RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 CBX3Q13185 183 aa17.15■□□□□ 0.34
HOXC4-201ENST00000303406 SGCAQ16586 387 aa17.15■□□□□ 0.34
HOXC4-201ENST00000303406 SPINK14Q6IE38 97 aa17.15■□□□□ 0.34
HOXC4-201ENST00000303406 BTN2A1Q7KYR7 527 aa17.15■□□□□ 0.34
HOXC4-201ENST00000303406 ADGRE4PQ86SQ3 457 aa17.15■□□□□ 0.34
HOXC4-201ENST00000303406 LUZP2Q86TE4 346 aa17.15■□□□□ 0.34
HOXC4-201ENST00000303406 OR10D3Q8NH80 312 aa17.15■□□□□ 0.34
HOXC4-201ENST00000303406 UBASH3BQ8TF42 649 aa17.15■□□□□ 0.34
HOXC4-201ENST00000303406 SORCS2Q96PQ0 1159 aa17.15■□□□□ 0.34
HOXC4-201ENST00000303406 UQCC2Q9BRT2 126 aa17.15■□□□□ 0.34
HOXC4-201ENST00000303406 ZNF703Q9H7S9 590 aaPredicted RBP17.15■□□□□ 0.34
HOXC4-201ENST00000303406 RHBDD3Q9Y3P4 386 aa17.15■□□□□ 0.34
HOXC4-201ENST00000303406 CIB4A0PJX0 185 aa17.14■□□□□ 0.33
HOXC4-201ENST00000303406 RER1O15258 196 aa17.14■□□□□ 0.33
HOXC4-201ENST00000303406 CXCL13O43927 109 aa17.14■□□□□ 0.33
HOXC4-201ENST00000303406 CYTIPO60759 359 aa17.14■□□□□ 0.33
HOXC4-201ENST00000303406 ERCC1P07992 297 aaPredicted RBP17.14■□□□□ 0.33
HOXC4-201ENST00000303406 RAB6AP20340 208 aa17.14■□□□□ 0.33
HOXC4-201ENST00000303406 CX3CR1P49238 355 aa17.14■□□□□ 0.33
HOXC4-201ENST00000303406 ZNF121P58317 390 aaPredicted RBP17.14■□□□□ 0.33
HOXC4-201ENST00000303406 OR1C1Q15619 314 aa17.14■□□□□ 0.33
HOXC4-201ENST00000303406 FAM27BQ5VT28 67 aa17.14■□□□□ 0.33
HOXC4-201ENST00000303406 ZNF813Q6ZN06 617 aa17.14■□□□□ 0.33
HOXC4-201ENST00000303406 DOK3Q7L591 496 aa17.14■□□□□ 0.33
HOXC4-201ENST00000303406 OR1M1Q8NGA1 313 aa17.14■□□□□ 0.33
HOXC4-201ENST00000303406 OR5D14Q8NGL3 314 aa17.14■□□□□ 0.33
HOXC4-201ENST00000303406 TMEM45BQ96B21 275 aa17.14■□□□□ 0.33
HOXC4-201ENST00000303406 FGGYQ96C11 551 aa17.14■□□□□ 0.33
HOXC4-201ENST00000303406 CACNG6Q9BXT2 260 aa17.14■□□□□ 0.33
HOXC4-201ENST00000303406 TMEM138Q9NPI0 162 aa17.14■□□□□ 0.33
HOXC4-201ENST00000303406 TAS2R8Q9NYW2 309 aa17.14■□□□□ 0.33
HOXC4-201ENST00000303406 IL17BQ9UHF5 180 aa17.14■□□□□ 0.33
HOXC4-201ENST00000303406 GPR179Q6PRD1 2367 aa17.14■□□□□ 0.33
HOXC4-201ENST00000303406 NCKAP5O14513 1909 aa17.13■□□□□ 0.33
HOXC4-201ENST00000303406 SULT1C2O00338 296 aa17.13■□□□□ 0.33
HOXC4-201ENST00000303406 IGLV3-1P01715 115 aa17.13■□□□□ 0.33
HOXC4-201ENST00000303406 RNASE12Q5GAN4 147 aaKnown RBP17.13■□□□□ 0.33
HOXC4-201ENST00000303406 GLYATL3Q5SZD4 288 aa17.13■□□□□ 0.33
HOXC4-201ENST00000303406 RIPPLY2Q5TAB7 128 aa17.13■□□□□ 0.33
HOXC4-201ENST00000303406 PGAP1Q75T13 922 aa17.13■□□□□ 0.33
HOXC4-201ENST00000303406 DTX1Q86Y01 620 aa17.13■□□□□ 0.33
HOXC4-201ENST00000303406 TCTE3Q8IZS6 198 aa17.13■□□□□ 0.33
HOXC4-201ENST00000303406 OR8B12Q8NGG6 310 aa17.13■□□□□ 0.33
HOXC4-201ENST00000303406 OR51A2Q8NGJ7 313 aa17.13■□□□□ 0.33
HOXC4-201ENST00000303406 OR1J2Q8NGS2 313 aa17.13■□□□□ 0.33
HOXC4-201ENST00000303406 CPT1CQ8TCG5 803 aa17.13■□□□□ 0.33
HOXC4-201ENST00000303406 SCMH1Q96GD3 660 aa17.13■□□□□ 0.33
HOXC4-201ENST00000303406 SIGLEC12Q96PQ1 595 aa17.13■□□□□ 0.33
HOXC4-201ENST00000303406 TRAF4Q9BUZ4 470 aaPredicted RBP17.13■□□□□ 0.33
HOXC4-201ENST00000303406 HRASLSQ9HDD0 168 aa17.13■□□□□ 0.33
HOXC4-201ENST00000303406 PARD6AQ9NPB6 346 aa17.13■□□□□ 0.33
HOXC4-201ENST00000303406 EMC3Q9P0I2 261 aa17.13■□□□□ 0.33
HOXC4-201ENST00000303406 DOCK10Q96BY6 2186 aa17.13■□□□□ 0.33
HOXC4-201ENST00000303406 CACNA1CQ13936 2221 aa17.12■□□□□ 0.33
HOXC4-201ENST00000303406 H7C417 338 aa17.12■□□□□ 0.33
HOXC4-201ENST00000303406 TMIGD3P0DMS9 266 aaPredicted RBP17.12■□□□□ 0.33
HOXC4-201ENST00000303406 RAB3AP20336 220 aa17.12■□□□□ 0.33
HOXC4-201ENST00000303406 GIFP27352 417 aa17.12■□□□□ 0.33
HOXC4-201ENST00000303406 OTX1P32242 354 aaPredicted RBP17.12■□□□□ 0.33
HOXC4-201ENST00000303406 PRKXP51817 358 aa17.12■□□□□ 0.33
HOXC4-201ENST00000303406 EFNB2P52799 333 aa17.12■□□□□ 0.33
HOXC4-201ENST00000303406 CLDN15P56746 228 aa17.12■□□□□ 0.33
HOXC4-201ENST00000303406 SOX8P57073 446 aa17.12■□□□□ 0.33
HOXC4-201ENST00000303406 RRAS2P62070 204 aaPredicted RBP17.12■□□□□ 0.33
HOXC4-201ENST00000303406 PLA2G7Q13093 441 aa17.12■□□□□ 0.33
HOXC4-201ENST00000303406 HYAL4Q2M3T9 481 aa17.12■□□□□ 0.33
HOXC4-201ENST00000303406 Q6ZSR3 168 aa17.12■□□□□ 0.33
HOXC4-201ENST00000303406 GPR137CQ8N3F9 429 aa17.12■□□□□ 0.33
HOXC4-201ENST00000303406 ZNF283Q8N7M2 679 aa17.12■□□□□ 0.33
HOXC4-201ENST00000303406 CLEC1AQ8NC01 280 aa17.12■□□□□ 0.33
HOXC4-201ENST00000303406 AKAP1Q92667 903 aaKnown RBP eCLIP17.12■□□□□ 0.33
HOXC4-201ENST00000303406 PHF21AQ96BD5 680 aa17.12■□□□□ 0.33
HOXC4-201ENST00000303406 RBM24Q9BX46 236 aaKnown RBP17.12■□□□□ 0.33
HOXC4-201ENST00000303406 METTL17Q9H7H0 456 aaPredicted RBP17.12■□□□□ 0.33
HOXC4-201ENST00000303406 NEK6Q9HC98 313 aa17.12■□□□□ 0.33
HOXC4-201ENST00000303406 FBLN5Q9UBX5 448 aa17.12■□□□□ 0.33
HOXC4-201ENST00000303406 MTFP1Q9UDX5 166 aa17.12■□□□□ 0.33
HOXC4-201ENST00000303406 IGKV3D-15A0A087WSY6 115 aa17.11■□□□□ 0.33
HOXC4-201ENST00000303406 LMX1BO60663 402 aa17.11■□□□□ 0.33
HOXC4-201ENST00000303406 CST2P09228 141 aa17.11■□□□□ 0.33
HOXC4-201ENST00000303406 ZNF20P17024 532 aa17.11■□□□□ 0.33
HOXC4-201ENST00000303406 SPOCK1Q08629 439 aa17.11■□□□□ 0.33
HOXC4-201ENST00000303406 STK11Q15831 433 aa17.11■□□□□ 0.33
HOXC4-201ENST00000303406 KCNJ8Q15842 424 aa17.11■□□□□ 0.33
HOXC4-201ENST00000303406 AAED1Q7RTV5 226 aa17.11■□□□□ 0.33
HOXC4-201ENST00000303406 SULF2Q8IWU5 870 aa17.11■□□□□ 0.33
HOXC4-201ENST00000303406 SLC22A24Q8N4F4 322 aa17.11■□□□□ 0.33
HOXC4-201ENST00000303406 IL22RA1Q8N6P7 574 aa17.11■□□□□ 0.33
HOXC4-201ENST00000303406 OR56B4Q8NH76 319 aa17.11■□□□□ 0.33
HOXC4-201ENST00000303406 OR51E1Q8TCB6 317 aa17.11■□□□□ 0.33
HOXC4-201ENST00000303406 ADAT3Q96EY9 351 aaPredicted RBP17.11■□□□□ 0.33
HOXC4-201ENST00000303406 CGGBP1Q9UFW8 167 aaPredicted RBP17.11■□□□□ 0.33
HOXC4-201ENST00000303406 KLF13Q9Y2Y9 288 aaPredicted RBP17.11■□□□□ 0.33
HOXC4-201ENST00000303406 PHF3Q92576 2039 aaKnown RBP17.11■□□□□ 0.33
HOXC4-201ENST00000303406 A0A0U1RQV5 110 aa17.11■□□□□ 0.33
HOXC4-201ENST00000303406 STARP49675 285 aa17.11■□□□□ 0.33
HOXC4-201ENST00000303406 BCL2A1Q16548 175 aa17.11■□□□□ 0.33
HOXC4-201ENST00000303406 ZFP69Q49AA0 526 aa17.11■□□□□ 0.33
HOXC4-201ENST00000303406 CCDC92Q53HC0 331 aaPredicted RBP17.11■□□□□ 0.33
HOXC4-201ENST00000303406 JAGN1Q8N5M9 183 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms