RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 OR4C3Q8NH37 302 aa12.19□□□□□ -0.46
RFFL-201ENST00000315249 PAPLNO95428 1278 aa12.19□□□□□ -0.46
RFFL-201ENST00000315249 CSF3P09919 207 aa12.19□□□□□ -0.46
RFFL-201ENST00000315249 PRICKLE4Q2TBC4 344 aa12.19□□□□□ -0.46
RFFL-201ENST00000315249 PLA1AQ53H76 456 aa12.19□□□□□ -0.46
RFFL-201ENST00000315249 LRRC10Q5BKY1 277 aa12.19□□□□□ -0.46
RFFL-201ENST00000315249 ATPAF1Q5TC12 328 aaPredicted RBP12.19□□□□□ -0.46
RFFL-201ENST00000315249 CST9LP1Q5W188 147 aa12.19□□□□□ -0.46
RFFL-201ENST00000315249 OR2T35Q8NGX2 323 aa12.19□□□□□ -0.46
RFFL-201ENST00000315249 BEX5Q5H9J7 111 aa12.19□□□□□ -0.46
RFFL-201ENST00000315249 ZCCHC4Q9H5U6 513 aa12.19□□□□□ -0.46
RFFL-201ENST00000315249 GLTPQ9NZD2 209 aa12.19□□□□□ -0.46
RFFL-201ENST00000315249 ZNF391Q9UJN7 358 aa12.19□□□□□ -0.46
RFFL-201ENST00000315249 KIF13BQ9NQT8 1826 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 FAM221AA4D161 298 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 AGPAT2O15120 278 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 IL1AP01583 271 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 GPR12P47775 334 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 ADGRE4PQ86SQ3 457 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 OR5M11Q96RB7 305 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 HYAL3O43820 417 aaPredicted RBP12.18□□□□□ -0.46
RFFL-201ENST00000315249 CDONQ4KMG0 1287 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 CMTM4Q8IZR5 234 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 CARFQ8N187 725 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 M1APQ8TC57 530 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 HINT3Q9NQE9 182 aaKnown RBP12.18□□□□□ -0.46
RFFL-201ENST00000315249 TXNL4BQ9NX01 149 aaKnown RBP12.18□□□□□ -0.46
RFFL-201ENST00000315249 OSGIN2Q9Y236 505 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 MDFIC2A0A1B0GVS7 189 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 GABRA1P14867 456 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 RPS16P62249 146 aaKnown RBP12.18□□□□□ -0.46
RFFL-201ENST00000315249 MESP2Q0VG99 397 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 FAM219BQ5XKK7 198 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 CMC2Q9NRP2 79 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 MRPS18BQ9Y676 258 aaKnown RBP12.18□□□□□ -0.46
RFFL-201ENST00000315249 TUBAL3A6NHL2 446 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 ZNF117Q03924 483 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 MFGE8Q08431 387 aaPredicted RBP12.18□□□□□ -0.46
RFFL-201ENST00000315249 ISXQ2M1V0 245 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 DPPA2Q7Z7J5 298 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 NMNAT2Q9BZQ4 307 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 C1orf123Q9NWV4 160 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 CRYM-AS1A6NIL9 109 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 TSPAN15O95858 294 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 TNFRSF1AP19438 455 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 BAXQ07812 192 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 TFAP2EQ6VUC0 442 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 H2BFWTQ7Z2G1 175 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 RBMXL1Q96E39 390 aaKnown RBP12.18□□□□□ -0.46
RFFL-201ENST00000315249 MRPS24Q96EL2 167 aaKnown RBP12.18□□□□□ -0.46
RFFL-201ENST00000315249 SLCO1B1Q9Y6L6 691 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 C7orf72A4D263 438 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 ANKRD33BA6NCL7 494 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 M0QYG6 137 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 SCG5P05408 212 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 IGHV4-34P06331 123 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 CPEP16870 476 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 HTR2AP28223 471 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 STARD6P59095 220 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 ZNF768Q9H5H4 540 aaKnown RBP12.18□□□□□ -0.46
RFFL-201ENST00000315249 THADAQ6YHU6 1953 aa12.18□□□□□ -0.46
RFFL-201ENST00000315249 ELP2Q6IA86 826 aa12.17□□□□□ -0.46
RFFL-201ENST00000315249 DAZAP1Q96EP5 407 aaKnown RBP12.17□□□□□ -0.46
RFFL-201ENST00000315249 LOXL4Q96JB6 756 aa12.17□□□□□ -0.46
RFFL-201ENST00000315249 PRDM4Q9UKN5 801 aa12.17□□□□□ -0.46
RFFL-201ENST00000315249 DIMT1Q9UNQ2 313 aaKnown RBP12.17□□□□□ -0.46
RFFL-201ENST00000315249 SCN10AQ9Y5Y9 1956 aa12.17□□□□□ -0.46
RFFL-201ENST00000315249 ACHEP22303 614 aa12.17□□□□□ -0.46
RFFL-201ENST00000315249 ZNF674Q2M3X9 581 aa12.17□□□□□ -0.46
RFFL-201ENST00000315249 SAT2Q96F10 170 aaPredicted RBP12.17□□□□□ -0.46
RFFL-201ENST00000315249 PBOV1Q9GZY1 135 aa12.17□□□□□ -0.46
RFFL-201ENST00000315249 RAB1BQ9H0U4 201 aa12.17□□□□□ -0.46
RFFL-201ENST00000315249 SLC26A1Q9H2B4 701 aa12.17□□□□□ -0.46
RFFL-201ENST00000315249 PPIL3Q9H2H8 161 aaKnown RBP12.17□□□□□ -0.46
RFFL-201ENST00000315249 MOB1AQ9H8S9 216 aa12.17□□□□□ -0.46
RFFL-201ENST00000315249 TREM2Q9NZC2 230 aa12.17□□□□□ -0.46
RFFL-201ENST00000315249 ZNF254O75437 659 aa12.17□□□□□ -0.46
RFFL-201ENST00000315249 CD3EP07766 207 aa12.17□□□□□ -0.46
RFFL-201ENST00000315249 SFTPA2Q8IWL1 248 aa12.17□□□□□ -0.46
RFFL-201ENST00000315249 RPL3LQ92901 407 aaKnown RBP12.17□□□□□ -0.46
RFFL-201ENST00000315249 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.17□□□□□ -0.46
RFFL-201ENST00000315249 TMEM82A0PJX8 343 aa12.17□□□□□ -0.46
RFFL-201ENST00000315249 A6NHS1 94 aa12.17□□□□□ -0.46
RFFL-201ENST00000315249 NDUFB3O43676 98 aa12.17□□□□□ -0.46
RFFL-201ENST00000315249 OR8U8P0C7N1 319 aa12.17□□□□□ -0.46
RFFL-201ENST00000315249 UBBP0CG47 229 aa12.17□□□□□ -0.46
RFFL-201ENST00000315249 CCL2P13500 99 aa12.17□□□□□ -0.46
RFFL-201ENST00000315249 ARRB2P32121 409 aa12.17□□□□□ -0.46
RFFL-201ENST00000315249 TNFSF8P32971 234 aa12.17□□□□□ -0.46
RFFL-201ENST00000315249 LYPD4Q6UWN0 246 aa12.17□□□□□ -0.46
RFFL-201ENST00000315249 SLC25A26Q70HW3 274 aa12.17□□□□□ -0.46
RFFL-201ENST00000315249 MOB3BQ86TA1 216 aa12.17□□□□□ -0.46
RFFL-201ENST00000315249 ANKRD13BQ86YJ7 626 aa12.17□□□□□ -0.46
RFFL-201ENST00000315249 ASF1BQ9NVP2 202 aa12.17□□□□□ -0.46
RFFL-201ENST00000315249 RTL8BQ17RB0 113 aa12.17□□□□□ -0.46
RFFL-201ENST00000315249 KDM4DQ6B0I6 523 aa12.17□□□□□ -0.46
RFFL-201ENST00000315249 CCDC71Q8IV32 467 aaPredicted RBP12.17□□□□□ -0.46
RFFL-201ENST00000315249 OR6M1Q8NGM8 313 aa12.17□□□□□ -0.46
RFFL-201ENST00000315249 BCL7BQ9BQE9 202 aa12.17□□□□□ -0.46
RFFL-201ENST00000315249 IKZF5Q9H5V7 419 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms