RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 CLEC18AA5D8T8 446 aa12.28□□□□□ -0.44
TRIM56-201ENST00000306085 PRSS1P07477 247 aa12.28□□□□□ -0.44
TRIM56-201ENST00000306085 ZNF140P52738 457 aaPredicted RBP12.28□□□□□ -0.44
TRIM56-201ENST00000306085 KIR2DS3Q14952 304 aa12.28□□□□□ -0.44
TRIM56-201ENST00000306085 CLEC18CQ8NCF0 446 aa12.28□□□□□ -0.44
TRIM56-201ENST00000306085 CHST14Q8NCH0 376 aa12.28□□□□□ -0.44
TRIM56-201ENST00000306085 NDRG3Q9UGV2 375 aa12.28□□□□□ -0.44
TRIM56-201ENST00000306085 MOKQ9UQ07 419 aa12.28□□□□□ -0.44
TRIM56-201ENST00000306085 IGLV3-22A0A075B6J6 115 aa12.28□□□□□ -0.44
TRIM56-201ENST00000306085 ALX3O95076 343 aa12.28□□□□□ -0.44
TRIM56-201ENST00000306085 RHOBP62745 196 aa12.28□□□□□ -0.44
TRIM56-201ENST00000306085 ELOBQ15370 118 aa12.28□□□□□ -0.44
TRIM56-201ENST00000306085 CTSFQ9UBX1 484 aa12.28□□□□□ -0.44
TRIM56-201ENST00000306085 DNASE2O00115 360 aaPredicted RBP12.28□□□□□ -0.44
TRIM56-201ENST00000306085 ALPLP05186 524 aa12.28□□□□□ -0.44
TRIM56-201ENST00000306085 PIGAP37287 484 aa12.28□□□□□ -0.44
TRIM56-201ENST00000306085 CNTD2Q9H8S5 307 aa12.28□□□□□ -0.44
TRIM56-201ENST00000306085 LMTK2Q8IWU2 1503 aa12.28□□□□□ -0.44
TRIM56-201ENST00000306085 HENMT1Q5T8I9 393 aaKnown RBP12.28□□□□□ -0.44
TRIM56-201ENST00000306085 OR13F1Q8NGS4 319 aa12.28□□□□□ -0.44
TRIM56-201ENST00000306085 SPACA9Q96E40 222 aaPredicted RBP12.28□□□□□ -0.44
TRIM56-201ENST00000306085 ATG101Q9BSB4 218 aa12.28□□□□□ -0.44
TRIM56-201ENST00000306085 TAS2R4Q9NYW5 299 aa12.28□□□□□ -0.44
TRIM56-201ENST00000306085 SALL3Q9BXA9 1300 aa12.28□□□□□ -0.44
TRIM56-201ENST00000306085 MEIKINA0A087WXM9 373 aa12.28□□□□□ -0.44
TRIM56-201ENST00000306085 LRP3O75074 770 aa12.28□□□□□ -0.44
TRIM56-201ENST00000306085 ZNF429Q86V71 674 aa12.28□□□□□ -0.44
TRIM56-201ENST00000306085 SELEP16581 610 aa12.28□□□□□ -0.44
TRIM56-201ENST00000306085 TCN2P20062 427 aa12.28□□□□□ -0.44
TRIM56-201ENST00000306085 OR1N2Q8NGR9 330 aa12.28□□□□□ -0.44
TRIM56-201ENST00000306085 WRAP73Q9P2S5 460 aaPredicted RBP12.28□□□□□ -0.44
TRIM56-201ENST00000306085 ONECUT1Q9UBC0 465 aa12.28□□□□□ -0.44
TRIM56-201ENST00000306085 GJC3Q8NFK1 279 aa12.27□□□□□ -0.44
TRIM56-201ENST00000306085 LPAR5Q9H1C0 372 aa12.27□□□□□ -0.44
TRIM56-201ENST00000306085 UNCXA6NJT0 531 aa12.27□□□□□ -0.44
TRIM56-201ENST00000306085 ORM1P02763 201 aa12.27□□□□□ -0.44
TRIM56-201ENST00000306085 DYNC2LI1Q8TCX1 351 aa12.27□□□□□ -0.44
TRIM56-201ENST00000306085 TTC9Q92623 222 aa12.27□□□□□ -0.44
TRIM56-201ENST00000306085 EPHX3Q9H6B9 360 aa12.27□□□□□ -0.44
TRIM56-201ENST00000306085 HRH1P35367 487 aa12.27□□□□□ -0.44
TRIM56-201ENST00000306085 EMP1P54849 157 aa12.27□□□□□ -0.44
TRIM56-201ENST00000306085 KCNJ10P78508 379 aa12.27□□□□□ -0.44
TRIM56-201ENST00000306085 ZNF485Q8NCK3 441 aa12.27□□□□□ -0.44
TRIM56-201ENST00000306085 OR52L2PQ8NGH6 319 aa12.27□□□□□ -0.44
TRIM56-201ENST00000306085 DUSP23Q9BVJ7 150 aa12.27□□□□□ -0.44
TRIM56-201ENST00000306085 NDUFB11Q9NX14 153 aa12.27□□□□□ -0.44
TRIM56-201ENST00000306085 NAT2P11245 290 aa12.27□□□□□ -0.44
TRIM56-201ENST00000306085 PSMB6P28072 239 aa12.27□□□□□ -0.44
TRIM56-201ENST00000306085 KLRB1Q12918 225 aa12.27□□□□□ -0.44
TRIM56-201ENST00000306085 SLC16A12Q6ZSM3 486 aa12.27□□□□□ -0.44
TRIM56-201ENST00000306085 MBOAT2Q6ZWT7 520 aa12.27□□□□□ -0.44
TRIM56-201ENST00000306085 TMEFF1Q8IYR6 380 aa12.27□□□□□ -0.44
TRIM56-201ENST00000306085 ZNF778Q96MU6 729 aa12.27□□□□□ -0.44
TRIM56-201ENST00000306085 CD37P11049 281 aa12.27□□□□□ -0.45
TRIM56-201ENST00000306085 LSM11P83369 360 aaKnown RBP eCLIP12.27□□□□□ -0.45
TRIM56-201ENST00000306085 CIB3Q96Q77 187 aaPredicted RBP12.27□□□□□ -0.45
TRIM56-201ENST00000306085 TNFRSF13CQ96RJ3 184 aa12.27□□□□□ -0.45
TRIM56-201ENST00000306085 ING1Q9UK53 422 aaPredicted RBP12.27□□□□□ -0.45
TRIM56-201ENST00000306085 NXNL2Q5VZ03 156 aa12.27□□□□□ -0.45
TRIM56-201ENST00000306085 OR52E1Q8NGJ3 308 aa12.27□□□□□ -0.45
TRIM56-201ENST00000306085 NTNG1Q9Y2I2 539 aa12.27□□□□□ -0.45
TRIM56-201ENST00000306085 G3V2L1 256 aa12.27□□□□□ -0.45
TRIM56-201ENST00000306085 OR2J2O76002 312 aa12.27□□□□□ -0.45
TRIM56-201ENST00000306085 ZNF789Q5FWF6 425 aa12.27□□□□□ -0.45
TRIM56-201ENST00000306085 CLDN22Q8N7P3 220 aa12.27□□□□□ -0.45
TRIM56-201ENST00000306085 MISP3Q96FF7 219 aa12.27□□□□□ -0.45
TRIM56-201ENST00000306085 A0A0U1RQS6 177 aa12.27□□□□□ -0.45
TRIM56-201ENST00000306085 SUOXP51687 545 aa12.27□□□□□ -0.45
TRIM56-201ENST00000306085 C21orf58P58505 322 aa12.27□□□□□ -0.45
TRIM56-201ENST00000306085 RHOFQ9HBH0 211 aa12.27□□□□□ -0.45
TRIM56-201ENST00000306085 UTS2O95399 124 aa12.27□□□□□ -0.45
TRIM56-201ENST00000306085 HIST1H1TP22492 207 aaPredicted RBP12.27□□□□□ -0.45
TRIM56-201ENST00000306085 PSMB5P28074 263 aa12.27□□□□□ -0.45
TRIM56-201ENST00000306085 RRADP55042 308 aa12.27□□□□□ -0.45
TRIM56-201ENST00000306085 TTC32Q5I0X7 151 aa12.27□□□□□ -0.45
TRIM56-201ENST00000306085 CLLU1Q5K131 121 aa12.27□□□□□ -0.45
TRIM56-201ENST00000306085 UBALD1Q8TB05 177 aa12.27□□□□□ -0.45
TRIM56-201ENST00000306085 SDHAP31040 664 aa12.26□□□□□ -0.45
TRIM56-201ENST00000306085 RPS19P39019 145 aaKnown RBP12.26□□□□□ -0.45
TRIM56-201ENST00000306085 CCL11P51671 97 aa12.26□□□□□ -0.45
TRIM56-201ENST00000306085 FAM3AP98173 230 aa12.26□□□□□ -0.45
TRIM56-201ENST00000306085 FRMPD2BQ6IN97 320 aa12.26□□□□□ -0.45
TRIM56-201ENST00000306085 FITM1A5D6W6 292 aa12.26□□□□□ -0.45
TRIM56-201ENST00000306085 HTR1FP30939 366 aa12.26□□□□□ -0.45
TRIM56-201ENST00000306085 TMEM267Q0VDI3 215 aaPredicted RBP12.26□□□□□ -0.45
TRIM56-201ENST00000306085 OR5M1Q8NGP8 315 aa12.26□□□□□ -0.45
TRIM56-201ENST00000306085 ZNF480Q8WV37 535 aa12.26□□□□□ -0.45
TRIM56-201ENST00000306085 MARCH5Q9NX47 278 aa12.26□□□□□ -0.45
TRIM56-201ENST00000306085 OR51B4Q9Y5P0 310 aa12.26□□□□□ -0.45
TRIM56-201ENST00000306085 ATP23Q9Y6H3 246 aa12.26□□□□□ -0.45
TRIM56-201ENST00000306085 SDCBPO00560 298 aaPredicted RBP12.26□□□□□ -0.45
TRIM56-201ENST00000306085 HOXC11O43248 304 aaPredicted RBP12.26□□□□□ -0.45
TRIM56-201ENST00000306085 SLC25A5P05141 298 aaKnown RBP12.26□□□□□ -0.45
TRIM56-201ENST00000306085 CRYBA1P05813 215 aa12.26□□□□□ -0.45
TRIM56-201ENST00000306085 CSF2RBP32927 897 aa12.26□□□□□ -0.45
TRIM56-201ENST00000306085 HOXD13P35453 343 aa12.26□□□□□ -0.45
TRIM56-201ENST00000306085 MYPOPQ86VE0 399 aaPredicted RBP12.26□□□□□ -0.45
TRIM56-201ENST00000306085 MFSD4AQ8N468 514 aa12.26□□□□□ -0.45
TRIM56-201ENST00000306085 GPA33Q99795 319 aa12.26□□□□□ -0.45
TRIM56-201ENST00000306085 TSPAN31Q12999 210 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms