231 ACSM5Q6NUN0 579 aa23.4■■□□□ 1.34
ATPAF1-201ENST00000329231 PEG10Q86TG7 708 aaKnown RBP23.4■■□□□ 1.34
ATPAF1-201ENST00000329231 OR13G1Q8NGZ3 307 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms