RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 C11orf87Q6NUJ2 197 aa13.34□□□□□ -0.27
TFE3-201ENST00000315869 SLC29A4Q7RTT9 530 aa13.34□□□□□ -0.27
TFE3-201ENST00000315869 GTPBP8Q8N3Z3 284 aaPredicted RBP13.34□□□□□ -0.27
TFE3-201ENST00000315869 OR1S2Q8NGQ3 325 aa13.34□□□□□ -0.27
TFE3-201ENST00000315869 RPS4Y2Q8TD47 263 aa13.34□□□□□ -0.27
TFE3-201ENST00000315869 PHB2Q99623 299 aa13.34□□□□□ -0.27
TFE3-201ENST00000315869 CLDN16Q9Y5I7 305 aa13.34□□□□□ -0.27
TFE3-201ENST00000315869 HS3ST3A1Q9Y663 406 aa13.34□□□□□ -0.27
TFE3-201ENST00000315869 GPR31O00270 319 aa13.34□□□□□ -0.27
TFE3-201ENST00000315869 MPIG6BO95866 241 aa13.34□□□□□ -0.27
TFE3-201ENST00000315869 ITGB2P05107 769 aa13.34□□□□□ -0.27
TFE3-201ENST00000315869 CD38P28907 300 aa13.34□□□□□ -0.27
TFE3-201ENST00000315869 IKZF1Q13422 519 aa13.34□□□□□ -0.27
TFE3-201ENST00000315869 SNTB1Q13884 538 aaKnown RBP13.34□□□□□ -0.27
TFE3-201ENST00000315869 AWAT2Q6E213 333 aa13.34□□□□□ -0.27
TFE3-201ENST00000315869 HAGHLQ6PII5 290 aaPredicted RBP13.34□□□□□ -0.27
TFE3-201ENST00000315869 CCDC36Q8IYA8 594 aa13.34□□□□□ -0.27
TFE3-201ENST00000315869 TMEM229BQ8NBD8 167 aa13.34□□□□□ -0.27
TFE3-201ENST00000315869 OR52N5Q8NH56 324 aa13.34□□□□□ -0.27
TFE3-201ENST00000315869 ELL3Q9HB65 397 aaPredicted RBP13.34□□□□□ -0.27
TFE3-201ENST00000315869 CUTCQ9NTM9 273 aa13.34□□□□□ -0.27
TFE3-201ENST00000315869 VSIG4Q9Y279 399 aa13.34□□□□□ -0.27
TFE3-201ENST00000315869 A0A1W2PPC1 479 aa13.33□□□□□ -0.27
TFE3-201ENST00000315869 SHISA8B8ZZ34 492 aa13.33□□□□□ -0.27
TFE3-201ENST00000315869 H7C2Y5 167 aa13.33□□□□□ -0.27
TFE3-201ENST00000315869 ZNF208O43345 1280 aa13.33□□□□□ -0.27
TFE3-201ENST00000315869 SYT7O43581 403 aa13.33□□□□□ -0.27
TFE3-201ENST00000315869 NAGAP17050 411 aa13.33□□□□□ -0.27
TFE3-201ENST00000315869 SLC6A8P48029 635 aa13.33□□□□□ -0.27
TFE3-201ENST00000315869 CARD17Q5XLA6 110 aa13.33□□□□□ -0.27
TFE3-201ENST00000315869 OR5M8Q8NGP6 311 aa13.33□□□□□ -0.27
TFE3-201ENST00000315869 HOXB13Q92826 284 aaPredicted RBP13.33□□□□□ -0.27
TFE3-201ENST00000315869 LAT2Q9GZY6 243 aa13.33□□□□□ -0.27
TFE3-201ENST00000315869 SLC25A32Q9H2D1 315 aa13.33□□□□□ -0.27
TFE3-201ENST00000315869 PCDHB10Q9UN67 800 aa13.33□□□□□ -0.27
TFE3-201ENST00000315869 MEGF11A6BM72 1044 aa13.33□□□□□ -0.28
TFE3-201ENST00000315869 BET1O15155 118 aa13.33□□□□□ -0.28
TFE3-201ENST00000315869 TXNDC12O95881 172 aa13.33□□□□□ -0.28
TFE3-201ENST00000315869 PDGFBP01127 241 aaPredicted RBP13.33□□□□□ -0.28
TFE3-201ENST00000315869 BGLAPP02818 100 aa13.33□□□□□ -0.28
TFE3-201ENST00000315869 CNR1P21554 472 aa13.33□□□□□ -0.28
TFE3-201ENST00000315869 CD96P40200 585 aa13.33□□□□□ -0.28
TFE3-201ENST00000315869 ARFRP1Q13795 201 aa13.33□□□□□ -0.28
TFE3-201ENST00000315869 MPPED2Q15777 294 aa13.33□□□□□ -0.28
TFE3-201ENST00000315869 ASPHD2Q6ICH7 369 aa13.33□□□□□ -0.28
TFE3-201ENST00000315869 NPRL2Q8WTW4 380 aa13.33□□□□□ -0.28
TFE3-201ENST00000315869 ASB12Q8WXK4 309 aa13.33□□□□□ -0.28
TFE3-201ENST00000315869 PRRT1Q99946 306 aa13.33□□□□□ -0.28
TFE3-201ENST00000315869 NKX6-2Q9C056 277 aaPredicted RBP13.33□□□□□ -0.28
TFE3-201ENST00000315869 TXNIPQ9H3M7 391 aa13.33□□□□□ -0.28
TFE3-201ENST00000315869 HTR3BO95264 441 aa13.33□□□□□ -0.28
TFE3-201ENST00000315869 AIMP2Q13155 320 aaKnown RBP13.33□□□□□ -0.28
TFE3-201ENST00000315869 MARCH1Q8TCQ1 289 aa13.33□□□□□ -0.28
TFE3-201ENST00000315869 TMED6Q8WW62 240 aa13.33□□□□□ -0.28
TFE3-201ENST00000315869 RHPN2P1A8MT19 583 aa13.32□□□□□ -0.28
TFE3-201ENST00000315869 F8W036 122 aa13.32□□□□□ -0.28
TFE3-201ENST00000315869 AGPAT2O15120 278 aa13.32□□□□□ -0.28
TFE3-201ENST00000315869 TMEM127O75204 238 aa13.32□□□□□ -0.28
TFE3-201ENST00000315869 GIMD1P0DJR0 217 aa13.32□□□□□ -0.28
TFE3-201ENST00000315869 PGAM2P15259 253 aa13.32□□□□□ -0.28
TFE3-201ENST00000315869 BLOC1S1P78537 153 aa13.32□□□□□ -0.28
TFE3-201ENST00000315869 SGCBQ16585 318 aa13.32□□□□□ -0.28
TFE3-201ENST00000315869 OR52N4Q8NGI2 321 aa13.32□□□□□ -0.28
TFE3-201ENST00000315869 OR13C8Q8NGS7 320 aa13.32□□□□□ -0.28
TFE3-201ENST00000315869 FOXRED1Q96CU9 486 aaPredicted RBP13.32□□□□□ -0.28
TFE3-201ENST00000315869 BANF2Q9H503 90 aa13.32□□□□□ -0.28
TFE3-201ENST00000315869 CNTD2Q9H8S5 307 aa13.32□□□□□ -0.28
TFE3-201ENST00000315869 SPTA1P02549 2419 aa13.32□□□□□ -0.28
TFE3-201ENST00000315869 PHF3Q92576 2039 aaKnown RBP13.32□□□□□ -0.28
TFE3-201ENST00000315869 ZNF705EA8MWA4 302 aaPredicted RBP13.32□□□□□ -0.28
TFE3-201ENST00000315869 CRABP1P29762 137 aa13.32□□□□□ -0.28
TFE3-201ENST00000315869 BDKRB2P30411 391 aa13.32□□□□□ -0.28
TFE3-201ENST00000315869 NPY4RP50391 375 aa13.32□□□□□ -0.28
TFE3-201ENST00000315869 TFAP2EQ6VUC0 442 aa13.32□□□□□ -0.28
TFE3-201ENST00000315869 ADAD2Q8NCV1 583 aaKnown RBP13.32□□□□□ -0.28
TFE3-201ENST00000315869 FAM71F1Q96KD3 344 aaPredicted RBP13.32□□□□□ -0.28
TFE3-201ENST00000315869 PELOQ9BRX2 385 aaKnown RBP13.32□□□□□ -0.28
TFE3-201ENST00000315869 PTGES2Q9H7Z7 377 aa13.32□□□□□ -0.28
TFE3-201ENST00000315869 PRMT8Q9NR22 394 aaPredicted RBP13.32□□□□□ -0.28
TFE3-201ENST00000315869 HPF1Q9NWY4 346 aa13.32□□□□□ -0.28
TFE3-201ENST00000315869 RASL12Q9NYN1 266 aa13.32□□□□□ -0.28
TFE3-201ENST00000315869 F12P00748 615 aaPredicted RBP13.32□□□□□ -0.28
TFE3-201ENST00000315869 ZNF20P17024 532 aa13.32□□□□□ -0.28
TFE3-201ENST00000315869 TLE3Q04726 772 aa13.32□□□□□ -0.28
TFE3-201ENST00000315869 PDSS1Q5T2R2 415 aa13.32□□□□□ -0.28
TFE3-201ENST00000315869 ACOT7LQ6ZUV0 252 aa13.32□□□□□ -0.28
TFE3-201ENST00000315869 RTN4RL2Q86UN3 420 aa13.32□□□□□ -0.28
TFE3-201ENST00000315869 OR5D18Q8NGL1 313 aa13.32□□□□□ -0.28
TFE3-201ENST00000315869 ARL5BQ96KC2 179 aa13.32□□□□□ -0.28
TFE3-201ENST00000315869 GAREM1Q9H706 876 aa13.32□□□□□ -0.28
TFE3-201ENST00000315869 CHMP1AQ9HD42 196 aaPredicted RBP13.32□□□□□ -0.28
TFE3-201ENST00000315869 BCL2L11O43521 198 aa13.31□□□□□ -0.28
TFE3-201ENST00000315869 FARS2O95363 451 aaKnown RBP13.31□□□□□ -0.28
TFE3-201ENST00000315869 SERPINF1P36955 418 aa13.31□□□□□ -0.28
TFE3-201ENST00000315869 CAPZBP47756 277 aa13.31□□□□□ -0.28
TFE3-201ENST00000315869 MECP2P51608 486 aaKnown RBP13.31□□□□□ -0.28
TFE3-201ENST00000315869 S100A10P60903 97 aa13.31□□□□□ -0.28
TFE3-201ENST00000315869 ANGPTL5Q86XS5 388 aa13.31□□□□□ -0.28
TFE3-201ENST00000315869 ADAMTS18Q8TE60 1221 aa13.31□□□□□ -0.28
TFE3-201ENST00000315869 MARC2Q969Z3 335 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms