RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 ZNF705EA8MWA4 302 aaPredicted RBP12.03□□□□□ -0.48
SKA3-202ENST00000314759 FARS2O95363 451 aaKnown RBP12.03□□□□□ -0.48
SKA3-202ENST00000314759 ERCC1P07992 297 aaPredicted RBP12.03□□□□□ -0.48
SKA3-202ENST00000314759 CD79AP11912 226 aa12.03□□□□□ -0.48
SKA3-202ENST00000314759 C1orf61Q13536 156 aa12.03□□□□□ -0.48
SKA3-202ENST00000314759 HABP2Q14520 560 aaPredicted RBP12.03□□□□□ -0.48
SKA3-202ENST00000314759 SGCBQ16585 318 aa12.03□□□□□ -0.48
SKA3-202ENST00000314759 C1orf100Q5SVJ3 147 aa12.03□□□□□ -0.48
SKA3-202ENST00000314759 KCTD9Q7L273 389 aa12.03□□□□□ -0.48
SKA3-202ENST00000314759 MAMDC2Q7Z304 686 aaPredicted RBP12.03□□□□□ -0.48
SKA3-202ENST00000314759 TRAPPC6BQ86SZ2 158 aa12.03□□□□□ -0.48
SKA3-202ENST00000314759 FBXO17Q96EF6 278 aa12.03□□□□□ -0.48
SKA3-202ENST00000314759 MICU1Q9BPX6 476 aa12.03□□□□□ -0.48
SKA3-202ENST00000314759 FBRSQ9HAH7 460 aa12.03□□□□□ -0.48
SKA3-202ENST00000314759 SPTBN5Q9NRC6 3674 aaKnown RBP12.03□□□□□ -0.48
SKA3-202ENST00000314759 GON4LQ3T8J9 2241 aa12.02□□□□□ -0.48
SKA3-202ENST00000314759 LOC107986453A0A1B0GWG9 222 aa12.02□□□□□ -0.48
SKA3-202ENST00000314759 TO15178 435 aa12.02□□□□□ -0.48
SKA3-202ENST00000314759 NUDT21O43809 227 aaKnown RBP12.02□□□□□ -0.48
SKA3-202ENST00000314759 STK17BO94768 372 aa12.02□□□□□ -0.48
SKA3-202ENST00000314759 SNAPINO95295 136 aa12.02□□□□□ -0.48
SKA3-202ENST00000314759 IFNA4P05014 189 aa12.02□□□□□ -0.48
SKA3-202ENST00000314759 VAMP1P23763 118 aa12.02□□□□□ -0.48
SKA3-202ENST00000314759 PHF19Q5T6S3 580 aa12.02□□□□□ -0.48
SKA3-202ENST00000314759 FAM109BQ6ICB4 259 aaPredicted RBP12.02□□□□□ -0.48
SKA3-202ENST00000314759 ETV3LQ6ZN32 361 aa12.02□□□□□ -0.48
SKA3-202ENST00000314759 PAQR4Q8N4S7 273 aaPredicted RBP12.02□□□□□ -0.48
SKA3-202ENST00000314759 OR10R2Q8NGX6 335 aa12.02□□□□□ -0.48
SKA3-202ENST00000314759 OR52N5Q8NH56 324 aa12.02□□□□□ -0.48
SKA3-202ENST00000314759 PTX4Q96A99 478 aa12.02□□□□□ -0.48
SKA3-202ENST00000314759 PIK3IP1Q96FE7 263 aa12.02□□□□□ -0.48
SKA3-202ENST00000314759 G6PC2Q9NQR9 355 aa12.02□□□□□ -0.48
SKA3-202ENST00000314759 PNO1Q9NRX1 252 aaKnown RBP12.02□□□□□ -0.48
SKA3-202ENST00000314759 UQCC1Q9NVA1 299 aa12.02□□□□□ -0.48
SKA3-202ENST00000314759 A0A0B4J2A0 478 aa12.02□□□□□ -0.49
SKA3-202ENST00000314759 EFSO43281 561 aa12.02□□□□□ -0.49
SKA3-202ENST00000314759 ZNF208O43345 1280 aa12.02□□□□□ -0.49
SKA3-202ENST00000314759 ZNF806P0C7X5 589 aa12.02□□□□□ -0.49
SKA3-202ENST00000314759 AKR1C4P17516 323 aa12.02□□□□□ -0.49
SKA3-202ENST00000314759 MPZP25189 248 aa12.02□□□□□ -0.49
SKA3-202ENST00000314759 AKT2P31751 481 aa12.02□□□□□ -0.49
SKA3-202ENST00000314759 ARRB1P49407 418 aaPredicted RBP12.02□□□□□ -0.49
SKA3-202ENST00000314759 NR0B1P51843 470 aaKnown RBP12.02□□□□□ -0.49
SKA3-202ENST00000314759 RBM39Q14498 530 aaKnown RBP12.02□□□□□ -0.49
SKA3-202ENST00000314759 TMPPEQ6ZT21 453 aa12.02□□□□□ -0.49
SKA3-202ENST00000314759 ZDHHC22Q8N966 263 aa12.02□□□□□ -0.49
SKA3-202ENST00000314759 PHOSPHO2Q8TCD6 241 aa12.02□□□□□ -0.49
SKA3-202ENST00000314759 NUDCD2Q8WVJ2 157 aa12.02□□□□□ -0.49
SKA3-202ENST00000314759 OR8D2Q9GZM6 311 aa12.02□□□□□ -0.49
SKA3-202ENST00000314759 TXNIPQ9H3M7 391 aa12.02□□□□□ -0.49
SKA3-202ENST00000314759 IGFLR1Q9H665 355 aa12.02□□□□□ -0.49
SKA3-202ENST00000314759 FN3KRPQ9HA64 309 aa12.02□□□□□ -0.49
SKA3-202ENST00000314759 SHPKQ9UHJ6 478 aa12.02□□□□□ -0.49
SKA3-202ENST00000314759 COA3Q9Y2R0 106 aaPredicted RBP12.02□□□□□ -0.49
SKA3-202ENST00000314759 R4GMQ9 66 aa12.02□□□□□ -0.49
SKA3-202ENST00000314759 LRP4O75096 1905 aa12.02□□□□□ -0.49
SKA3-202ENST00000314759 PCNX3Q9H6A9 2034 aa12.02□□□□□ -0.49
SKA3-202ENST00000314759 LOC101059948A0A1B0GTJ6 334 aa12.01□□□□□ -0.49
SKA3-202ENST00000314759 CDC14CA4D256 554 aa12.01□□□□□ -0.49
SKA3-202ENST00000314759 COLCA2A8K830 154 aa12.01□□□□□ -0.49
SKA3-202ENST00000314759 NUDT14O95848 222 aa12.01□□□□□ -0.49
SKA3-202ENST00000314759 ABOP16442 354 aa12.01□□□□□ -0.49
SKA3-202ENST00000314759 HRH1P35367 487 aa12.01□□□□□ -0.49
SKA3-202ENST00000314759 SLC6A8P48029 635 aa12.01□□□□□ -0.49
SKA3-202ENST00000314759 MST1LQ2TV78 715 aa12.01□□□□□ -0.49
SKA3-202ENST00000314759 ADAMTS18Q8TE60 1221 aa12.01□□□□□ -0.49
SKA3-202ENST00000314759 OIT3Q8WWZ8 545 aa12.01□□□□□ -0.49
SKA3-202ENST00000314759 ARL11Q969Q4 196 aa12.01□□□□□ -0.49
SKA3-202ENST00000314759 FOXRED1Q96CU9 486 aaPredicted RBP12.01□□□□□ -0.49
SKA3-202ENST00000314759 MAP3K3Q99759 626 aa12.01□□□□□ -0.49
SKA3-202ENST00000314759 NRSN2Q9GZP1 204 aa12.01□□□□□ -0.49
SKA3-202ENST00000314759 CNTD2Q9H8S5 307 aa12.01□□□□□ -0.49
SKA3-202ENST00000314759 MYO15AQ9UKN7 3530 aa12.01□□□□□ -0.49
SKA3-202ENST00000314759 SPEGQ15772 3267 aa12.01□□□□□ -0.49
SKA3-202ENST00000314759 METTL21EPA6NDL7 271 aa12.01□□□□□ -0.49
SKA3-202ENST00000314759 F8VVB4 439 aa12.01□□□□□ -0.49
SKA3-202ENST00000314759 F8VWA3 439 aa12.01□□□□□ -0.49
SKA3-202ENST00000314759 CA3P07451 260 aa12.01□□□□□ -0.49
SKA3-202ENST00000314759 RAB6AP20340 208 aa12.01□□□□□ -0.49
SKA3-202ENST00000314759 GFOD2Q3B7J2 385 aa12.01□□□□□ -0.49
SKA3-202ENST00000314759 CHST4Q8NCG5 386 aa12.01□□□□□ -0.49
SKA3-202ENST00000314759 ELP5Q8TE02 316 aa12.01□□□□□ -0.49
SKA3-202ENST00000314759 RRNAD1Q96FB5 475 aaKnown RBP12.01□□□□□ -0.49
SKA3-202ENST00000314759 ZC3H10Q96K80 434 aaKnown RBP12.01□□□□□ -0.49
SKA3-202ENST00000314759 TMEM100Q9NV29 134 aa12.01□□□□□ -0.49
SKA3-202ENST00000314759 OR52A1Q9UKL2 312 aa12.01□□□□□ -0.49
SKA3-202ENST00000314759 TDRD6O60522 2096 aaKnown RBP12.01□□□□□ -0.49
SKA3-202ENST00000314759 C13orf42A0A1B0GVH6 325 aa12□□□□□ -0.49
SKA3-202ENST00000314759 EIF1AYO14602 144 aaKnown RBP12□□□□□ -0.49
SKA3-202ENST00000314759 SEC16AO15027 2179 aa12□□□□□ -0.49
SKA3-202ENST00000314759 DXOO77932 396 aaKnown RBP12□□□□□ -0.49
SKA3-202ENST00000314759 MT-ATP6P00846 226 aa12□□□□□ -0.49
SKA3-202ENST00000314759 ISG15P05161 165 aa12□□□□□ -0.49
SKA3-202ENST00000314759 CRHP06850 196 aa12□□□□□ -0.49
SKA3-202ENST00000314759 PSMB6P28072 239 aa12□□□□□ -0.49
SKA3-202ENST00000314759 EIF1AXP47813 144 aaKnown RBP12□□□□□ -0.49
SKA3-202ENST00000314759 GLO1Q04760 184 aa12□□□□□ -0.49
SKA3-202ENST00000314759 UNC119Q13432 240 aa12□□□□□ -0.49
SKA3-202ENST00000314759 AKIRIN2Q53H80 203 aa12□□□□□ -0.49
SKA3-202ENST00000314759 NKAPLQ5M9Q1 402 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms