RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 HAO2Q9NYQ3 351 aa6.78□□□□□ -1.32
TRIM55-202ENST00000315962 NPIPA1Q9UND3 350 aa6.78□□□□□ -1.32
TRIM55-202ENST00000315962 FOXJ3Q9UPW0 622 aa6.78□□□□□ -1.32
TRIM55-202ENST00000315962 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 TMEM272A0A1B0GTI8 110 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 LOC101059948A0A1B0GTJ6 334 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 FTCDNL1E5RQL4 147 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 RP2O75695 350 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 DXOO77932 396 aaKnown RBP6.77□□□□□ -1.33
TRIM55-202ENST00000315962 F12P00748 615 aaPredicted RBP6.77□□□□□ -1.33
TRIM55-202ENST00000315962 BDH1Q02338 343 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 SRYQ05066 204 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 GFOD2Q3B7J2 385 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 EEF1A1P5Q5VTE0 462 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 METTL11BQ5VVY1 283 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 H1FNTQ75WM6 255 aaPredicted RBP6.77□□□□□ -1.33
TRIM55-202ENST00000315962 NUP54Q7Z3B4 507 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 IL22RA1Q8N6P7 574 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 DEFB124Q8NES8 71 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 OR2M3Q8NG83 312 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 LHFPL5Q8TAF8 219 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 THOC3Q96J01 351 aaKnown RBP6.77□□□□□ -1.33
TRIM55-202ENST00000315962 ZNF75AQ96N20 296 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 UQCC2Q9BRT2 126 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 WDR54Q9H977 334 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 SERINC1Q9NRX5 453 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 ADAMTS20P59510 1910 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 ZNF407Q9C0G0 2248 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 SULT2B1O00204 365 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 TOR1AO14656 332 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 TNFSF11O14788 317 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 ZNF254O75437 659 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 IGHV3-9P01782 118 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 GTF2F2P13984 249 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 ANOS1P23352 680 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 S100A11P31949 105 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 SSR4P51571 173 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 SEC61A1P61619 476 aaKnown RBP6.77□□□□□ -1.33
TRIM55-202ENST00000315962 ACTC1P68032 377 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 ACTA1P68133 377 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 EIF2B1Q14232 305 aaKnown RBP6.77□□□□□ -1.33
TRIM55-202ENST00000315962 ZNF273Q14593 569 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 RGS7BPQ6MZT1 257 aaPredicted RBP6.77□□□□□ -1.33
TRIM55-202ENST00000315962 DCXRQ7Z4W1 244 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 BIVMQ86UB2 503 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 BEST3Q8N1M1 668 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 ZNF676Q8N7Q3 588 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 POMGNT2Q8NAT1 580 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 PLPP7Q8NBV4 271 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 RNF166Q96A37 237 aaPredicted RBP6.77□□□□□ -1.33
TRIM55-202ENST00000315962 DDIT4LQ96D03 193 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 GPX7Q96SL4 187 aaPredicted RBP6.77□□□□□ -1.33
TRIM55-202ENST00000315962 WDR13Q9H1Z4 485 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 TXNIPQ9H3M7 391 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 PROK2Q9HC23 129 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 TCF7L1Q9HCS4 588 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 NPDC1Q9NQX5 325 aaPredicted RBP6.77□□□□□ -1.33
TRIM55-202ENST00000315962 SDHAF3Q9NRP4 125 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 ABRACLQ9P1F3 81 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 COPZ2Q9P299 210 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 PFDN2Q9UHV9 154 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 FARSAQ9Y285 508 aaKnown RBP6.77□□□□□ -1.33
TRIM55-202ENST00000315962 V9GY05 133 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 DNAJC13O75165 2243 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 TRAV18A0A075B6X5 111 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 LIPT2A6NK58 231 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 ZNF879B4DU55 563 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 OR2T1O43869 369 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 LMX1BO60663 402 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 CD3DP04234 171 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 BTF3P20290 206 aaKnown RBP6.77□□□□□ -1.33
TRIM55-202ENST00000315962 ALOX5APP20292 161 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 ZP3P21754 424 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 ITGA3P26006 1051 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 MFGE8Q08431 387 aaPredicted RBP6.77□□□□□ -1.33
TRIM55-202ENST00000315962 POU4F2Q12837 409 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 NKPD1Q17RQ9 610 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 PLA2G2CQ5R387 149 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 SEZ6L2Q6UXD5 910 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 PRSS35Q8N3Z0 413 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 LRRC18Q8N456 261 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 EXD3Q8N9H8 876 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 OR1J4Q8NGS1 313 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 OR5AK2Q8NH90 309 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 OR1S1Q8NH92 325 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 TMEM106AQ96A25 262 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 S100A16Q96FQ6 103 aaKnown RBP6.77□□□□□ -1.33
TRIM55-202ENST00000315962 STRADBQ9C0K7 418 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 PTGES2Q9H7Z7 377 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 EVA1AQ9H8M9 152 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 DEPPQ9NTK1 212 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 DCAF16Q9NXF7 216 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 EMC9Q9Y3B6 208 aa6.77□□□□□ -1.33
TRIM55-202ENST00000315962 A0A1B0GUH1 482 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 PINLYPA6NC86 204 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 GABARAPH6UMI1 98 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 UPK3AO75631 287 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 WDPCPO95876 746 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 MT-CO3P00414 261 aa6.76□□□□□ -1.33
TRIM55-202ENST00000315962 ANXA2P07355 339 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms