RNA–Protein interactions for RNA: ENST00000317201.6

HOXA3-201, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXA3, Length 2,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-201ENST00000317201 FAM26EQ8N5C1 309 aa13.2□□□□□ -0.3
HOXA3-201ENST00000317201 ARIH2OSQ8N7S6 290 aa13.2□□□□□ -0.3
HOXA3-201ENST00000317201 CCDC107Q8WV48 283 aa13.2□□□□□ -0.3
HOXA3-201ENST00000317201 SLC25A36Q96CQ1 311 aa13.2□□□□□ -0.3
HOXA3-201ENST00000317201 CMKLR1Q99788 373 aa13.2□□□□□ -0.3
HOXA3-201ENST00000317201 SEC11CQ9BY50 192 aa13.2□□□□□ -0.3
HOXA3-201ENST00000317201 C19orf12Q9NSK7 152 aa13.2□□□□□ -0.3
HOXA3-201ENST00000317201 FLRT3Q9NZU0 649 aa13.2□□□□□ -0.3
HOXA3-201ENST00000317201 R4GN57 208 aa13.2□□□□□ -0.3
HOXA3-201ENST00000317201 KANTRA0A1W2PQU2 76 aa13.2□□□□□ -0.3
HOXA3-201ENST00000317201 IFNA10P01566 189 aa13.2□□□□□ -0.3
HOXA3-201ENST00000317201 HLA-DPB1P04440 258 aa13.2□□□□□ -0.3
HOXA3-201ENST00000317201 DEGS2Q6QHC5 323 aa13.2□□□□□ -0.3
HOXA3-201ENST00000317201 CPEB2Q7Z5Q1 589 aaKnown RBP13.2□□□□□ -0.3
HOXA3-201ENST00000317201 TPRA1Q86W33 373 aa13.2□□□□□ -0.3
HOXA3-201ENST00000317201 APCDD1LQ8NCL9 501 aa13.2□□□□□ -0.3
HOXA3-201ENST00000317201 STOML3Q8TAV4 291 aa13.2□□□□□ -0.3
HOXA3-201ENST00000317201 BRIX1Q8TDN6 353 aaKnown RBP13.2□□□□□ -0.3
HOXA3-201ENST00000317201 DUSP19Q8WTR2 217 aa13.2□□□□□ -0.3
HOXA3-201ENST00000317201 NPRL2Q8WTW4 380 aa13.2□□□□□ -0.3
HOXA3-201ENST00000317201 THEM6Q8WUY1 208 aa13.2□□□□□ -0.3
HOXA3-201ENST00000317201 MED31Q9Y3C7 131 aa13.2□□□□□ -0.3
HOXA3-201ENST00000317201 LRRN3E7EW58 273 aa13.19□□□□□ -0.3
HOXA3-201ENST00000317201 HOXB5P09067 269 aa13.19□□□□□ -0.3
HOXA3-201ENST00000317201 SAGP10523 405 aaPredicted RBP13.19□□□□□ -0.3
HOXA3-201ENST00000317201 HOXA5P20719 270 aa13.19□□□□□ -0.3
HOXA3-201ENST00000317201 IL12BP29460 328 aa13.19□□□□□ -0.3
HOXA3-201ENST00000317201 DYRK1AQ13627 763 aa13.19□□□□□ -0.3
HOXA3-201ENST00000317201 PLBD1Q6P4A8 553 aa13.19□□□□□ -0.3
HOXA3-201ENST00000317201 VHLLQ6RSH7 139 aa13.19□□□□□ -0.3
HOXA3-201ENST00000317201 WDR88Q6ZMY6 472 aa13.19□□□□□ -0.3
HOXA3-201ENST00000317201 ZNF620Q6ZNG0 422 aa13.19□□□□□ -0.3
HOXA3-201ENST00000317201 ST7LQ8TDW4 575 aa13.19□□□□□ -0.3
HOXA3-201ENST00000317201 IP6K3Q96PC2 410 aa13.19□□□□□ -0.3
HOXA3-201ENST00000317201 TEAD3Q99594 435 aa13.19□□□□□ -0.3
HOXA3-201ENST00000317201 STRADBQ9C0K7 418 aa13.19□□□□□ -0.3
HOXA3-201ENST00000317201 SLITRK2Q9H156 845 aa13.19□□□□□ -0.3
HOXA3-201ENST00000317201 RYDENQ9NUL5 291 aaKnown RBP13.19□□□□□ -0.3
HOXA3-201ENST00000317201 MED17Q9NVC6 651 aa13.19□□□□□ -0.3
HOXA3-201ENST00000317201 CNIH4Q9P003 139 aa13.19□□□□□ -0.3
HOXA3-201ENST00000317201 GDF2Q9UK05 429 aaPredicted RBP13.19□□□□□ -0.3
HOXA3-201ENST00000317201 LOC102723996A0A087X1L8 192 aa13.19□□□□□ -0.3
HOXA3-201ENST00000317201 A0A1W2PPK0 400 aa13.19□□□□□ -0.3
HOXA3-201ENST00000317201 DLEU1O43261 78 aa13.19□□□□□ -0.3
HOXA3-201ENST00000317201 PRAF2O60831 178 aa13.19□□□□□ -0.3
HOXA3-201ENST00000317201 RLN1P04808 185 aa13.19□□□□□ -0.3
HOXA3-201ENST00000317201 TMIGD3P0DMS9 266 aaPredicted RBP13.19□□□□□ -0.3
HOXA3-201ENST00000317201 THBS2P35442 1172 aa13.19□□□□□ -0.3
HOXA3-201ENST00000317201 CD96P40200 585 aa13.19□□□□□ -0.3
HOXA3-201ENST00000317201 DLX5P56178 289 aa13.19□□□□□ -0.3
HOXA3-201ENST00000317201 HGFACQ04756 655 aa13.19□□□□□ -0.3
HOXA3-201ENST00000317201 PLCXD2Q0VAA5 305 aa13.19□□□□□ -0.3
HOXA3-201ENST00000317201 OR7A5Q15622 319 aa13.19□□□□□ -0.3
HOXA3-201ENST00000317201 ZNF626Q68DY1 528 aa13.19□□□□□ -0.3
HOXA3-201ENST00000317201 LINGO2Q7L985 606 aa13.19□□□□□ -0.3
HOXA3-201ENST00000317201 MEX3DQ86XN8 651 aaKnown RBP13.19□□□□□ -0.3
HOXA3-201ENST00000317201 FGF11Q92914 225 aa13.19□□□□□ -0.3
HOXA3-201ENST00000317201 LMF1Q96S06 567 aa13.19□□□□□ -0.3
HOXA3-201ENST00000317201 LPAR4Q99677 370 aa13.19□□□□□ -0.3
HOXA3-201ENST00000317201 CDC6Q99741 560 aa13.19□□□□□ -0.3
HOXA3-201ENST00000317201 HRH4Q9H3N8 390 aa13.19□□□□□ -0.3
HOXA3-201ENST00000317201 PARPBPQ9NWS1 579 aa13.19□□□□□ -0.3
HOXA3-201ENST00000317201 VCANP13611 3396 aa13.18□□□□□ -0.3
HOXA3-201ENST00000317201 ALG1L2C9J202 215 aa13.18□□□□□ -0.3
HOXA3-201ENST00000317201 QDPRP09417 244 aa13.18□□□□□ -0.3
HOXA3-201ENST00000317201 SFTA3P0C7M3 94 aa13.18□□□□□ -0.3
HOXA3-201ENST00000317201 CDX1P47902 265 aaPredicted RBP13.18□□□□□ -0.3
HOXA3-201ENST00000317201 SLC6A8P48029 635 aa13.18□□□□□ -0.3
HOXA3-201ENST00000317201 NRG3P56975 720 aa13.18□□□□□ -0.3
HOXA3-201ENST00000317201 ALG10BQ5I7T1 473 aa13.18□□□□□ -0.3
HOXA3-201ENST00000317201 HBMQ6B0K9 141 aa13.18□□□□□ -0.3
HOXA3-201ENST00000317201 LPCAT3Q6P1A2 487 aa13.18□□□□□ -0.3
HOXA3-201ENST00000317201 FAM86C1Q9NVL1 165 aa13.18□□□□□ -0.3
HOXA3-201ENST00000317201 KLK11Q9UBX7 282 aa13.18□□□□□ -0.3
HOXA3-201ENST00000317201 UNC119BA6NIH7 251 aa13.18□□□□□ -0.3
HOXA3-201ENST00000317201 IMPA2O14732 288 aa13.18□□□□□ -0.3
HOXA3-201ENST00000317201 ZNF264O43296 627 aa13.18□□□□□ -0.3
HOXA3-201ENST00000317201 REM1O75628 298 aa13.18□□□□□ -0.3
HOXA3-201ENST00000317201 DIRAS3O95661 229 aa13.18□□□□□ -0.3
HOXA3-201ENST00000317201 VSIG10L2P0DP72 767 aa13.18□□□□□ -0.3
HOXA3-201ENST00000317201 CCL4P13236 92 aa13.18□□□□□ -0.3
HOXA3-201ENST00000317201 EGR3Q06889 387 aa13.18□□□□□ -0.3
HOXA3-201ENST00000317201 SYT14P1Q58G82 188 aa13.18□□□□□ -0.3
HOXA3-201ENST00000317201 WBP2NLQ6ICG8 309 aa13.18□□□□□ -0.3
HOXA3-201ENST00000317201 OR10K2Q6IF99 312 aa13.18□□□□□ -0.3
HOXA3-201ENST00000317201 LCN10Q6JVE6 187 aa13.18□□□□□ -0.3
HOXA3-201ENST00000317201 CD200R1LQ6Q8B3 271 aa13.18□□□□□ -0.3
HOXA3-201ENST00000317201 SHISA6Q6ZSJ9 500 aa13.18□□□□□ -0.3
HOXA3-201ENST00000317201 LSRQ86X29 649 aaPredicted RBP13.18□□□□□ -0.3
HOXA3-201ENST00000317201 THNSL2Q86YJ6 484 aa13.18□□□□□ -0.3
HOXA3-201ENST00000317201 GPR137CQ8N3F9 429 aa13.18□□□□□ -0.3
HOXA3-201ENST00000317201 GTPBP8Q8N3Z3 284 aaPredicted RBP13.18□□□□□ -0.3
HOXA3-201ENST00000317201 OR5L2Q8NGL0 311 aa13.18□□□□□ -0.3
HOXA3-201ENST00000317201 RGP1Q92546 391 aaPredicted RBP13.18□□□□□ -0.3
HOXA3-201ENST00000317201 ADOQ96SZ5 270 aa13.18□□□□□ -0.3
HOXA3-201ENST00000317201 NRIP2Q9BQI9 281 aa13.18□□□□□ -0.3
HOXA3-201ENST00000317201 RCC2Q9P258 522 aaKnown RBP13.18□□□□□ -0.3
HOXA3-201ENST00000317201 MSX1P28360 303 aa13.17□□□□□ -0.3
HOXA3-201ENST00000317201 MAGEB1P43366 347 aa13.17□□□□□ -0.3
HOXA3-201ENST00000317201 CDCP2Q5VXM1 449 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms